BDGP Sequence Production Resources |
Search the DGRC for LD40777
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 407 |
Well: | 77 |
Vector: | pOT2 |
Associated Gene/Transcript | PCID2-RA |
Protein status: | LD40777.pep: gold |
Preliminary Size: | 1492 |
Sequenced Size: | 1314 |
Gene | Date | Evidence |
---|---|---|
CG7351 | 2001-01-01 | Release 2 assignment |
CG7351 | 2001-09-19 | Blastp of sequenced clone |
CG7351 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7351 | 2008-04-29 | Release 5.5 accounting |
CG7351 | 2008-08-15 | Release 5.9 accounting |
CG7351 | 2008-12-18 | 5.12 accounting |
1314 bp (1314 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058688
> LD40777.complete CTACCATCTCTAATTTTGCCGCCTGCGAAAAACACAAACAATGTTCGGCA CCGTAAATAACTATTTATCCGGCGTTTTGCACGCCGCCCAGGATTTAGAT GGCGAGTCCTTGGCCACGTATCTCTCCTTACGAGACGTGCACGTTCAGAA CCACAATTTGTACATTGCCCAGCCGGAAAAGTTGGTGGATCGATTCCTGA AACCGCCACTGGACGAAGTTGTGTCCGCCCACCTGAAGGTGCTGTATCAC CTGGCACAGGAGCCTCCTGGTTACATGGAAGCCTACACCCAACAGTCGGC AGCCTGCGGAGCCGTTGTGAGGCTTTTGCAGCAGCTGAAGGACGAGAATT GGTGCCTGCCACTAATGTACCGCGTGTGCCTGGATCTAAGGTACTTGGCG CAGGCCTGCGAGAAGCATTGTCAAGGATTCACACCTGGCCACGTATTGGA GAAGGCTGCCGACTGCATAATGGCCTGTTTCCGCGTTTGTGCCGCTGATG GACGAGCTTCAGAGGAGGACACCAAGCGTCTGGGCATGATGAACCTCGTA AACCAGCTATTCAAGATTTATTTTCGAATCAACAAGTTGCATCTGTGCAA GCCCCTTATCCGTGCCATCGATAATTGCATCTTCAAGGATTCTTTTCCGC TGCCGGAGCAAATTACCTACAAGTATTTTGTAGGTAGACGGGCTATGTTC GACTCCAACTACCAGGCAGCCGTACAGTATCTGTCGTATGCCTTTAGCAA CTGCCCGGATCGGTTTGCCAGCAACAAGAGGCTCATCCTCATCTATTTGG TGCCAGTGAAGATGCTGCTGGGATATCTGCCCAGCAAATCCTTACTGCAG CGCTACGATCTCCTGCTGTTTCTCGATCTGGCTATGGCCATGAAGGCTGG CAATGTGAATCGCTTTGATGAGATTGTCAGGGACCAGGAGCTGGTGCTGA TCAGGAGTGGTATCTATCTGCTGGTGGAGAAGCTCAAGTTCCTCGTGTAT CGCAACCTGTTCAAGAAGGTGTTCGTCATCCGGAAATCGCATCAGTTGGA CATGGGTGACTTCCTCTCCGCCTTGCATTTCGTTGGCTTAACCGATGTTT CTCTGGACGAGACGCACTGCATCGTGGCCAATCTCATTTACGATGGAAAG ATTAAGGGGTACATCTCACATGCTCACAACAAACTGGTCGTGTCGAAGCA AAATCCATTCCCCTCAGTGTCCCTTTAGTGCATTTTGTAATTATTGTGAA TTTTTAAGAGTAAAAGAATCCAATTTAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PCID2-RA | 1281 | PCID2-RA | 1..1278 | 1..1278 | 6390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11617346..11618621 | 1..1276 | 6320 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11626440..11627717 | 1..1278 | 6390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11619540..11620817 | 1..1278 | 6390 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11617346..11618621 | 1..1276 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7351-RA | 1..1188 | 41..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PCID2-RA | 1..1188 | 41..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PCID2-RA | 1..1188 | 41..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7351-RA | 1..1188 | 41..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PCID2-RA | 1..1188 | 41..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7351-RA | 1..1276 | 1..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PCID2-RA | 1..1276 | 1..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PCID2-RA | 1..1275 | 2..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7351-RA | 1..1276 | 1..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PCID2-RA | 1..1275 | 2..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11626440..11627715 | 1..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11626440..11627715 | 1..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11626440..11627715 | 1..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11619540..11620815 | 1..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11619540..11620815 | 1..1276 | 100 | Plus |
Translation from 40 to 1227
> LD40777.pep MFGTVNNYLSGVLHAAQDLDGESLATYLSLRDVHVQNHNLYIAQPEKLVD RFLKPPLDEVVSAHLKVLYHLAQEPPGYMEAYTQQSAACGAVVRLLQQLK DENWCLPLMYRVCLDLRYLAQACEKHCQGFTPGHVLEKAADCIMACFRVC AADGRASEEDTKRLGMMNLVNQLFKIYFRINKLHLCKPLIRAIDNCIFKD SFPLPEQITYKYFVGRRAMFDSNYQAAVQYLSYAFSNCPDRFASNKRLIL IYLVPVKMLLGYLPSKSLLQRYDLLLFLDLAMAMKAGNVNRFDEIVRDQE LVLIRSGIYLLVEKLKFLVYRNLFKKVFVIRKSHQLDMGDFLSALHFVGL TDVSLDETHCIVANLIYDGKIKGYISHAHNKLVVSKQNPFPSVSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25277-PA | 396 | GF25277-PA | 1..393 | 1..393 | 1908 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15516-PA | 395 | GG15516-PA | 1..395 | 1..395 | 2017 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14860-PA | 396 | GH14860-PA | 1..393 | 1..393 | 1859 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PCID2-PA | 395 | CG7351-PA | 1..395 | 1..395 | 2060 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13711-PA | 396 | GI13711-PA | 1..393 | 1..393 | 1868 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16271-PA | 396 | GL16271-PA | 1..391 | 1..391 | 1727 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20286-PA | 396 | GA20286-PA | 1..391 | 1..391 | 1727 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25285-PA | 395 | GM25285-PA | 1..395 | 1..395 | 2063 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14316-PA | 395 | GD14316-PA | 1..395 | 1..395 | 2063 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14053-PA | 396 | GJ14053-PA | 1..393 | 1..393 | 1880 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17175-PA | 397 | GK17175-PA | 1..392 | 1..391 | 1828 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21831-PA | 395 | GE21831-PA | 1..395 | 1..395 | 2026 | 95.7 | Plus |
Translation from 40 to 1227
> LD40777.hyp MFGTVNNYLSGVLHAAQDLDGESLATYLSLRDVHVQNHNLYIAQPEKLVD RFLKPPLDEVVSAHLKVLYHLAQEPPGYMEAYTQQSAACGAVVRLLQQLK DENWCLPLMYRVCLDLRYLAQACEKHCQGFTPGHVLEKAADCIMACFRVC AADGRASEEDTKRLGMMNLVNQLFKIYFRINKLHLCKPLIRAIDNCIFKD SFPLPEQITYKYFVGRRAMFDSNYQAAVQYLSYAFSNCPDRFASNKRLIL IYLVPVKMLLGYLPSKSLLQRYDLLLFLDLAMAMKAGNVNRFDEIVRDQE LVLIRSGIYLLVEKLKFLVYRNLFKKVFVIRKSHQLDMGDFLSALHFVGL TDVSLDETHCIVANLIYDGKIKGYISHAHNKLVVSKQNPFPSVSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PCID2-PA | 395 | CG7351-PA | 1..395 | 1..395 | 2060 | 100 | Plus |