BDGP Sequence Production Resources |
Search the DGRC for LD40460
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 404 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | Sam-S-RA |
Protein status: | LD40460.pep: gold |
Preliminary Size: | 2341 |
Sequenced Size: | 2085 |
Gene | Date | Evidence |
---|---|---|
CG2674 | 2001-01-01 | Release 2 assignment |
CG2674 | 2001-07-04 | Blastp of sequenced clone |
CG2674 | 2003-01-01 | Sim4 clustering to Release 3 |
M(2)21AB | 2008-04-29 | Release 5.5 accounting |
M(2)21AB | 2008-08-15 | Release 5.9 accounting |
M(2)21AB | 2008-12-18 | 5.12 accounting |
2085 bp (2085 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051918
> LD40460.complete TCGCTAAGATAGGACGTGTGTTGGCTGCGCCGCTGATTTGGTTGCCGTCG CTGAACCAGTATAACTCAGAATCACTCCACCAACAATTTAGCCGACCGGA ACTCGGGTTATAGCACTGCTCCCCCATTGCCCCTTCAAACTTCGAGTTAC ATATTACAAACTACCCATCAACATGCCGCAAAAGACAAACGGACATAGCG CCAACGGATGCAACGGCAGCAATGGCAACTCATATGACATGGAAGACGGA GCTACATTCCTGTTCACTTCCGAGTCCGTTGGCGAGGGTCATCCAGACAA AATGTGCGACCAAATCAGCGACGCTATCTTGGATGCCCATCTGAAGCAGG ATCCAAACGCGAAGGTGGCGTGTGAAACCGTCGCCAAGACGGGCATGATT CTGCTGTGCGGCGAGATCACGTCTAAGGCTGTGGTCGACTACCAGAAGGT TGTTCGTGAGACAGTGCAGCACATTGGTTATGATGACTCCTCCAAGGGTT TCGATTTCAAAACGTGCAATGTGCTGTTGGCATTGGACCAACAATCGCCT GAGATCGCTGCGGGAGTGCATGTCAACCGTGCCGAGGAAGAGATCGGTGC CGGAGATCAGGGTATCATGTTTGGATATGCCACCGACGAAACCGAGGAAT GTATGCCCCTAACCGTCGTTTTGGCTCACAAACTAAACGAAAAGATTGCT GAGCTGCGTCGCTCAGATGTGTTCTGGTGGGCTCGCCCCGATTCCAAAAC ACAAGTAACCTGCGAGTACCTCTTCAATCAGGGATCAGCAGTTCCCAAGC GTGTCCACACTATTGTAGTGTCCATGCAGCATTCTGAAAAGATATCGTTA GAAACCCTGCGCTCGGAAGTAATGGAGAAAGTTGTTAAAGTAGTCATTCC CGCCAAATACATTGATGCCAACACCATTGTCCACATCAATCCTTGTGGGC TTTTTGTAATCGGTGGACCAATGGGTGACGCTGGGCTTACAGGAAGAAAA ATCATTGTAGATACTTACGGAGGCTGGGGCGCCCACGGCGGCGGTGCATT CTCTGGCAAGGACTTCACCAAGGTTGACAGATCAGCTGCATATGCAGCAC GCTGGGTGGCCAAATCACTGGTTAAGGCCGGTCTCTGCAAGCGCTGCCTT GTCCAAGTGTCCTACGCCATAGGTCTTGCTGAGCCTCTCTCCATAACTGT GTTCGACTACGGAACTTCTCACAAGTCACAAAAAGAACTTCTGGATATCA TCCGTCGAAACTTTGACCTCAGGCCCGGCAAGATTGTCAAGGACCTAAAC CTGCGCCAGCCGATATACCAGCGAACAAGCACTTATGGACACTTCGGTCG CGCGGGCTTCTCGTGGGAGGAGGCCAAGCCTCTGGAGATTGACAACTGAC TAGACGCTGAAGCGTTGCAACCGCAGTCACCATATGCTAAAAGGTCGAAG CTATCCTTATATTCATCAGCGTCAAAATTAACAGATACCCAAGCACCAAC GTAATTTTTAGTGTCGTTTTTAAAGCCTAAAGTCAGAGGAGAAGGCGGCA TAGGCTTGCCAACTCTTATGGGCTTTCTTCTCTAACTTATGCTGTGCTCT TCGCTATATAATTTAAACCATTCTGATGTGTGTAGTCTTCTCACACGGAA CTAGTTTTAGTCGTCTTAATACCCGCATATATACCTAATAGAGAGCTCCA AAAGAATTGATGAGCTTTAGTTATGCATATACATAGTATAGTGTCGGTCA GTTCAGTAAAAATTAAAGCAGTAGTTAGTACCTCCTTCAATTATCATGCA ACTTAATTATGTTGGTGTCTATGGAAATTGTATAAAACAATTAAATCCGT TGCCTAGAAATTATGCAACATTCTCATGTCCCCATTGTAAACTTATTTTT GTCTCTTTTAACATTTCTATTTGTTGTATGCGTTGTATATGTTAAACCTA AAGTTTTAAACAACTCGATTGTATGTACATTACACTCTGTCTTTGTATTT TCTGTAACCAACCATAAGATAATGTATTTTCCTTTACAAAAATATATTAA AGATAAATATGAAAAGTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
M(2)21AB-RF | 2682 | M(2)21AB-RF | 393..2460 | 1..2068 | 10340 | 100 | Plus |
M(2)21AB-RH | 2681 | M(2)21AB-RH | 393..2460 | 1..2068 | 10340 | 100 | Plus |
M(2)21AB-RI | 2802 | M(2)21AB-RI | 587..2580 | 75..2068 | 9970 | 100 | Plus |
M(2)21AB-RI | 2802 | M(2)21AB-RI | 393..466 | 1..74 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 113471..114247 | 1291..2067 | 3870 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 112724..113407 | 608..1291 | 3420 | 100 | Plus |
chr2L | 23010047 | chr2L | 108625..108846 | 75..296 | 1110 | 100 | Plus |
chr2L | 23010047 | chr2L | 110791..110916 | 374..499 | 630 | 100 | Plus |
chr2L | 23010047 | chr2L | 111943..112057 | 497..611 | 575 | 100 | Plus |
chr2L | 23010047 | chr2L | 110441..110520 | 295..374 | 400 | 100 | Plus |
chr2L | 23010047 | chr2L | 108190..108263 | 1..74 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 113434..114211 | 1291..2068 | 3890 | 100 | Plus |
2L | 23513712 | 2L | 112687..113370 | 608..1291 | 3420 | 100 | Plus |
2L | 23513712 | 2L | 108588..108809 | 75..296 | 1110 | 100 | Plus |
2L | 23513712 | 2L | 110754..110879 | 374..499 | 630 | 100 | Plus |
2L | 23513712 | 2L | 111906..112020 | 497..611 | 575 | 100 | Plus |
2L | 23513712 | 2L | 110404..110483 | 295..374 | 400 | 100 | Plus |
2L | 23513712 | 2L | 108153..108226 | 1..74 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 113434..114211 | 1291..2068 | 3890 | 100 | Plus |
2L | 23513712 | 2L | 112687..113370 | 608..1291 | 3420 | 100 | Plus |
2L | 23513712 | 2L | 108588..108809 | 75..296 | 1110 | 100 | Plus |
2L | 23513712 | 2L | 110754..110879 | 374..499 | 630 | 100 | Plus |
2L | 23513712 | 2L | 111906..112020 | 497..611 | 575 | 100 | Plus |
2L | 23513712 | 2L | 110404..110483 | 295..374 | 400 | 100 | Plus |
2L | 23513712 | 2L | 108153..108226 | 1..74 | 370 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 108190..108263 | 1..74 | 100 | -> | Plus |
chr2L | 108625..108846 | 75..296 | 100 | -> | Plus |
chr2L | 110443..110520 | 297..374 | 100 | -> | Plus |
chr2L | 110792..110914 | 375..497 | 100 | -> | Plus |
chr2L | 111944..112056 | 498..610 | 100 | -> | Plus |
chr2L | 112727..113406 | 611..1290 | 100 | -> | Plus |
chr2L | 113471..114247 | 1291..2067 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
M(2)21AB-RF | 1..1227 | 173..1399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sam-S-RF | 1..1227 | 173..1399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sam-S-RI | 1..1227 | 173..1399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
M(2)21AB-RF | 1..1227 | 173..1399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sam-S-RI | 1..1227 | 173..1399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
M(2)21AB-RF | 65..2131 | 1..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sam-S-RF | 65..2131 | 1..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sam-S-RH | 217..2283 | 1..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
M(2)21AB-RF | 65..2131 | 1..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sam-S-RH | 217..2283 | 1..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 108588..108809 | 75..296 | 100 | -> | Plus |
2L | 110406..110483 | 297..374 | 100 | -> | Plus |
2L | 110755..110877 | 375..497 | 100 | -> | Plus |
2L | 111907..112019 | 498..610 | 100 | -> | Plus |
2L | 108153..108226 | 1..74 | 100 | -> | Plus |
2L | 112690..113369 | 611..1290 | 100 | -> | Plus |
2L | 113434..114210 | 1291..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 108588..108809 | 75..296 | 100 | -> | Plus |
2L | 110406..110483 | 297..374 | 100 | -> | Plus |
2L | 110755..110877 | 375..497 | 100 | -> | Plus |
2L | 111907..112019 | 498..610 | 100 | -> | Plus |
2L | 108153..108226 | 1..74 | 100 | -> | Plus |
2L | 112690..113369 | 611..1290 | 100 | -> | Plus |
2L | 113434..114210 | 1291..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 108588..108809 | 75..296 | 100 | -> | Plus |
2L | 110406..110483 | 297..374 | 100 | -> | Plus |
2L | 110755..110877 | 375..497 | 100 | -> | Plus |
2L | 111907..112019 | 498..610 | 100 | -> | Plus |
2L | 108153..108226 | 1..74 | 100 | -> | Plus |
2L | 112690..113369 | 611..1290 | 100 | -> | Plus |
2L | 113434..114210 | 1291..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 108153..108226 | 1..74 | 100 | -> | Plus |
arm_2L | 108588..108809 | 75..296 | 100 | -> | Plus |
arm_2L | 110406..110483 | 297..374 | 100 | -> | Plus |
arm_2L | 110755..110877 | 375..497 | 100 | -> | Plus |
arm_2L | 111907..112019 | 498..610 | 100 | -> | Plus |
arm_2L | 112690..113369 | 611..1290 | 100 | -> | Plus |
arm_2L | 113434..114210 | 1291..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 108153..108226 | 1..74 | 100 | -> | Plus |
2L | 108588..108809 | 75..296 | 100 | -> | Plus |
2L | 110406..110483 | 297..374 | 100 | -> | Plus |
2L | 110755..110877 | 375..497 | 100 | -> | Plus |
2L | 111907..112019 | 498..610 | 100 | -> | Plus |
2L | 112690..113369 | 611..1290 | 100 | -> | Plus |
2L | 113434..114210 | 1291..2067 | 100 | Plus |
Translation from 172 to 1398
> LD40460.pep MPQKTNGHSANGCNGSNGNSYDMEDGATFLFTSESVGEGHPDKMCDQISD AILDAHLKQDPNAKVACETVAKTGMILLCGEITSKAVVDYQKVVRETVQH IGYDDSSKGFDFKTCNVLLALDQQSPEIAAGVHVNRAEEEIGAGDQGIMF GYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYL FNQGSAVPKRVHTIVVSMQHSEKISLETLRSEVMEKVVKVVIPAKYIDAN TIVHINPCGLFVIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDFTK VDRSAAYAARWVAKSLVKAGLCKRCLVQVSYAIGLAEPLSITVFDYGTSH KSQKELLDIIRRNFDLRPGKIVKDLNLRQPIYQRTSTYGHFGRAGFSWEE AKPLEIDN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14863-PA | 445 | GF14863-PA | 1..445 | 1..407 | 2090 | 89.9 | Plus |
Dana\GF16137-PA | 147 | GF16137-PA | 1..147 | 226..407 | 669 | 76.4 | Plus |
Dana\GF16127-PA | 383 | GF16127-PA | 280..383 | 68..172 | 517 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24695-PA | 408 | GG24695-PA | 1..408 | 1..408 | 2006 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10060-PA | 448 | GH10060-PA | 1..448 | 1..407 | 1922 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sam-S-PE | 408 | CG2674-PE | 1..408 | 1..408 | 2144 | 100 | Plus |
Sam-S-PA | 408 | CG2674-PA | 1..408 | 1..408 | 2144 | 100 | Plus |
Sam-S-PI | 408 | CG2674-PI | 1..408 | 1..408 | 2144 | 100 | Plus |
Sam-S-PF | 408 | CG2674-PF | 1..408 | 1..408 | 2144 | 100 | Plus |
Sam-S-PH | 408 | CG2674-PH | 1..408 | 1..408 | 2144 | 100 | Plus |
Sam-S-PD | 408 | CG2674-PD | 1..408 | 1..408 | 2144 | 100 | Plus |
Sam-S-PJ | 408 | CG2674-PJ | 1..408 | 1..408 | 2096 | 97.1 | Plus |
Sam-S-PC | 408 | CG2674-PC | 1..408 | 1..408 | 2096 | 97.1 | Plus |
Sam-S-PG | 381 | CG2674-PG | 15..381 | 42..408 | 1868 | 96.7 | Plus |
Sam-S-PB | 200 | CG2674-PB | 1..146 | 1..146 | 721 | 91.8 | Plus |
Sam-S-PL | 138 | CG2674-PL | 1..116 | 1..116 | 586 | 94.8 | Plus |
Sam-S-PK | 115 | CG2674-PK | 1..109 | 1..109 | 579 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16450-PA | 421 | GI16450-PA | 1..421 | 1..407 | 1757 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16618-PA | 407 | GL16618-PA | 1..407 | 1..407 | 2147 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15421-PA | 407 | GA15421-PA | 1..407 | 1..407 | 1972 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16715-PA | 408 | GM16715-PA | 1..408 | 1..408 | 2016 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23001-PA | 381 | GD23001-PA | 15..381 | 42..408 | 1786 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16217-PA | 412 | GJ16217-PA | 1..412 | 1..407 | 1920 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24606-PA | 447 | GK24606-PA | 1..447 | 1..407 | 2061 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16582-PA | 464 | GE16582-PA | 1..464 | 1..408 | 2093 | 86.4 | Plus |
Translation from 172 to 1398
> LD40460.hyp MPQKTNGHSANGCNGSNGNSYDMEDGATFLFTSESVGEGHPDKMCDQISD AILDAHLKQDPNAKVACETVAKTGMILLCGEITSKAVVDYQKVVRETVQH IGYDDSSKGFDFKTCNVLLALDQQSPEIAAGVHVNRAEEEIGAGDQGIMF GYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYL FNQGSAVPKRVHTIVVSMQHSEKISLETLRSEVMEKVVKVVIPAKYIDAN TIVHINPCGLFVIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDFTK VDRSAAYAARWVAKSLVKAGLCKRCLVQVSYAIGLAEPLSITVFDYGTSH KSQKELLDIIRRNFDLRPGKIVKDLNLRQPIYQRTSTYGHFGRAGFSWEE AKPLEIDN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sam-S-PE | 408 | CG2674-PE | 1..408 | 1..408 | 2144 | 100 | Plus |
Sam-S-PA | 408 | CG2674-PA | 1..408 | 1..408 | 2144 | 100 | Plus |
Sam-S-PI | 408 | CG2674-PI | 1..408 | 1..408 | 2144 | 100 | Plus |
Sam-S-PF | 408 | CG2674-PF | 1..408 | 1..408 | 2144 | 100 | Plus |
Sam-S-PH | 408 | CG2674-PH | 1..408 | 1..408 | 2144 | 100 | Plus |