BDGP Sequence Production Resources |
Search the DGRC for LD40589
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 405 |
Well: | 89 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9839-RA |
Protein status: | LD40589.pep: gold |
Preliminary Size: | 2055 |
Sequenced Size: | 2114 |
Gene | Date | Evidence |
---|---|---|
CG9839 | 2001-01-01 | Release 2 assignment |
CG9839 | 2001-11-29 | Blastp of sequenced clone |
CG9839 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9839 | 2008-04-29 | Release 5.5 accounting |
CG9839 | 2008-08-15 | Release 5.9 accounting |
CG9839 | 2008-12-18 | 5.12 accounting |
2114 bp (2114 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069639
> LD40589.complete CACAACATACAGCACATGTGACTCGAGTGAGAGAGGACGAGTGACAGTGA GGTCGAAGAAAAACACGCGTTGCTGCGGCTAAAATTTCCTCTGTATTTAC ATTATTTGGAAGAGAAAACGCAGCCAAACGAAATGTCCAGCTCCGGAAGA AAGCGCAAGCAGCAACTTAAGCCGCGTCAGGACGATCACCGGTCGCCGGT GAAGCGACGCAGTGTGGACATCAAGTCGGAACCCTTGGACGGCTATCCGG CGCTAGCAGACTACGATTTAAGTACGGCCGATATCAAGCCGGATCTCACT GAACTCCAATTGCAGCTGGTGGCGGAGCAGCAGGCGGCCAGCAACACCAT TCGCTTGGAATTGGAACAGCAAGAGAGTGATTCCGACGAGGATGGCTACT CAGAGCTCGATTACCAAGCTGAAGATGTCTTCTGTCAGGACGATATGGAT GACTACGATCCAGATTGGTCCAGCCAGCAGACGGGTTCCCGACTGCTCTT CAAATTTCCCATCCAGCAGAGTGGCCTGAAATTCGGACAACGCTTCCAGG GACCACAGCACTACTTCAACCAAGTGCTGGGAAATCGCTCCAAGTTCTTC AGTTCCCTGGCCCAAAGCTGCAACCTAAAGGGAGGAGAGCTCAAGTCCAA TCCCACAACTGCCGAAGAAATGGAAATCTTTATGGCGCTTTCCCTGCTTA TGTGTGACCTGAAGCTGGAGCACCTATCGGATTACTGGAGCACTAACATG TTTTACGGTCTCGTCGGATTCTCTGGGAAGATTCCTCTGGAACGGTATCA GCAGCTGCTGCACTGCCTTAACTTTGATGCACCGCAGCTACAAGCGGGCA GAGCCAAAGTGAAGAACTCTCTACTGCTAGACTTTATCAACGAGCGTATG GAAGAGATATACATTTGTGGCCAGCAACTGGTGCTCAATGAACCTATCAC TCTGTGGAAGGGTGCATTAAGATACCAGGATGAACTTCCAAACAAATTCC GCACCAACGCACTACTGCTGCATATGCTAACTGAGCAGAGCGGTTTGGTG GTGAAGATTCTACCGGAGATTGTGCGGAAGGAAGACGCACCGGCATGGGT ACGCAATTCCCGGCAGTTGGTGGAGCACCGAAACAAGATTGTCCTGAAAC TAATGGAGGGTTACCATGGAGGACGCACTGTGTACACCTCAAAGTTCTAT GGAAGCTACGGCCTGGCTCAGGAGTTGGCCAAGAAAAGCACCTATTGCAC TGGTCTGCTGGACAGGAATAGATATGGCAACAGTAAGGCACTGGTGCACC AGCGGTTGGATTCCAACAGCATCTCCACCAGCTATGCCACTTCTCTGATG ATGGCCAAATGGCGACGACGGGCAAAGAGCTTGTACTGCTTCAGCTCTGA CTGCTTGGCCATTTATTCCAAGGAGATGGCCATGCAAAAGACAAATGCAA AACCTAAGTTGATCCAGGAGCTCGAGTTTCAACTACGACCTGGAAACGAC GGTCGCCACCACCTGATCCACTACCAAGCTGCCTGCAAGGAGCTGAAGGC AAACATAAAGTTGACCATTTTCCTACTCAACATCCTCGTGTACAATGCCT ATTTGCTATACTTTGCTAATGGCCAGAATGCGCGAGTCGGACATCTTAAA AGTTACTCGGAGTTCCGGGTGATCATCATAAAGTCGCTTCTAAGAGAAGA AGTGACGAACGAACCGGTAACTAGTATCCAGAAGCCAGAGACATATGAAC GGTCAAAGAACAAGCCGGTGCCCGAGCCCAGGTTGAAGACCATTCTACAC GAACCCATGCTTATCCAGCAGAACGGGAAGCCGGCCAAGAAAAACTGCCG CTATTGCCACAAAGGCGGAATGCTGCAGTTCAGCAGGTACATGTGCAACA CCTGTCCCGATAAGCCGGGTCTATGCCAGGAACCCTGCTTCCTTCTCTGG CATGAGCAGCTCAAAAAAGTAATCAGACAGACAATTGGACGAAGTGAATA AAAATGGATTATCATTCGTTAAGAGGAACAAATGTTTTTTGTTTAAAGTT TCACACACAAGTTCTTTAAAATAAAAACTTATCCTTCCCCCTTTCAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9839-RA | 2205 | CG9839-RA | 98..2195 | 1..2098 | 10490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TART-A | 13424 | TART-A 13424bp | 535..658 | 2095..1977 | 131 | 63.3 | Minus |
TART-A | 13424 | TART-A 13424bp | 11713..11836 | 2095..1977 | 131 | 63.3 | Minus |
Tc1-2 | 1644 | Tc1-2 TC1-2 1644bp | 295..350 | 2036..1981 | 118 | 67.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4629420..4631075 | 440..2095 | 99 | <- | Minus |
chr3R | 4631141..4631579 | 1..439 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9839-RA | 1..1869 | 133..2001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9839-RA | 1..1869 | 133..2001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9839-RA | 1..1869 | 133..2001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9839-RA | 1..1869 | 133..2001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9839-RA | 1..1869 | 133..2001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9839-RA | 1..2095 | 1..2095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9839-RA | 1..2095 | 1..2095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9839-RB | 92..2186 | 1..2095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9839-RA | 1..2095 | 1..2095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9839-RB | 92..2186 | 1..2095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8803471..8805126 | 440..2095 | 100 | <- | Minus |
3R | 8805192..8805630 | 1..439 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8803471..8805126 | 440..2095 | 100 | <- | Minus |
3R | 8805192..8805630 | 1..439 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8803471..8805126 | 440..2095 | 100 | <- | Minus |
3R | 8805192..8805630 | 1..439 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4629193..4630848 | 440..2095 | 100 | <- | Minus |
arm_3R | 4630914..4631352 | 1..439 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8544302..8545957 | 440..2095 | 100 | <- | Minus |
3R | 8546023..8546461 | 1..439 | 100 | Minus |
Translation from 132 to 2000
> LD40589.pep MSSSGRKRKQQLKPRQDDHRSPVKRRSVDIKSEPLDGYPALADYDLSTAD IKPDLTELQLQLVAEQQAASNTIRLELEQQESDSDEDGYSELDYQAEDVF CQDDMDDYDPDWSSQQTGSRLLFKFPIQQSGLKFGQRFQGPQHYFNQVLG NRSKFFSSLAQSCNLKGGELKSNPTTAEEMEIFMALSLLMCDLKLEHLSD YWSTNMFYGLVGFSGKIPLERYQQLLHCLNFDAPQLQAGRAKVKNSLLLD FINERMEEIYICGQQLVLNEPITLWKGALRYQDELPNKFRTNALLLHMLT EQSGLVVKILPEIVRKEDAPAWVRNSRQLVEHRNKIVLKLMEGYHGGRTV YTSKFYGSYGLAQELAKKSTYCTGLLDRNRYGNSKALVHQRLDSNSISTS YATSLMMAKWRRRAKSLYCFSSDCLAIYSKEMAMQKTNAKPKLIQELEFQ LRPGNDGRHHLIHYQAACKELKANIKLTIFLLNILVYNAYLLYFANGQNA RVGHLKSYSEFRVIIIKSLLREEVTNEPVTSIQKPETYERSKNKPVPEPR LKTILHEPMLIQQNGKPAKKNCRYCHKGGMLQFSRYMCNTCPDKPGLCQE PCFLLWHEQLKKVIRQTIGRSE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16829-PA | 612 | GF16829-PA | 1..612 | 1..612 | 2205 | 67.6 | Plus |
Dana\GF13642-PA | 274 | GF13642-PA | 7..274 | 347..612 | 1001 | 70.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17417-PA | 613 | GG17417-PA | 1..613 | 1..612 | 2999 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19333-PA | 660 | GH19333-PA | 1..655 | 1..609 | 1632 | 52.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9839-PB | 622 | CG9839-PB | 1..622 | 1..622 | 3266 | 100 | Plus |
CG9839-PA | 622 | CG9839-PA | 1..622 | 1..622 | 3266 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23943-PA | 659 | GI23943-PA | 1..653 | 1..612 | 1651 | 53.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12122-PA | 625 | GL12122-PA | 1..625 | 1..612 | 2113 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22067-PA | 625 | GA22067-PA | 1..625 | 1..612 | 2113 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26303-PA | 612 | GM26303-PA | 1..612 | 1..612 | 3097 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20838-PA | 388 | GD20838-PA | 1..388 | 1..388 | 1901 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23732-PA | 647 | GJ23732-PA | 1..640 | 1..612 | 1759 | 54.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11821-PA | 622 | GK11821-PA | 1..618 | 1..609 | 1768 | 57.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24817-PA | 613 | GE24817-PA | 1..613 | 1..612 | 3064 | 91.8 | Plus |
Translation from 132 to 2000
> LD40589.hyp MSSSGRKRKQQLKPRQDDHRSPVKRRSVDIKSEPLDGYPALADYDLSTAD IKPDLTELQLQLVAEQQAASNTIRLELEQQESDSDEDGYSELDYQAEDVF CQDDMDDYDPDWSSQQTGSRLLFKFPIQQSGLKFGQRFQGPQHYFNQVLG NRSKFFSSLAQSCNLKGGELKSNPTTAEEMEIFMALSLLMCDLKLEHLSD YWSTNMFYGLVGFSGKIPLERYQQLLHCLNFDAPQLQAGRAKVKNSLLLD FINERMEEIYICGQQLVLNEPITLWKGALRYQDELPNKFRTNALLLHMLT EQSGLVVKILPEIVRKEDAPAWVRNSRQLVEHRNKIVLKLMEGYHGGRTV YTSKFYGSYGLAQELAKKSTYCTGLLDRNRYGNSKALVHQRLDSNSISTS YATSLMMAKWRRRAKSLYCFSSDCLAIYSKEMAMQKTNAKPKLIQELEFQ LRPGNDGRHHLIHYQAACKELKANIKLTIFLLNILVYNAYLLYFANGQNA RVGHLKSYSEFRVIIIKSLLREEVTNEPVTSIQKPETYERSKNKPVPEPR LKTILHEPMLIQQNGKPAKKNCRYCHKGGMLQFSRYMCNTCPDKPGLCQE PCFLLWHEQLKKVIRQTIGRSE*