BDGP Sequence Production Resources |
Search the DGRC for LD40707
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 407 |
Well: | 7 |
Vector: | pOT2 |
Associated Gene/Transcript | l(1)G0289-RA |
Protein status: | LD40707.pep: gold |
Preliminary Size: | 2366 |
Sequenced Size: | 2341 |
Gene | Date | Evidence |
---|---|---|
CG2221 | 2001-01-01 | Release 2 assignment |
CG2221 | 2001-11-29 | Blastp of sequenced clone |
CG2221 | 2003-01-01 | Sim4 clustering to Release 3 |
l(1)G0289 | 2008-04-29 | Release 5.5 accounting |
l(1)G0289 | 2008-08-15 | Release 5.9 accounting |
l(1)G0289 | 2008-12-18 | 5.12 accounting |
2341 bp (2341 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069641
> LD40707.complete TTGCTCAGCATTCGTACTTTACTTTTCACTCGCAACGGCTGAAATAACGG TTGAACAATGGCGAAGAGTGTCGGTAGTGCGTGCGCGCAAATTGCGATCC TTTTGGCCATCACTTGCAGTGCATCGGAACTTGCGTCGGCCGTGTTGCAT CAGGATACGTACGAGATAGTGGACACAAATCTGCCAAATATTGCCGCATA CGGAGTAGTGCCACTGAGAACGGATCGACTGCACCGTCAAAGACGAACCG TGCCCGTATCGCCACCGTTGCCCGCAGTCACCACATACCGAGGCGCAGTG TCTGCCAATGCCACTGCGGAAGCAGGAGGAGCGGCAGGAGCTGGCGGAGG AGTGGCTGCAGAGACCACGGTCACCACCGTGGACAATAAGGCAGCGGGCG GTAGTGTGTCCTACAATGTGCACAATGTCGGAGTCAATGGCACTGGACAG CGCAAGACATACGATGTGGCACCGGCCGTCGATTCCAATACCACTAGCCA AATGGCGCCGGCTACCAAGAAGCCCACACTATTGGGCCAGTCGGGCAATC CCAAGAAGGTGGCATCTTCTGTCGTCGCTGCAACCATGACGGATCCCTCA CCGGCGGTCATCGATGTGGACGTGTCGAAAGTAGTGGACGTGCCCGAGGA AGAGATCGAGGCAGCGGTGAAGAATGCATCGCTGAAGGAGAGCGTTGACT TCCACGAATACTACAACAGTGTGCTCTATGAGAACAAGGACGAGGTGGCC TCACTGTGGACCGAACTGAAGGCGACGCCCGAAAATATCATGCTTTCGTC GTCCCATCGCAGGGCCATGACGGTGGAGCTCAAGTTTGATTTCCCCTTCT ACGGACACTTTGTGCGCAACATCACGGTGGCCACCGGCGGATTCCTTTAC ACCGGCGAGTATGTCCACTCCTGGCTGGCGGCCACCCAGTACATTGCCCC GCTGATGGCCAATTTCGACACGAGCATGTCCAACGACTCGTTTGTCCGAT TGCATGACAATGGAACCGCCTTCACCGCCGTGTGGGAGAATGTGACGCTG CAGGACAAGCCGGATTTTGGCAAGTTTACGTTCAGCGTGACCCTGTACCA GAGTGGCGACATTGTTTTCGCATACATGCTGGTGCCCACGAACATCAACT CCATCCAGGACAAGGAGCATCCGGTCAAGGTCGGCCTTTCCGACGCCTAC ATTATCGACAAGCAACTATTCTTTGCCCGCCGAAAGACAATCTATGAGTA CCACCGTGTCACGTTCCAGCAGCACGAGATCACCAACAACACCATCATCA AGCTGGCGGCACAGCCCACCTGCCTTGGCTACAATGACTGCAATTCGTGC ATCAACCACAACACTACGTTTACGTGCCTATGGTGCTCGGTGCTGAATCG CTGCTCCACGGGTACCGACCGCAAAAAGCACGAGTGGCTCCAAATGGGAT GTGAGGCTACCGCCATTCATACCAGTAGTTTGTGCCCGGCCCTCGGCGAT AAGGGTAACAATGCTGCCGGCCAGGGTAAGAATGGTTCTGCGAACAGCGG TGCCAGTGCCAATGGTGCGACAAATACCTCAACATCATCCAGCGGCTCAT CCACGCCGGTCACGGAGCCCAGCGTGATGAGTACGAGGGCACCACATGCC ACCGCTTACATTAAGCCGGGAGTGGATCACTCCAGTGATATCCATGCGGA CGGAAAGGTCGGCAATGCCGAGCTATCGAAGGCGGAAGCGGACAACAAGA ATGTGGGCGTAGCCTTTGGCTTCATGGTGCCCATCTGTCTGGTGTTCGCC GTGACGCTGTGGCTCTTCTACGCGTACCGCAATCCGCACACCAAGAGCGG CCAGCTGCTCATCCAGTTCCGTCCCAGCCAGTGGTCATGGAGGCGTGGCG AGGCCCGCTACACGGCGGCCACGATACACATGTAGGAGGTGATTGCCGGA GACGCAGGGTAGGAGGTACAGAGATCGCGAGACGTGGGAGGGAGCTGCAG CTATACCGACGATGAATCAACCAACAAATCAACCAAACGAATTCTGATCC CTGACGGAGCAGTATCGTGAACGCAAGGGGGCACTGCGAACTGAGAAGCA ATCGCCATCAAATACGATTATTTTACAACATGGACATGGATCGACCGAGC ACCGAGCATCAGGTGTAATCCTCCTATCTTTTAAAGACATGAATATTTGA AACCCGTCTGTAATTGTGATGTGTTCCATGATGCGTCCACAATGTCAACC AAAAGACCATTTTTTTGAACTGATTGTTGAGATTTAGCTCAGAACGCTGC CGAAACCGAACAAAACAACAACTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0289.d | 3739 | l(1)G0289.d | 87..2420 | 1..2334 | 11655 | 99.9 | Plus |
l(1)G0289.g | 4604 | l(1)G0289.g | 87..2420 | 1..2334 | 11655 | 99.9 | Plus |
l(1)G0289.e | 5404 | l(1)G0289.e | 87..2420 | 1..2334 | 11655 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 10250784..10251651 | 1013..146 | 4295 | 99.7 | Minus |
chrX | 22417052 | chrX | 10248852..10249311 | 2323..1864 | 2285 | 99.8 | Minus |
chrX | 22417052 | chrX | 10249583..10250002 | 1866..1447 | 2085 | 99.8 | Minus |
chrX | 22417052 | chrX | 10250413..10250623 | 1222..1012 | 1055 | 100 | Minus |
chrX | 22417052 | chrX | 10250195..10250346 | 1374..1223 | 760 | 100 | Minus |
chrX | 22417052 | chrX | 10257619..10257763 | 145..1 | 725 | 100 | Minus |
chrX | 22417052 | chrX | 10250059..10250133 | 1448..1374 | 360 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 10359296..10360163 | 1013..146 | 4340 | 100 | Minus |
X | 23542271 | X | 10357346..10357816 | 2334..1864 | 2340 | 99.8 | Minus |
X | 23542271 | X | 10358086..10358505 | 1866..1447 | 2100 | 100 | Minus |
X | 23542271 | X | 10358918..10359128 | 1222..1012 | 1055 | 100 | Minus |
X | 23542271 | X | 10358700..10358851 | 1374..1223 | 760 | 100 | Minus |
X | 23542271 | X | 10366124..10366268 | 145..1 | 725 | 100 | Minus |
X | 23542271 | X | 10358562..10358636 | 1448..1374 | 375 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 10367394..10368261 | 1013..146 | 4340 | 100 | Minus |
X | 23527363 | X | 10365444..10365914 | 2334..1864 | 2340 | 99.7 | Minus |
X | 23527363 | X | 10366184..10366603 | 1866..1447 | 2100 | 100 | Minus |
X | 23527363 | X | 10367016..10367226 | 1222..1012 | 1055 | 100 | Minus |
X | 23527363 | X | 10366798..10366949 | 1374..1223 | 760 | 100 | Minus |
X | 23527363 | X | 10374222..10374366 | 145..1 | 725 | 100 | Minus |
X | 23527363 | X | 10366660..10366734 | 1448..1374 | 375 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 10250195..10250346 | 1223..1374 | 100 | <- | Minus |
chrX | 10250413..10250622 | 1013..1222 | 100 | <- | Minus |
chrX | 10248852..10249308 | 1867..2323 | 99 | <- | Minus |
chrX | 10249583..10250001 | 1448..1866 | 99 | <- | Minus |
chrX | 10250060..10250132 | 1375..1447 | 98 | <- | Minus |
chrX | 10250785..10251651 | 146..1012 | 99 | <- | Minus |
chrX | 10257619..10257763 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0289-RA | 1..1878 | 58..1935 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0289-RA | 1..1878 | 58..1935 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0289-RA | 1..1878 | 58..1935 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0289-RA | 1..1878 | 58..1935 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0289-RA | 1..1878 | 58..1935 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0289-RA | 46..2368 | 1..2323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0289-RA | 46..2368 | 1..2323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0289-RA | 6..2328 | 1..2323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0289-RA | 46..2368 | 1..2323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0289-RA | 6..2328 | 1..2323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10357357..10357813 | 1867..2323 | 100 | <- | Minus |
X | 10358086..10358504 | 1448..1866 | 100 | <- | Minus |
X | 10358563..10358635 | 1375..1447 | 100 | <- | Minus |
X | 10358700..10358851 | 1223..1374 | 100 | <- | Minus |
X | 10358918..10359127 | 1013..1222 | 100 | <- | Minus |
X | 10359297..10360163 | 146..1012 | 100 | <- | Minus |
X | 10366124..10366268 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10357357..10357813 | 1867..2323 | 100 | <- | Minus |
X | 10358086..10358504 | 1448..1866 | 100 | <- | Minus |
X | 10358563..10358635 | 1375..1447 | 100 | <- | Minus |
X | 10358700..10358851 | 1223..1374 | 100 | <- | Minus |
X | 10358918..10359127 | 1013..1222 | 100 | <- | Minus |
X | 10359297..10360163 | 146..1012 | 100 | <- | Minus |
X | 10366124..10366268 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10357357..10357813 | 1867..2323 | 100 | <- | Minus |
X | 10358086..10358504 | 1448..1866 | 100 | <- | Minus |
X | 10358563..10358635 | 1375..1447 | 100 | <- | Minus |
X | 10358700..10358851 | 1223..1374 | 100 | <- | Minus |
X | 10358918..10359127 | 1013..1222 | 100 | <- | Minus |
X | 10359297..10360163 | 146..1012 | 100 | <- | Minus |
X | 10366124..10366268 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 10251390..10251846 | 1867..2323 | 100 | <- | Minus |
arm_X | 10252119..10252537 | 1448..1866 | 100 | <- | Minus |
arm_X | 10252596..10252668 | 1375..1447 | 100 | <- | Minus |
arm_X | 10252733..10252884 | 1223..1374 | 100 | <- | Minus |
arm_X | 10252951..10253160 | 1013..1222 | 100 | <- | Minus |
arm_X | 10253330..10254196 | 146..1012 | 100 | <- | Minus |
arm_X | 10260157..10260301 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10365455..10365911 | 1867..2323 | 100 | <- | Minus |
X | 10366184..10366602 | 1448..1866 | 100 | <- | Minus |
X | 10366661..10366733 | 1375..1447 | 100 | <- | Minus |
X | 10366798..10366949 | 1223..1374 | 100 | <- | Minus |
X | 10367016..10367225 | 1013..1222 | 100 | <- | Minus |
X | 10367395..10368261 | 146..1012 | 100 | <- | Minus |
X | 10374222..10374366 | 1..145 | 100 | Minus |
Translation from 57 to 1934
> LD40707.pep MAKSVGSACAQIAILLAITCSASELASAVLHQDTYEIVDTNLPNIAAYGV VPLRTDRLHRQRRTVPVSPPLPAVTTYRGAVSANATAEAGGAAGAGGGVA AETTVTTVDNKAAGGSVSYNVHNVGVNGTGQRKTYDVAPAVDSNTTSQMA PATKKPTLLGQSGNPKKVASSVVAATMTDPSPAVIDVDVSKVVDVPEEEI EAAVKNASLKESVDFHEYYNSVLYENKDEVASLWTELKATPENIMLSSSH RRAMTVELKFDFPFYGHFVRNITVATGGFLYTGEYVHSWLAATQYIAPLM ANFDTSMSNDSFVRLHDNGTAFTAVWENVTLQDKPDFGKFTFSVTLYQSG DIVFAYMLVPTNINSIQDKEHPVKVGLSDAYIIDKQLFFARRKTIYEYHR VTFQQHEITNNTIIKLAAQPTCLGYNDCNSCINHNTTFTCLWCSVLNRCS TGTDRKKHEWLQMGCEATAIHTSSLCPALGDKGNNAAGQGKNGSANSGAS ANGATNTSTSSSGSSTPVTEPSVMSTRAPHATAYIKPGVDHSSDIHADGK VGNAELSKAEADNKNVGVAFGFMVPICLVFAVTLWLFYAYRNPHTKSGQL LIQFRPSQWSWRRGEARYTAATIHM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19563-PA | 628 | GF19563-PA | 1..628 | 1..625 | 1916 | 62.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18929-PA | 615 | GG18929-PA | 1..615 | 1..625 | 2760 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12720-PA | 668 | GH12720-PA | 1..668 | 1..625 | 1649 | 53.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0289-PC | 625 | CG2221-PC | 1..625 | 1..625 | 3262 | 100 | Plus |
l(1)G0289-PB | 625 | CG2221-PB | 1..625 | 1..625 | 3262 | 100 | Plus |
l(1)G0289-PA | 625 | CG2221-PA | 1..625 | 1..625 | 3262 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15396-PA | 656 | GI15396-PA | 1..656 | 1..625 | 1761 | 56.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26788-PA | 624 | GL26788-PA | 1..624 | 1..625 | 1652 | 56.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15310-PA | 645 | GA15310-PA | 1..645 | 1..625 | 1983 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11320-PA | 624 | GM11320-PA | 1..624 | 1..625 | 2962 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16040-PA | 624 | GD16040-PA | 1..624 | 1..625 | 2971 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14794-PA | 656 | GJ14794-PA | 1..656 | 1..625 | 1695 | 56.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10263-PA | 618 | GK10263-PA | 1..618 | 1..625 | 1859 | 58.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15399-PA | 619 | GE15399-PA | 1..619 | 1..625 | 2784 | 87.2 | Plus |
Translation from 57 to 1934
> LD40707.hyp MAKSVGSACAQIAILLAITCSASELASAVLHQDTYEIVDTNLPNIAAYGV VPLRTDRLHRQRRTVPVSPPLPAVTTYRGAVSANATAEAGGAAGAGGGVA AETTVTTVDNKAAGGSVSYNVHNVGVNGTGQRKTYDVAPAVDSNTTSQMA PATKKPTLLGQSGNPKKVASSVVAATMTDPSPAVIDVDVSKVVDVPEEEI EAAVKNASLKESVDFHEYYNSVLYENKDEVASLWTELKATPENIMLSSSH RRAMTVELKFDFPFYGHFVRNITVATGGFLYTGEYVHSWLAATQYIAPLM ANFDTSMSNDSFVRLHDNGTAFTAVWENVTLQDKPDFGKFTFSVTLYQSG DIVFAYMLVPTNINSIQDKEHPVKVGLSDAYIIDKQLFFARRKTIYEYHR VTFQQHEITNNTIIKLAAQPTCLGYNDCNSCINHNTTFTCLWCSVLNRCS TGTDRKKHEWLQMGCEATAIHTSSLCPALGDKGNNAAGQGKNGSANSGAS ANGATNTSTSSSGSSTPVTEPSVMSTRAPHATAYIKPGVDHSSDIHADGK VGNAELSKAEADNKNVGVAFGFMVPICLVFAVTLWLFYAYRNPHTKSGQL LIQFRPSQWSWRRGEARYTAATIHM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0289-PC | 625 | CG2221-PC | 1..625 | 1..625 | 3262 | 100 | Plus |
l(1)G0289-PB | 625 | CG2221-PB | 1..625 | 1..625 | 3262 | 100 | Plus |
l(1)G0289-PA | 625 | CG2221-PA | 1..625 | 1..625 | 3262 | 100 | Plus |