BDGP Sequence Production Resources |
Search the DGRC for LD40680
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 406 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | CG30467-RA |
Protein status: | LD40680.pep: gold |
Preliminary Size: | 4273 |
Sequenced Size: | 1765 |
Gene | Date | Evidence |
---|---|---|
CG8185 | 2001-01-01 | Release 2 assignment |
CG30467 | 2001-07-04 | Blastp of sequenced clone |
CG30467 | 2003-01-01 | Sim4 clustering to Release 3 |
CG30467 | 2008-04-29 | Release 5.5 accounting |
CG30467 | 2008-08-15 | Release 5.9 accounting |
CG30467 | 2008-12-18 | 5.12 accounting |
1765 bp (1765 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051921
> LD40680.complete AAAAGATCTTGTCCAAAATATATTGATTAGTACCACTGCCATTCTGCATT CTGCCAAACGAACCCGTTAAACAGTTTGCCCAGACCCGGATCCAGATCGA AATGCCCAAGGAAGAAGCGGAGCCATCGGCGAGTGGTCTTGCGGTGGCCG CCAAGCAAAACGATGTGCCATCCGCGGAAAACTCGAATCACAAGGAAAGC GACGCATACGCCTCCGCCTCTGCCAGCGCCAGTAGCGCCTCGACCACGCC CCCACCCGCCCAGGAAGACGCCGAGGAGGCGGAGCTGCTGGAGCGTATGC GCGGCGATGCAGTCGGCAACACCATGTACAGCAGTCGATTCATCCTGAAA ACGGTGATGAGGGTGGGAGAATTACTGCGGCATTCAACACTGGATCAGCA GCTGGAGGATGACCTGTGCAAAGTGTGGGACATGTCGGTGTCCCCCGAAG TGGTCACACTGCTGCTGGAGAACGGAGCCATTGATCCGATCATGTACACC CTGGTGGCGGGCTGTGAAGATGTGCGGCTCTACGAGATTCTTATCGGACT GCTGGGCAATATGTGCGCCCAGGTGGAGTGCGCAGAGATATTGGCCTGTG ACCGCTACACGTTGGAAACCCTGTTCAAGATGACATACTGCATGGACACC GCCATGTTGATACAGCTGATGCGACTCTTTCAGTACATCATGGCCCATGT GCTTAGCGGCAAGGAGAAGTTCGCTGTGAACTGGTACATCTGCTTTGCTG CCTTTGAGAACTCCGCGCAGAACCTGGGCAGGATATTGCAACTGTCCGTT AGCGATGAACTGCTAGTAGCTGCACTGAAGGCCACAAATGCTGTGCTGGC CAGTTGCGCCTTGGTGGAGGAGGAAAACGCAAACTCCACGTTGAATCTAA AGCCTTTTGCGGAGGTCTTTCTAGTGCCAGAACTCTGCGAGGGGGTCAAT AGCGCGTTTTTGCGACTCATGCGCGATGATCAGACAAAATTGACCGACGA GGAAGCTGGCGAGGACAACGAAGATGCAGAAGTGCCAGCGGCCCACGACA GTGATGAAGATGCCGACGTCGGTTACGACTCGTGCGGACCAAAAATAACC TGTGATGTGGAGATCATACAAACCTACCTCAATATATGCACCATTCTGGT CCAACTGCCAGAGGCGCAGGCCTCCATGGATGTGTATGCACCCAGTATAG TCAGTTGTCTAGCGCGAATACTGCAGTTTTTGCAGCAGCCTCTGCAACTC ATTCCATTAGGCGAACGCCAGGAGGAGTATCTCGAGGATCTGGCGCACAT TTGGAGTCGCCTGAAGTACTTCTATCACAAGGAGGCCTTCTTAAATCTTT TGGAATTGTGGTATAGACTTAAACAGCACATTGACAACTACACGGGGGGA AGTGATCCCGACGCCAATGAGTTCGAAGAGGACGAAGAGGAGGAGGATGA CGCTCCAAAGGAGCAGTATGTGGAGAACGCCTTGAAGTTGCTGCGCCTGT TGGCATGTATGGTGATAAAAGCGGAAAACTCGGATCTCCAAGAGATTGGC GATGAAAAGGTGCAACTGTTTGTGTCTGCACTCAAAGCCGGAAAGGAAGA AGCCATTTTCTCAAGGGCACTTGAATGCTTAAAGGATAAAGTGGCTAAGG AGTCGGGCCAAGCCTAAACAACATGCCTCCATGATGGATAAAGCAAAAAT GACTGAGATTGTAGCTTGCAGCACAATATATTCTTAACTTAGTTAAAAAA AAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11425363..11426669 | 1..1307 | 100 | -> | Plus |
chr2R | 11426728..11427164 | 1308..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30467-RA | 1..1566 | 102..1667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30467-RA | 1..1566 | 102..1667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30467-RA | 1..1566 | 102..1667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30467-RA | 1..1566 | 102..1667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30467-RA | 1..1566 | 102..1667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30467-RA | 1..1744 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30467-RA | 1..1744 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30467-RA | 39..1782 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30467-RA | 1..1744 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30467-RA | 39..1782 | 1..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15538213..15539519 | 1..1307 | 100 | -> | Plus |
2R | 15539578..15540014 | 1308..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15538213..15539519 | 1..1307 | 100 | -> | Plus |
2R | 15539578..15540014 | 1308..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15538213..15539519 | 1..1307 | 100 | -> | Plus |
2R | 15539578..15540014 | 1308..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11425718..11427024 | 1..1307 | 100 | -> | Plus |
arm_2R | 11427083..11427519 | 1308..1744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15539412..15540718 | 1..1307 | 100 | -> | Plus |
2R | 15540777..15541213 | 1308..1744 | 100 | Plus |
Translation from 101 to 1666
> LD40680.pep MPKEEAEPSASGLAVAAKQNDVPSAENSNHKESDAYASASASASSASTTP PPAQEDAEEAELLERMRGDAVGNTMYSSRFILKTVMRVGELLRHSTLDQQ LEDDLCKVWDMSVSPEVVTLLLENGAIDPIMYTLVAGCEDVRLYEILIGL LGNMCAQVECAEILACDRYTLETLFKMTYCMDTAMLIQLMRLFQYIMAHV LSGKEKFAVNWYICFAAFENSAQNLGRILQLSVSDELLVAALKATNAVLA SCALVEEENANSTLNLKPFAEVFLVPELCEGVNSAFLRLMRDDQTKLTDE EAGEDNEDAEVPAAHDSDEDADVGYDSCGPKITCDVEIIQTYLNICTILV QLPEAQASMDVYAPSIVSCLARILQFLQQPLQLIPLGERQEEYLEDLAHI WSRLKYFYHKEAFLNLLELWYRLKQHIDNYTGGSDPDANEFEEDEEEEDD APKEQYVENALKLLRLLACMVIKAENSDLQEIGDEKVQLFVSALKAGKEE AIFSRALECLKDKVAKESGQA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11141-PA | 525 | GF11141-PA | 1..523 | 1..521 | 1645 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20532-PA | 520 | GG20532-PA | 1..520 | 1..521 | 2283 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19968-PA | 532 | GH19968-PA | 1..531 | 1..521 | 1390 | 55.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30467-PA | 521 | CG30467-PA | 1..521 | 1..521 | 2658 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20254-PA | 532 | GI20254-PA | 31..531 | 9..521 | 1426 | 58.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20076-PA | 531 | GL20076-PA | 1..531 | 1..521 | 1577 | 64.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15862-PA | 528 | GA15862-PA | 1..528 | 1..521 | 1557 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21622-PA | 521 | GM21622-PA | 1..521 | 1..521 | 2676 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11124-PA | 509 | GD11124-PA | 1..509 | 1..521 | 2601 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20207-PA | 530 | GJ20207-PA | 15..529 | 14..521 | 1404 | 57 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23027-PA | 507 | GK23027-PA | 1..507 | 22..521 | 1540 | 61.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11716-PA | 524 | GE11716-PA | 1..524 | 1..521 | 2309 | 90.1 | Plus |
Translation from 101 to 1666
> LD40680.hyp MPKEEAEPSASGLAVAAKQNDVPSAENSNHKESDAYASASASASSASTTP PPAQEDAEEAELLERMRGDAVGNTMYSSRFILKTVMRVGELLRHSTLDQQ LEDDLCKVWDMSVSPEVVTLLLENGAIDPIMYTLVAGCEDVRLYEILIGL LGNMCAQVECAEILACDRYTLETLFKMTYCMDTAMLIQLMRLFQYIMAHV LSGKEKFAVNWYICFAAFENSAQNLGRILQLSVSDELLVAALKATNAVLA SCALVEEENANSTLNLKPFAEVFLVPELCEGVNSAFLRLMRDDQTKLTDE EAGEDNEDAEVPAAHDSDEDADVGYDSCGPKITCDVEIIQTYLNICTILV QLPEAQASMDVYAPSIVSCLARILQFLQQPLQLIPLGERQEEYLEDLAHI WSRLKYFYHKEAFLNLLELWYRLKQHIDNYTGGSDPDANEFEEDEEEEDD APKEQYVENALKLLRLLACMVIKAENSDLQEIGDEKVQLFVSALKAGKEE AIFSRALECLKDKVAKESGQA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30467-PA | 521 | CG30467-PA | 1..521 | 1..521 | 2658 | 100 | Plus |