BDGP Sequence Production Resources |
Search the DGRC for LD40776
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 407 |
Well: | 76 |
Vector: | pOT2 |
Associated Gene/Transcript | Rae1-RA |
Protein status: | LD40776.pep: gold |
Preliminary Size: | 1328 |
Sequenced Size: | 1201 |
Gene | Date | Evidence |
---|---|---|
CG9862 | 2001-01-01 | Release 2 assignment |
CG9862 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9862 | 2003-01-15 | Blastp of sequenced clone |
Rae1 | 2008-04-29 | Release 5.5 accounting |
Rae1 | 2008-08-15 | Release 5.9 accounting |
Rae1 | 2008-12-18 | 5.12 accounting |
1201 bp (1201 high quality bases) assembled on 2003-01-15
GenBank Submission: AY118568
> LD40776.complete AAATAATACAAACACAAACATTTTGCGGCAACAAAAGCAGAAGAATGTTT GGCGCCACACAATCGACGAACCGAATGAACGACTTCGAGGTCGCCTCGCC GCCGGACGACTCCGTCTCGGCGCTGGAGTTCAGCCCCAGCACGGTGCAGA AGAACTTCCTGGTGGCCGGAAGCTGGGACAGCACGGTCCGCTGCTGGGAG GTGGAACAAAACGGGGCCACTGTGCCCAAGTCGATGAAGACCATGGGCGG ACCGGTGCTGGACGTTTGCTGGTCGGACGACGGCAGCAAAGTGTTCGTCG CCTCCTGCGACAAGCAGGTGAAGCTCTGGGACCTCGCCTCCGATCAAGTG ATGCAAGTGGCGGCCCACGACGGTCCCGTTAAGACGTGCCACATGGTCAA GGGACCCACGTACACCTGCCTCATGACCGGCTCCTGGGACAAGACCCTAA AGTTCTGGGACACCCGTTCGCCCAATCCCATGATGACCATCAATCTACCC GAGCGGTGCTACTGCGCCGATGTGGAGTATCCGATGGCCGTGGTGGGCAC GGCCAACAGAGGACTCATCATATACTCGCTGCAGAATAGCCCAACCGAGT ACAAGCGGCAGGAGAGTCCGCTGAAGTACCAGCACCGTGCCATTTCCATT TTCCGGGACAAGAAAAAAGAGCCCACAGGCTGTGCGCTGGGCAGCATTGA GGGCCGTGTGGCCATTCAGTATGTGAATCCGGGGAATCCAAAAGATAACT TCACCTTCAAGTGCCACCGTACTACGGGCACCTCAGGCTACCAGGATATT TATGCAGTAAATGACATCGCATTCCACCCTGTGCACGGCACCCTGGTGAC CGTTGGCTCAGATGGCACCTTCAGTTTCTGGGACAAGGATGCCCGGACCA AGCTCAAGTCCAGCGAGACCATGGATCAGTCCATTACCAAATGCGGATTT AACGCCAACGGCCAGATATTTGCGTACGCCGTCGGCTACGACTGGTCGAA GGGCCACGAGTACTTCAACCCGGCCAAGAAGCCCCAAATCTTTCTGCGCT CGTGCTACGACGAGCTCAAGCCGCGCATTAACTGATCGGAGGACTACTTT AGCTTTAGTGAAAACCCCTACGCGTACATGTATTGCGAATAAAGTGAATT GGAGCGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA A
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17545215..17545920 | 453..1158 | 99 | <- | Minus |
chr2R | 17545970..17546421 | 1..452 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rae1-RA | 1..1041 | 45..1085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rae1-RA | 1..1041 | 45..1085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rae1-RA | 1..1041 | 45..1085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rae1-RA | 1..1041 | 45..1085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rae1-RA | 1..1041 | 45..1085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rae1-RA | 28..1185 | 1..1158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rae1-RA | 28..1185 | 1..1158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rae1-RA | 32..1189 | 1..1158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rae1-RA | 28..1185 | 1..1158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rae1-RA | 32..1189 | 1..1158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21658770..21659475 | 453..1158 | 100 | <- | Minus |
2R | 21659525..21659976 | 1..452 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21658770..21659475 | 453..1158 | 100 | <- | Minus |
2R | 21659525..21659976 | 1..452 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21658770..21659475 | 453..1158 | 100 | <- | Minus |
2R | 21659525..21659976 | 1..452 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17546275..17546980 | 453..1158 | 100 | <- | Minus |
arm_2R | 17547030..17547481 | 1..452 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21659969..21660674 | 453..1158 | 100 | <- | Minus |
2R | 21660724..21661175 | 1..452 | 100 | Minus |
Translation from 2 to 1084
> LD40776.hyp IIQTQTFCGNKSRRMFGATQSTNRMNDFEVASPPDDSVSALEFSPSTVQK NFLVAGSWDSTVRCWEVEQNGATVPKSMKTMGGPVLDVCWSDDGSKVFVA SCDKQVKLWDLASDQVMQVAAHDGPVKTCHMVKGPTYTCLMTGSWDKTLK FWDTRSPNPMMTINLPERCYCADVEYPMAVVGTANRGLIIYSLQNSPTEY KRQESPLKYQHRAISIFRDKKKEPTGCALGSIEGRVAIQYVNPGNPKDNF TFKCHRTTGTSGYQDIYAVNDIAFHPVHGTLVTVGSDGTFSFWDKDARTK LKSSETMDQSITKCGFNANGQIFAYAVGYDWSKGHEYFNPAKKPQIFLRS CYDELKPRIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rae1-PA | 346 | CG9862-PA | 1..346 | 15..360 | 1884 | 100 | Plus |
CG12782-PA | 336 | CG12782-PA | 4..328 | 16..349 | 675 | 41.6 | Plus |
Bub3-PB | 326 | CG7581-PB | 2..297 | 24..329 | 401 | 32.4 | Plus |
Bub3-PA | 326 | CG7581-PA | 2..297 | 24..329 | 401 | 32.4 | Plus |
Translation from 44 to 1084
> LD40776.pep MFGATQSTNRMNDFEVASPPDDSVSALEFSPSTVQKNFLVAGSWDSTVRC WEVEQNGATVPKSMKTMGGPVLDVCWSDDGSKVFVASCDKQVKLWDLASD QVMQVAAHDGPVKTCHMVKGPTYTCLMTGSWDKTLKFWDTRSPNPMMTIN LPERCYCADVEYPMAVVGTANRGLIIYSLQNSPTEYKRQESPLKYQHRAI SIFRDKKKEPTGCALGSIEGRVAIQYVNPGNPKDNFTFKCHRTTGTSGYQ DIYAVNDIAFHPVHGTLVTVGSDGTFSFWDKDARTKLKSSETMDQSITKC GFNANGQIFAYAVGYDWSKGHEYFNPAKKPQIFLRSCYDELKPRIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11632-PA | 336 | GF11632-PA | 1..336 | 11..346 | 1760 | 94.3 | Plus |
Dana\GF13306-PA | 373 | GF13306-PA | 23..362 | 9..343 | 714 | 42.1 | Plus |
Dana\GF22876-PA | 326 | GF22876-PA | 5..297 | 13..315 | 412 | 32.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20758-PA | 346 | GG20758-PA | 1..346 | 1..346 | 1870 | 98.8 | Plus |
Dere\GG20054-PA | 335 | GG20054-PA | 11..330 | 10..335 | 689 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23041-PA | 347 | GH23041-PA | 1..347 | 1..346 | 1746 | 90.8 | Plus |
Dgri\GH18686-PA | 326 | GH18686-PA | 4..316 | 12..335 | 395 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rae1-PA | 346 | CG9862-PA | 1..346 | 1..346 | 1884 | 100 | Plus |
CG12782-PA | 336 | CG12782-PA | 4..328 | 2..335 | 675 | 41.6 | Plus |
Bub3-PB | 326 | CG7581-PB | 2..297 | 10..315 | 401 | 32.4 | Plus |
Bub3-PA | 326 | CG7581-PA | 2..297 | 10..315 | 401 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21110-PA | 349 | GI21110-PA | 1..349 | 1..346 | 1757 | 92.3 | Plus |
Dmoj\GI24196-PA | 326 | GI24196-PA | 4..297 | 12..315 | 399 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11275-PA | 347 | GL11275-PA | 1..347 | 1..346 | 1766 | 92.2 | Plus |
Dper\GL26269-PA | 255 | GL26269-PA | 16..189 | 14..181 | 419 | 47.7 | Plus |
Dper\GL13583-PA | 326 | GL13583-PA | 5..297 | 13..315 | 404 | 33.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22080-PA | 347 | GA22080-PA | 1..347 | 1..346 | 1766 | 92.2 | Plus |
Dpse\GA20454-PA | 326 | GA20454-PA | 5..297 | 13..315 | 404 | 33.2 | Plus |
Dpse\GA28102-PA | 214 | GA28102-PA | 19..193 | 9..168 | 319 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15702-PA | 346 | GM15702-PA | 1..346 | 1..346 | 1885 | 100 | Plus |
Dsec\GM15568-PA | 336 | GM15568-PA | 11..328 | 10..335 | 672 | 41.7 | Plus |
Dsec\GM12232-PA | 326 | GM12232-PA | 5..297 | 13..315 | 416 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25180-PA | 173 | GD25180-PA | 1..167 | 1..167 | 901 | 100 | Plus |
Dsim\GD25070-PA | 336 | GD25070-PA | 11..328 | 10..335 | 673 | 41.7 | Plus |
Dsim\GD17697-PA | 326 | GD17697-PA | 5..297 | 13..315 | 416 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20959-PA | 349 | GJ20959-PA | 1..349 | 1..346 | 1757 | 92.3 | Plus |
Dvir\GJ20971-PA | 333 | GJ20971-PA | 7..333 | 13..344 | 1002 | 54.8 | Plus |
Dvir\GJ10544-PA | 326 | GJ10544-PA | 4..297 | 12..315 | 404 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19577-PA | 348 | GK19577-PA | 1..348 | 1..346 | 1760 | 92.2 | Plus |
Dwil\GK11174-PA | 326 | GK11174-PA | 5..297 | 13..315 | 391 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13690-PA | 346 | GE13690-PA | 1..346 | 1..346 | 1870 | 98.8 | Plus |
Dyak\GE11590-PA | 337 | GE11590-PA | 10..335 | 9..335 | 681 | 42 | Plus |
Dyak\GE10441-PA | 326 | GE10441-PA | 5..297 | 13..315 | 414 | 32.7 | Plus |