BDGP Sequence Production Resources |
Search the DGRC for LD40505
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 405 |
Well: | 5 |
Vector: | pOT2 |
Associated Gene/Transcript | U26-RA |
Protein status: | LD40505.pep: gold |
Sequenced Size: | 3317 |
Gene | Date | Evidence |
---|---|---|
U26-RA | 2010-11-11 | Gleaning Pick By Joe Carlson |
3317 bp assembled on 2011-02-17
GenBank Submission: BT126029.1
> LD40505.complete ATTTAGTTTTTTTACTGATTAAATGTTGTGTTCTTAAAAACAACACGGCG GCAGATTCGGCACCAGGACACAGTCATTCCCCTCCGCACTTGGTGCCTAT GATTCCATCAGATATGGACCTAATTGAATCAACCGCGGAGCAGCCGGACA AACTCTACAACATCAACAGAATCCGAGCGTTTAAAGATGTTCCCTTCCTG ATAAGGCGCACGGAGTCCAAGGACACGATCGTGTCATACGCCGATGCTGC AGATGAGATTCAAGTTTTGATGAATTTTCTGCGAAAGAACGGGGTCCCAG ATGAGGCAGGAATTGCTCTACGAGTCACGGAGCACACGCCGGCCTCTTCT CTTATGATTTTGGCGATCCTCAACAACAAGTGCCACTTTTTTCCCACGGA TAAGATGATGCTGTCACAGGATCTATACTCACAGATGAGCACGGCCGGAG TGGACTACCTCGTGGCCAACAAACATTTAACCGTTGCACCCTTGTACTTC ACATTTCTGGGGAGCATCTTGGTGTTTAAGGAGGACTGTAGGCTATACAG GGTAAAGTTGAAATCCGCTGATGAGACTGTACAATCCAAAAAGCCGTTAC CAGCCAATATGTGCTACACAATCTCCACGACGGGCACTACGGGTAAGCCA AAGCTCATACATGTGCCCTATGAATGCATAGCGCCCAACATAGTGGGGCT CAGCCAAAAGTTAAACGTCTCCATGGCCGACATCATTTACCTTGGCACAC CAATTACCTTCGATCCCTTCGTGGTGGAGTTCTTCCTAGCTCTTCAAAAT GGTGCTACTTTACTGACCAGTCGTCACTCCATGAGGGACTCGCCAAGCAA GGTGCTAAGTGCCCTCTTCCCCGACAACCTGGCCACACCGGGAATCACTG TTCTGCAGATGACTCCTTCGCTGTTTCGGCAATTTGGTGCATCTTCCATC AAAGATCGAGTGCTCAGCGGGTCCAGTTCATTGAGAGTACTGCTCCTTGG TGGCGAACCATTTCCCAGCAATGTCGAGCTTGTTACTTGGATGCATCCAA GTGTCCTGATGCAGAAGCACATATGCAACATATATGGAATCACGGAAATA TCCTGTTGGAGCCTACTGCACATCGTTCAGTCATTACAATCTCCTGTGCC TTTGGGCACGCCTATCGAAGAGGACACGGTTCTGCGGATTGAATCCGAAG ACAATGAAACCTCACAGCAAGGAGAGCTGTTTCTGGGTAGTGTCAAGCGG CGTTGCTATATCCCAGAAGTTGATGACCAGGCGAATGCTTCACAAGACGA TTCAGGTATTTGTTTCAGGGCGACAGGAGATTTGGTAACACGACAGCAGG ATGGCACATTGTTCTATAGTGAGAGATCGAACGATGTGGTAAAGCGAGCT GGTAATCGCATTAGCTTGGGTTTAATCACCAGAAAAATTCAAAAATGTCT GCCTAGCTCGGAACTGACTACTTGCCTATGGCTCGAAGATTTGCAGAAAC TCATTTGCTGCATTCGAACCCTAGAGTCGAAGACTAGAGTTCAGCAGCGG GTCCAAACCTTTGATATACTTTCCAAGGTATCGATTGCCGAGCAGCCAGA TAGATTTGTCTATCTGCAACACTTTCCCTGCAACGTACACGGCAAGCTAG ACAAGCAACAGCTTCTTAAAATGTGCATTCCCCTTGCACAACCAGCTCAG CAGATATTAAAGAGCTATCTACACGATAGGCTAGAATGTGTGGAAGAGCC TGATGATAGCGCTTCGAAAAAGCAGCGACTTGATGACGCCGCTCCCTGTG GCTATGATTTGAGTTTTCGCCAGGCGGGTGGCACATCATTCCATGCCATC ACCATTTGCCGAGAGATAGGTTTACAAATGTGCATCGATGATGAGCAACG CCACTTGTTCGAAATGCTACTGGATGAGAACATTCCGTTGCGCACAGTGC TAAGATTCTTGGACACAGCCAAGTTGGTGGCCAACAATATTAAGCGAAAG AATGTTGAGACAGCGGTAGTTGTCTCAGCCTGCCAAAGTGGCTTGATTAT TAAACGTATCGAACAGCCGGTCCTCAAGCTTCAGATCTACTGGAAGGTCA ACTTCGAGAAGTGCATAGACTCCCCAGTGACCGAATACGAGGGACGCTTC ATTTGCGTGGGCGCACATTCGAAAATCCTCCGGACGCTTAATCCCCAGAC GGGCAGCGAATACAGTGTAGTGAAACTTCCCGAACGTATCGAGTGTAAGG TGACGTTCCTCACCGAGCAGCTTGCCATGGTGGGCTGCTACGATGGATGT CTCTACGGTTTCAATCCCCAAACCGGTAACATTGTATTTCGCGTTGGAAT TGGTGGCTTAATTAAGTCGCAGCCCATGCTAACCGCCGATGGTCGCCGAA TCATAGTATGCAGCTATGCCGATGACTACAATGTCTATTGCTTGTCAGCC GAGCGGCAGGAGGTGCTGTGGTGCCTAAGGATCGGTGAAAAACCGATCTT TGCGAGTCCTTTGGAGCTGCCGAGGGAACAGTCGCTGATAGTCTGCACTT TGGACGGCAGCTACTCACGTGTGGCCATTACCGATGGCTCAGTGGAGTGG ACGCAGAAATTTAGAGAACCAGTATTCTCCACACCTGTTCTTTTGGAATC CGTATCCAATATTTTTCTAAGCGCGGAAGTGGCTGGGCGAGTCCATGCCT GTCATGTGGGCAATGGCAAAATTCTGGCTACCTTCAGCACAGAAGGAAAC ATTTTCTCTTCGCTAGTGGTCAAGACCCCACCGACTTTTATGGGACATTC CTTTGCCATTTTTGGTTGCATAGACCAACATTTGTATTGCCTGCGATGCA AAACCGGACCGGGTGGCAAATCTGTTGAGCTTGAGCTGCACTGGAAGGTC GATGTGGGTGCACCCATATATGCCACGCCAACTTTGCTAACAGTGCAGCC GAACGGTCTTTTGGTTTGGTGCGCCGCCACCGATGGACGCGTCATGCTGA TAAACTTTAGAAATGGCGAGATTCAGTGGTCGGATAAACTACCCGGTCAA GTCTTTTCCAGTGCATGCTTTATTGAGGACCTGCGTCGTGTTTTCGTGGG ATGCCGAGACAATTTCCTTTACTGTCTGGGCATCTAGATATCAACTGCAA CTGATACATTTCCATTTACAATCAACTTGTTGCTTAGCAGTAAGATAGAA AAGTGTGCCTGATTAAATACATTAATTTACAGAGGAATACAGAATTTACT TGTATAACTACAATTTAAGCACAATGTCCAGTTGTTAAAGTACATACATA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 8445460..8446764 | 2723..1419 | 6435 | 99.5 | Minus |
chr2L | 23010047 | chr2L | 8444825..8445400 | 3299..2724 | 2820 | 99.3 | Minus |
chr2L | 23010047 | chr2L | 8446813..8447250 | 1421..984 | 2190 | 100 | Minus |
chr2L | 23010047 | chr2L | 8448059..8448426 | 365..1 | 1685 | 97.8 | Minus |
chr2L | 23010047 | chr2L | 8447660..8447998 | 703..365 | 1530 | 96.8 | Minus |
chr2L | 23010047 | chr2L | 8447320..8447603 | 985..702 | 1420 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8446565..8447869 | 2723..1419 | 6525 | 100 | Minus |
2L | 23513712 | 2L | 8445923..8446505 | 3306..2724 | 2900 | 99.8 | Minus |
2L | 23513712 | 2L | 8447918..8448355 | 1421..984 | 2190 | 100 | Minus |
2L | 23513712 | 2L | 8449158..8449522 | 365..1 | 1825 | 100 | Minus |
2L | 23513712 | 2L | 8448759..8449097 | 703..365 | 1695 | 100 | Minus |
2L | 23513712 | 2L | 8448425..8448708 | 985..702 | 1420 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8446565..8447869 | 2723..1419 | 6525 | 100 | Minus |
2L | 23513712 | 2L | 8445923..8446505 | 3306..2724 | 2900 | 99.8 | Minus |
2L | 23513712 | 2L | 8447918..8448355 | 1421..984 | 2190 | 100 | Minus |
2L | 23513712 | 2L | 8449158..8449522 | 365..1 | 1825 | 100 | Minus |
2L | 23513712 | 2L | 8448759..8449097 | 703..365 | 1695 | 100 | Minus |
2L | 23513712 | 2L | 8448425..8448708 | 985..702 | 1420 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8444825..8445400 | 2724..3299 | 99 | <- | Minus |
chr2L | 8445460..8446763 | 1420..2723 | 99 | <- | Minus |
chr2L | 8446815..8447248 | 986..1419 | 100 | <- | Minus |
chr2L | 8447320..8447601 | 704..985 | 100 | <- | Minus |
chr2L | 8447660..8447998 | 365..703 | 96 | <- | Minus |
chr2L | 8448060..8448426 | 1..364 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U26-RA | 1..3039 | 99..3137 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U26-RA | 1..3039 | 99..3137 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U26-RA | 1..3039 | 99..3137 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U26-RA | 50..3348 | 1..3299 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U26-RA | 55..3353 | 1..3299 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U26-RA | 55..3353 | 1..3299 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8445930..8446505 | 2724..3299 | 100 | <- | Minus |
2L | 8446565..8447868 | 1420..2723 | 100 | <- | Minus |
2L | 8447920..8448353 | 986..1419 | 100 | <- | Minus |
2L | 8448425..8448706 | 704..985 | 100 | <- | Minus |
2L | 8448759..8449097 | 365..703 | 100 | <- | Minus |
2L | 8449159..8449522 | 1..364 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8445930..8446505 | 2724..3299 | 100 | <- | Minus |
2L | 8446565..8447868 | 1420..2723 | 100 | <- | Minus |
2L | 8447920..8448353 | 986..1419 | 100 | <- | Minus |
2L | 8448425..8448706 | 704..985 | 100 | <- | Minus |
2L | 8448759..8449097 | 365..703 | 100 | <- | Minus |
2L | 8449159..8449522 | 1..364 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8445930..8446505 | 2724..3299 | 100 | <- | Minus |
2L | 8446565..8447868 | 1420..2723 | 100 | <- | Minus |
2L | 8447920..8448353 | 986..1419 | 100 | <- | Minus |
2L | 8448425..8448706 | 704..985 | 100 | <- | Minus |
2L | 8448759..8449097 | 365..703 | 100 | <- | Minus |
2L | 8449159..8449522 | 1..364 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8445930..8446505 | 2724..3299 | 100 | <- | Minus |
arm_2L | 8446565..8447868 | 1420..2723 | 100 | <- | Minus |
arm_2L | 8447920..8448353 | 986..1419 | 100 | <- | Minus |
arm_2L | 8448425..8448706 | 704..985 | 100 | <- | Minus |
arm_2L | 8448759..8449097 | 365..703 | 100 | <- | Minus |
arm_2L | 8449159..8449522 | 1..364 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8445930..8446505 | 2724..3299 | 100 | <- | Minus |
2L | 8446565..8447868 | 1420..2723 | 100 | <- | Minus |
2L | 8447920..8448353 | 986..1419 | 100 | <- | Minus |
2L | 8448425..8448706 | 704..985 | 100 | <- | Minus |
2L | 8448759..8449097 | 365..703 | 100 | <- | Minus |
2L | 8449159..8449522 | 1..364 | 100 | Minus |
Translation from 2 to 3136
> LD40505.pep LVFLLIKCCVLKNNTAADSAPGHSHSPPHLVPMIPSDMDLIESTAEQPDK LYNINRIRAFKDVPFLIRRTESKDTIVSYADAADEIQVLMNFLRKNGVPD EAGIALRVTEHTPASSLMILAILNNKCHFFPTDKMMLSQDLYSQMSTAGV DYLVANKHLTVAPLYFTFLGSILVFKEDCRLYRVKLKSADETVQSKKPLP ANMCYTISTTGTTGKPKLIHVPYECIAPNIVGLSQKLNVSMADIIYLGTP ITFDPFVVEFFLALQNGATLLTSRHSMRDSPSKVLSALFPDNLATPGITV LQMTPSLFRQFGASSIKDRVLSGSSSLRVLLLGGEPFPSNVELVTWMHPS VLMQKHICNIYGITEISCWSLLHIVQSLQSPVPLGTPIEEDTVLRIESED NETSQQGELFLGSVKRRCYIPEVDDQANASQDDSGICFRATGDLVTRQQD GTLFYSERSNDVVKRAGNRISLGLITRKIQKCLPSSELTTCLWLEDLQKL ICCIRTLESKTRVQQRVQTFDILSKVSIAEQPDRFVYLQHFPCNVHGKLD KQQLLKMCIPLAQPAQQILKSYLHDRLECVEEPDDSASKKQRLDDAAPCG YDLSFRQAGGTSFHAITICREIGLQMCIDDEQRHLFEMLLDENIPLRTVL RFLDTAKLVANNIKRKNVETAVVVSACQSGLIIKRIEQPVLKLQIYWKVN FEKCIDSPVTEYEGRFICVGAHSKILRTLNPQTGSEYSVVKLPERIECKV TFLTEQLAMVGCYDGCLYGFNPQTGNIVFRVGIGGLIKSQPMLTADGRRI IVCSYADDYNVYCLSAERQEVLWCLRIGEKPIFASPLELPREQSLIVCTL DGSYSRVAITDGSVEWTQKFREPVFSTPVLLESVSNIFLSAEVAGRVHAC HVGNGKILATFSTEGNIFSSLVVKTPPTFMGHSFAIFGCIDQHLYCLRCK TGPGGKSVELELHWKVDVGAPIYATPTLLTVQPNGLLVWCAATDGRVMLI NFRNGEIQWSDKLPGQVFSSACFIEDLRRVFVGCRDNFLYCLGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14373-PA | 1038 | GF14373-PA | 38..1038 | 48..1044 | 4024 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24071-PA | 1036 | GG24071-PA | 11..1036 | 16..1044 | 5012 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10773-PA | 1064 | GH10773-PA | 19..1064 | 17..1044 | 3362 | 59.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Aasdh-PC | 1012 | CG13401-PC | 1..1012 | 33..1044 | 5274 | 100 | Plus |
Aasdh-PA | 1012 | CG13401-PA | 1..1012 | 33..1044 | 5274 | 100 | Plus |
Aasdh-PD | 323 | CG13401-PD | 1..299 | 33..331 | 1506 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17636-PA | 1065 | GI17636-PA | 42..1065 | 36..1044 | 3475 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26185-PA | 1050 | GL26185-PA | 37..1050 | 37..1044 | 3909 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28064-PA | 1050 | GA28064-PA | 37..1050 | 37..1044 | 3913 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12913-PA | 1007 | GM12913-PA | 1..1007 | 33..1044 | 5199 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22399-PA | 1025 | GD22399-PA | 2..1025 | 19..1044 | 5208 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18201-PA | 1039 | GJ18201-PA | 22..1039 | 17..1044 | 3455 | 62.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18378-PA | 1104 | GK18378-PA | 93..1104 | 50..1044 | 3464 | 63 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10977-PA | 1033 | GE10977-PA | 11..1033 | 16..1044 | 4980 | 89.7 | Plus |
Translation from 2 to 3136
> LD40505.hyp LVFLLIKCCVLKNNTAADSAPGHSHSPPHLVPMIPSDMDLIESTAEQPDK LYNINRIRAFKDVPFLIRRTESKDTIVSYADAADEIQVLMNFLRKNGVPD EAGIALRVTEHTPASSLMILAILNNKCHFFPTDKMMLSQDLYSQMSTAGV DYLVANKHLTVAPLYFTFLGSILVFKEDCRLYRVKLKSADETVQSKKPLP ANMCYTISTTGTTGKPKLIHVPYECIAPNIVGLSQKLNVSMADIIYLGTP ITFDPFVVEFFLALQNGATLLTSRHSMRDSPSKVLSALFPDNLATPGITV LQMTPSLFRQFGASSIKDRVLSGSSSLRVLLLGGEPFPSNVELVTWMHPS VLMQKHICNIYGITEISCWSLLHIVQSLQSPVPLGTPIEEDTVLRIESED NETSQQGELFLGSVKRRCYIPEVDDQANASQDDSGICFRATGDLVTRQQD GTLFYSERSNDVVKRAGNRISLGLITRKIQKCLPSSELTTCLWLEDLQKL ICCIRTLESKTRVQQRVQTFDILSKVSIAEQPDRFVYLQHFPCNVHGKLD KQQLLKMCIPLAQPAQQILKSYLHDRLECVEEPDDSASKKQRLDDAAPCG YDLSFRQAGGTSFHAITICREIGLQMCIDDEQRHLFEMLLDENIPLRTVL RFLDTAKLVANNIKRKNVETAVVVSACQSGLIIKRIEQPVLKLQIYWKVN FEKCIDSPVTEYEGRFICVGAHSKILRTLNPQTGSEYSVVKLPERIECKV TFLTEQLAMVGCYDGCLYGFNPQTGNIVFRVGIGGLIKSQPMLTADGRRI IVCSYADDYNVYCLSAERQEVLWCLRIGEKPIFASPLELPREQSLIVCTL DGSYSRVAITDGSVEWTQKFREPVFSTPVLLESVSNIFLSAEVAGRVHAC HVGNGKILATFSTEGNIFSSLVVKTPPTFMGHSFAIFGCIDQHLYCLRCK TGPGGKSVELELHWKVDVGAPIYATPTLLTVQPNGLLVWCAATDGRVMLI NFRNGEIQWSDKLPGQVFSSACFIEDLRRVFVGCRDNFLYCLGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
U26-PC | 1012 | CG13401-PC | 1..1012 | 33..1044 | 5274 | 100 | Plus |
U26-PA | 1012 | CG13401-PA | 1..1012 | 33..1044 | 5274 | 100 | Plus |
U26-PD | 323 | CG13401-PD | 1..299 | 33..331 | 1506 | 99.3 | Plus |