BDGP Sequence Production Resources |
Search the DGRC for LD40702
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 407 |
Well: | 2 |
Vector: | pOT2 |
Associated Gene/Transcript | Papst2-RA |
Protein status: | LD40702.pep: gold |
Preliminary Size: | 1651 |
Sequenced Size: | 1552 |
Gene | Date | Evidence |
---|---|---|
CG7853 | 2001-11-29 | Blastp of sequenced clone |
CG7853 | 2003-01-01 | Sim4 clustering to Release 3 |
Papst2 | 2008-04-29 | Release 5.5 accounting |
Papst2 | 2008-08-15 | Release 5.9 accounting |
Papst2 | 2008-12-18 | 5.12 accounting |
1552 bp (1552 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069640
> LD40702.complete CTCAGTTCTAAGCTGACAAAAATAGTTTATTTGTGGTAAACAAACATTTA GCCAGGGCAATTTGCACCCAACAGAAATCTCCACGCCGGCCCGTGATTAA TGCAGCATCCGAGGAGGCATGACAAATCCGCACTTTAAACCGACAACTCC GCGGACAGCGTGGCATTGAATTACACGGGCTCCCTGGAAATATAATCTTG AAATAGCCACTATATAGTGTGTATATGTATATAGACACATCCGCTAGCAG CAGAATGACCGATAATAAGGGGAGCGTTATCACCATTAATGGCGGCGAAT CGGCGGGAAACTCGCCGCCCTCGCAGCGGAAGTCCTCGACGTCGGAATCT CCGCCGGAACTCCGTATCCTTTGCTTTGACCTCACCTACTACAATCGCAC AACTCAGTTCCTGCTCAGCTGCGCCGGCGTCTTCTTCCTGTACATCCTGT ACGGCTATCTGCAGGAGCTGATCTTCACCGTCGAAGGATTCAAACCCTAC GGATGGTTCCTCACGCTCGTCCAGTTTGGCTACTACATCGGCTTCGGTTT GGTGGAGCGGCGGCTGGAGGGCTATCGGATAAGCGGCGGTTCCTTTTGGA ACATTGAGCCGGAGCCACGTTGCATTCCCATGAGAACATACCTAATTCTG GCTGCTCTCACGCTGGGTACCATGGGTCTGTCCAACTCAAGTCTCGGCTA CCTGAACTATCCCACCCAGGTGATTTTCAAGTGCTGCAAGCTCATTCCCG TGCTGGTGGGCAGCATCCTCATACAGGGCAAACGCTACGGACTGCTGGAC TTTGCGGCAGCCACCTGCATGTGCATCGGATTGGCCTGGTTCACGCTGGC CGACTCCCAGATGACGCCCAATTTCAATCTGCTTGGTGTGGCCATGATTT CGGGAGCGCTGCTCTGCGACGCAGCCATTGGCAATGTCCAGGAGAAGGCG ATGCGGGAATTCAAGGCGCCCAGCAGTGAGGTGGTGTTCTACTCATACGG CTTGGGTTTTGTGTACCTATTTGTGATTATGCTGGTTACCGGCAACTTCT TCAGCGGCTTTGCATTCTGTTTGGAGCATCCCGTTGAGACCTTCGGCTAT GGCTTCCTCTTTAGTTTGTCCGGCTATCTGGGCATTCAGTTTGTGCTGGC TCTGGTGAGGAGTAGTGGTGCCCCCATAGCTGCCACAGTGACCACCGCCC GCAAGGCTGTGACTATAGCCTTCTCCTTTGTGCTTTTCAGCAAGCCCTTT ACCTTACAATATCTGTGGTCGGGCCTCATCGTTGTCCTGGGCATATATCT CAATGTCTACAGCAAGAGGAACAAGCTGACGTTGGCCGACGTCCGGCAGA GAATAAAGCAATTTGGAGCCAAGGTTGCCCGCTCACCGAGTCGCAAATTC CTCATCGAAGTTTAGAACGATACCAAAAACACTCACATTTTAGTTGAATT GGAAGCATGGGTTTTCTATAAGAAAACCATTAAATATAATTACTTAATTA CATTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Papst2-RA | 1737 | Papst2-RA | 156..1668 | 1..1513 | 7550 | 99.9 | Plus |
CG14057-RB | 686 | CG14057-RB | 528..686 | 1513..1355 | 780 | 99.3 | Minus |
CG14057-RA | 744 | CG14057-RA | 586..744 | 1513..1355 | 780 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 17032306..17033381 | 1..1076 | 5365 | 99.9 | Plus |
chr3L | 24539361 | chr3L | 17033682..17033929 | 1259..1506 | 1240 | 100 | Plus |
chr3L | 24539361 | chr3L | 17033436..17033619 | 1075..1258 | 905 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 17042842..17043917 | 1..1076 | 5380 | 100 | Plus |
3L | 28110227 | 3L | 17044218..17044472 | 1259..1513 | 1260 | 99.6 | Plus |
3L | 28110227 | 3L | 17043972..17044155 | 1075..1258 | 920 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 17035942..17037017 | 1..1076 | 5380 | 100 | Plus |
3L | 28103327 | 3L | 17037318..17037572 | 1259..1513 | 1260 | 99.6 | Plus |
3L | 28103327 | 3L | 17037072..17037255 | 1075..1258 | 920 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 591..626 | 249..214 | 117 | 80.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 17032306..17033381 | 1..1076 | 99 | -> | Plus |
chr3L | 17033438..17033619 | 1077..1258 | 99 | -> | Plus |
chr3L | 17033682..17033929 | 1259..1506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papst2-RA | 1..1191 | 225..1415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papst2-RA | 1..1191 | 225..1415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papst2-RA | 1..1191 | 225..1415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papst2-RA | 1..1191 | 225..1415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papst2-RA | 1..1191 | 225..1415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papst2-RA | 41..1546 | 1..1506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papst2-RA | 41..1546 | 1..1506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papst2-RA | 46..1551 | 1..1506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papst2-RA | 41..1546 | 1..1506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papst2-RA | 46..1551 | 1..1506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17042842..17043917 | 1..1076 | 100 | -> | Plus |
3L | 17043974..17044155 | 1077..1258 | 100 | -> | Plus |
3L | 17044218..17044465 | 1259..1506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17042842..17043917 | 1..1076 | 100 | -> | Plus |
3L | 17043974..17044155 | 1077..1258 | 100 | -> | Plus |
3L | 17044218..17044465 | 1259..1506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17042842..17043917 | 1..1076 | 100 | -> | Plus |
3L | 17043974..17044155 | 1077..1258 | 100 | -> | Plus |
3L | 17044218..17044465 | 1259..1506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 17035942..17037017 | 1..1076 | 100 | -> | Plus |
arm_3L | 17037074..17037255 | 1077..1258 | 100 | -> | Plus |
arm_3L | 17037318..17037565 | 1259..1506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17035942..17037017 | 1..1076 | 100 | -> | Plus |
3L | 17037074..17037255 | 1077..1258 | 100 | -> | Plus |
3L | 17037318..17037565 | 1259..1506 | 100 | Plus |
Translation from 224 to 1414
> LD40702.pep MYIDTSASSRMTDNKGSVITINGGESAGNSPPSQRKSSTSESPPELRILC FDLTYYNRTTQFLLSCAGVFFLYILYGYLQELIFTVEGFKPYGWFLTLVQ FGYYIGFGLVERRLEGYRISGGSFWNIEPEPRCIPMRTYLILAALTLGTM GLSNSSLGYLNYPTQVIFKCCKLIPVLVGSILIQGKRYGLLDFAAATCMC IGLAWFTLADSQMTPNFNLLGVAMISGALLCDAAIGNVQEKAMREFKAPS SEVVFYSYGLGFVYLFVIMLVTGNFFSGFAFCLEHPVETFGYGFLFSLSG YLGIQFVLALVRSSGAPIAATVTTARKAVTIAFSFVLFSKPFTLQYLWSG LIVVLGIYLNVYSKRNKLTLADVRQRIKQFGAKVARSPSRKFLIEV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10102-PA | 389 | GF10102-PA | 2..389 | 8..396 | 1801 | 88.8 | Plus |
Dana\GF17812-PA | 459 | GF17812-PA | 110..458 | 25..385 | 184 | 21.6 | Plus |
Dana\GF23157-PA | 343 | GF23157-PA | 7..316 | 60..366 | 182 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13603-PA | 386 | GG13603-PA | 1..386 | 11..396 | 1982 | 97.7 | Plus |
Dere\GG22340-PA | 464 | GG22340-PA | 106..463 | 19..385 | 183 | 22.5 | Plus |
Dere\GG24421-PA | 339 | GG24421-PA | 7..323 | 60..375 | 177 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16468-PA | 409 | GH16468-PA | 5..409 | 9..396 | 1657 | 79 | Plus |
Dgri\GH18184-PA | 341 | GH18184-PA | 7..302 | 60..354 | 167 | 27.1 | Plus |
Dgri\GH18093-PA | 463 | GH18093-PA | 138..462 | 57..385 | 167 | 22.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Papst2-PA | 396 | CG7853-PA | 1..396 | 1..396 | 2044 | 100 | Plus |
sll-PB | 465 | CG7623-PB | 107..464 | 19..385 | 212 | 21.7 | Plus |
sll-PA | 465 | CG7623-PA | 107..464 | 19..385 | 212 | 21.7 | Plus |
meigo-PB | 338 | CG5802-PB | 7..321 | 60..371 | 210 | 25.6 | Plus |
meigo-PA | 338 | CG5802-PA | 7..321 | 60..371 | 210 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12140-PA | 318 | GI12140-PA | 7..318 | 85..396 | 1346 | 84 | Plus |
Dmoj\GI10138-PA | 340 | GI10138-PA | 7..317 | 60..367 | 188 | 27.8 | Plus |
Dmoj\GI24592-PA | 469 | GI24592-PA | 129..468 | 24..385 | 180 | 22.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16196-PA | 392 | GL16196-PA | 1..392 | 11..396 | 1788 | 87.8 | Plus |
Dper\GL21514-PA | 460 | GL21514-PA | 104..459 | 28..385 | 186 | 22.8 | Plus |
Dper\GL12272-PA | 343 | GL12272-PA | 7..342 | 60..394 | 175 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20635-PA | 392 | GA20635-PA | 1..392 | 11..396 | 1786 | 87.5 | Plus |
Dpse\GA20487-PA | 460 | GA20487-PA | 104..459 | 28..385 | 186 | 22.8 | Plus |
Dpse\GA19140-PA | 343 | GA19140-PA | 7..342 | 60..394 | 175 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25685-PA | 386 | GM25685-PA | 1..386 | 11..396 | 1990 | 98.7 | Plus |
Dsec\GM15070-PA | 339 | GM15070-PA | 7..322 | 60..372 | 180 | 25.5 | Plus |
Dsec\GM15246-PA | 464 | GM15246-PA | 106..463 | 19..385 | 165 | 21.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14690-PA | 386 | GD14690-PA | 1..386 | 11..396 | 1987 | 98.4 | Plus |
Dsim\GD19404-PA | 339 | GD19404-PA | 7..322 | 60..372 | 180 | 25.5 | Plus |
Dsim\GD19171-PA | 464 | GD19171-PA | 106..463 | 19..385 | 168 | 21.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13419-PA | 402 | GJ13419-PA | 9..402 | 14..396 | 1729 | 84.5 | Plus |
Dvir\GJ23356-PA | 339 | GJ23356-PA | 7..317 | 60..367 | 201 | 28.2 | Plus |
Dvir\GJ22657-PA | 468 | GJ22657-PA | 98..451 | 2..366 | 178 | 20.5 | Plus |
Dvir\GJ14214-PA | 349 | GJ14214-PA | 18..347 | 66..396 | 153 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20462-PA | 395 | GK20462-PA | 1..395 | 11..396 | 1739 | 85.1 | Plus |
Dwil\GK14025-PA | 343 | GK14025-PA | 7..341 | 60..393 | 178 | 24 | Plus |
Dwil\GK12079-PA | 461 | GK12079-PA | 99..460 | 19..385 | 165 | 20.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19898-PA | 386 | GE19898-PA | 1..386 | 11..396 | 1984 | 97.7 | Plus |
Dyak\GE25713-PA | 339 | GE25713-PA | 7..322 | 60..372 | 181 | 25.8 | Plus |
Dyak\GE25483-PA | 464 | GE25483-PA | 106..463 | 19..385 | 181 | 22.5 | Plus |
Translation from 224 to 1414
> LD40702.hyp MYIDTSASSRMTDNKGSVITINGGESAGNSPPSQRKSSTSESPPELRILC FDLTYYNRTTQFLLSCAGVFFLYILYGYLQELIFTVEGFKPYGWFLTLVQ FGYYIGFGLVERRLEGYRISGGSFWNIEPEPRCIPMRTYLILAALTLGTM GLSNSSLGYLNYPTQVIFKCCKLIPVLVGSILIQGKRYGLLDFAAATCMC IGLAWFTLADSQMTPNFNLLGVAMISGALLCDAAIGNVQEKAMREFKAPS SEVVFYSYGLGFVYLFVIMLVTGNFFSGFAFCLEHPVETFGYGFLFSLSG YLGIQFVLALVRSSGAPIAATVTTARKAVTIAFSFVLFSKPFTLQYLWSG LIVVLGIYLNVYSKRNKLTLADVRQRIKQFGAKVARSPSRKFLIEV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Papst2-PA | 396 | CG7853-PA | 1..396 | 1..396 | 2044 | 100 | Plus |
sll-PB | 465 | CG7623-PB | 107..464 | 19..385 | 212 | 21.7 | Plus |
sll-PA | 465 | CG7623-PA | 107..464 | 19..385 | 212 | 21.7 | Plus |
meigo-PB | 338 | CG5802-PB | 7..321 | 60..371 | 210 | 25.6 | Plus |
meigo-PA | 338 | CG5802-PA | 7..321 | 60..371 | 210 | 25.6 | Plus |