Clone LD40824 Report

Search the DGRC for LD40824

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:408
Well:24
Vector:pOT2
Associated Gene/Transcriptwdn-RA
Protein status:LD40824.pep: gold
Preliminary Size:3309
Sequenced Size:3176

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1454 2001-01-01 Release 2 assignment
CG1454 2001-09-19 Blastp of sequenced clone
CG1454 2003-01-01 Sim4 clustering to Release 3
wdn 2008-04-29 Release 5.5 accounting
wdn 2008-08-15 Release 5.9 accounting
wdn 2008-12-18 5.12 accounting

Clone Sequence Records

LD40824.complete Sequence

3176 bp (3176 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058690

> LD40824.complete
ACAAAAACAACAAAGCCAAGGCGCATTTCACAATAATTAAATGTTTTTCG
ATCAATTGCGGCGCGTTTAATACAACGAAAGCGATCGCGATGAGTGAATT
GGGGACCCAGTGACCGGGCAACGGCGACCAGTGAACGCAAAGCGTCAGCG
GCGCGGCGAACAAAGACAAAATACGGCGAGCGAAAACGCCGACCGCATAA
CCTGTACGTGTAAGCAAGGCAAGGCGAATGGAAGGCGGCAAGGGCGAGGG
CAAGAGAATGAAAGAGGAGGCGCCAAGCAAGAAGTTGCCGCCTAAAATCT
ACGGCGGCGATGCGGGCACCCCCACGAAGGCGGCCCACGACGAGATACTC
AGCTCTCTGCTGCGGATCAACAACTTCGACTCGATATCGAGCATCAAGGA
CGAGTCGCTGGACATCGATCTGTCGGCGTGCGTGACCATCAGCTCCGCCA
GCCTGGTCAATGGTAACAGTCTCTCCTCCACCGACTTTTGGCGCGTTTTG
GACGAGAGTGCCCAGAACAACACCGAGCTGAATCTATCCTCGGACGTCTG
CCGCGATGACTTGGCTGCCACCAGCTCGTCAACCGTGCCCAGCACTCTGA
CCAGTGATAACCACTCCAGCTCGGAGTTTAGTGTGACTTTCCTGCGGCCC
GAGCCCCCGAATGCTTTCACTAATTCCCCGTTTAAGAAGACTTCGTCCAG
CGGCACCTCCACACCCGTAAAGCTATCGCCCGAGCAGCTCCACCAGCAGC
ATCAGCTCCAAATGCCCCAGTCTCAGCTGCTGCAACGCAAGCCAAAGCTG
CCGGCGGCGACGGCGGTGCGTCTGAAGGTCTTTAAGGAGGAGCCGCCCGA
GGAGAAGCATCCGCCGGAGCAAGTGGTCACCAAGGTAGAGGTGTGCGAGT
CTGAGCTGCTGCCGCCATCGTTTACCATATTCCAGCAGGCCAAATCGGCT
GAATCGGTGGCGGATGCGGCTAGCATGCCGCCTCCGGCTGCTTCGGAAAC
GAAGCCGTTGGAGGTGGACCCGGCACCTCTACACAAGTGTCTCGACTGCA
ACGGACTGCTGCTGGAGACGCCCGATGAGGTGGCCAAGCATGAGGCGGCC
GCTCACAGGCTGAGGCTCACCTATCGTTGCAGCGAGTGCCAGCGGGAATT
CGAGTTGTTGGCTGGTTTGAAGAAGCACCTAAAGACGCACCGCACCGAGG
GCCGCAAGGACACCTGGAAGAAGTGTCCTGACTGCGGCAAGTGCCTCAAA
TTGGGAAGCATGTGGATGCATCGGAAGATTCACAGCGATAACAAGAAGTA
CCAGTGCGACATCTGCGGCCAAAAGTTTGTGCAAAAAATAAACCTCACGC
ACCACGCACGGATTCACTCATCGGAGAAGCCGTACGAGTGTCCCGAGTGT
CAGAAGCGATTCCAGGAGCGCTCACATCTGCAGCGCCACCAGAAGTACCA
TGCGCAAACGCGTTCCTATCGTTGCGAAAAGTGCGGCAAGATGTACAAAA
CGGAGCGCTGTCTCAAGGTCCACAACTTGGTGCATCTTGAGCAGCGACCA
TTCGCGTGCACAGTGTGCGACAAGAGCTTCATCAGCAATTCGAAGCTTAA
GCAGCACTCCAACATACACACAGGAATGCGCCCGTTCAAATGCAATTATT
GTCCGCGAGACTTCACCAACTTCCCCAATTGGTTGAAGCACACGAGACGC
CGACACAAGGTGGACCACAAAACGGGCGAACACCTCGAGAACATTCCCTC
CTACTGCTCTAAAAAGTCCACTACAAACAAGGCCCAAAAGGCAGCCGCGG
CAGCAGCAGCAGCGGCGGCAGCATCTTCAGCTGTGAATCCCAACGAACTC
TCCGCTTCTAGTGAACTTAAAGCCAAGGCTAATCTTACGTCTACTGCTGC
ACCGGCTCCTGCAAAACAAGCGCGGAAAAAGAAGCAGCCGCAGCAGGCCA
CTCTTGCTGCATTGGGAATAACTCTACCTGCCGGTACTGCTCTGCAGCAA
GTGCATCCTGTGCCGCTGGCGCAACAGCATCAGCAGGAACTTACCACTGT
GCTGGTGCCGCTGGCCCCGCCGGCTCCTAAGCAGACCAAAGCCAAGCGAG
AACGAAAGCAGCTAGCACCGAAGCAACTGCAGCAAAAACCGCAGCTGCTG
CAACAGGGCCAACCCCAGCAGTCCAGCTTAGAGCCCATTCCTGCTGTGCC
GCAAATCAAGAAGGAGCCAGTGCAGACTCAGGGTCCGTTCCTTGACTTAC
ACGGTCTTAGTCTGACTTCAGCCGAAGAGCTGATCATGGAGCAGGCCCTG
GAGATGGAGGAGTGCGGTCTGTACGATGCTCCTAATGCAAACACTGAAAT
GGGGACGTCGGACAACGCCATTTCCGATTCGGCCGCTGCCCTGCACTTCC
AGATAAAGAATGAATTACCGGACGAGCTGTTGCCAGACGATGACTTCTTG
CCTTGTAAGCCCAGCGACCGACTACCTTGCCCCTCACTGGAGTCCTCGCC
GTTTTCGTCACCCGCCTCCATGGAGCTGACCGCTGTCTCATGCGCCTCCA
GTGTCGCCATATCGACGAATGCTCTACCAGTGCGATCTGGGAACTACTAT
CTACCCGCCTTTACGCTGAATGCACACGGAAAGCTTAGTAGTACGGGCAA
TGGTGTTCAGTCTGTGACCACGAGCTTGGCCCAGACACCCTCTGTGTCCA
TGGTGAATGTGCCTCTTCTGGTGAGATCCAATCAGATGCTGCCCTCAGTT
GACACGCTACTCTTCACCAACCAGACAGGCGGAAGTCGATTCTTTGCGGG
GAAATCGGCGACTGCGGCCACGCCGCATCTGACATGATCGGGCGGCGGAA
TCTGCTGCCTGCCAACATCAACGCCTCAACGATCTCCTGTGTCTTAGTTA
AGTTAGCAGTGTCGACCATGTTGCACCAGCGCAATTGGGCGGTCGCGGAC
CGATGGCAATCGATTAAAAGAATACGGAATTGTTTCCCGTAGGTAATTAA
GAGTATGACGCTACATTTGTTTAAGTAATTGACGTAAGCTGATTTCTGCA
TAGCCCGTAAGTGTAATTGAGTGTACATATAAACGATTATATATAGATAC
ATAATGATAGATCTTTAATTTGTACGCTTCACACCAATAATAAATTTCGT
ACATATTTTAAAAAAAAAAAAAAAAA

LD40824.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:17:29
Subject Length Description Subject Range Query Range Score Percent Strand
wdn-RA 3230 wdn-RA 63..3222 1..3160 15800 100 Plus
wdn.a 3137 wdn.a 27..2746 1..2720 13600 100 Plus
wdn.a 3137 wdn.a 2746..3132 2774..3160 1935 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:40:15
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 24633060..24634302 1243..1 6185 99.8 Minus
chr3R 27901430 chr3R 24631795..24633000 2448..1243 5910 99.3 Minus
chr3R 27901430 chr3R 24630973..24631683 3159..2449 3540 99.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:35:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:40:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28810070..28811312 1243..1 6215 100 Minus
3R 32079331 3R 28808805..28810010 2448..1243 6030 100 Minus
3R 32079331 3R 28807982..28808693 3160..2449 3560 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:40:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 28550901..28552143 1243..1 6215 100 Minus
3R 31820162 3R 28549636..28550841 2448..1243 6030 100 Minus
3R 31820162 3R 28548813..28549524 3160..2449 3560 100 Minus
Blast to na_te.dros performed 2019-03-16 05:40:14
Subject Length Description Subject Range Query Range Score Percent Strand
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 122..242 712..833 121 57.7 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 9152..9272 712..833 121 57.7 Plus

LD40824.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:41:03 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 24630973..24631683 2449..3159 99 <- Minus
chr3R 24631795..24632999 1244..2448 96 <- Minus
chr3R 24633060..24634302 1..1243 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:23:14 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
wdn-RA 1..2610 228..2837 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:59:43 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
wdn-RA 1..2610 228..2837 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:12:18 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
wdn-RA 1..2610 228..2837 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:30:07 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
wdn-RA 1..2610 228..2837 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:09:16 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
wdn-RA 1..2610 228..2837 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:46:54 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
wdn-RA 27..3185 1..3159 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:59:42 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
wdn-RA 16..3174 1..3159 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:12:18 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
wdn-RA 26..3184 1..3159 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:30:07 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
wdn-RA 27..3185 1..3159 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:09:16 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
wdn-RA 26..3184 1..3159 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:41:03 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28807983..28808693 2449..3159 100 <- Minus
3R 28808805..28810009 1244..2448 100 <- Minus
3R 28810070..28811312 1..1243 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:41:03 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28807983..28808693 2449..3159 100 <- Minus
3R 28808805..28810009 1244..2448 100 <- Minus
3R 28810070..28811312 1..1243 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:41:03 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28807983..28808693 2449..3159 100 <- Minus
3R 28808805..28810009 1244..2448 100 <- Minus
3R 28810070..28811312 1..1243 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:12:18 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24633705..24634415 2449..3159 100 <- Minus
arm_3R 24634527..24635731 1244..2448 100 <- Minus
arm_3R 24635792..24637034 1..1243 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:06:28 Download gff for LD40824.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28548814..28549524 2449..3159 100 <- Minus
3R 28549636..28550840 1244..2448 100 <- Minus
3R 28550901..28552143 1..1243 100   Minus

LD40824.pep Sequence

Translation from 227 to 2836

> LD40824.pep
MEGGKGEGKRMKEEAPSKKLPPKIYGGDAGTPTKAAHDEILSSLLRINNF
DSISSIKDESLDIDLSACVTISSASLVNGNSLSSTDFWRVLDESAQNNTE
LNLSSDVCRDDLAATSSSTVPSTLTSDNHSSSEFSVTFLRPEPPNAFTNS
PFKKTSSSGTSTPVKLSPEQLHQQHQLQMPQSQLLQRKPKLPAATAVRLK
VFKEEPPEEKHPPEQVVTKVEVCESELLPPSFTIFQQAKSAESVADAASM
PPPAASETKPLEVDPAPLHKCLDCNGLLLETPDEVAKHEAAAHRLRLTYR
CSECQREFELLAGLKKHLKTHRTEGRKDTWKKCPDCGKCLKLGSMWMHRK
IHSDNKKYQCDICGQKFVQKINLTHHARIHSSEKPYECPECQKRFQERSH
LQRHQKYHAQTRSYRCEKCGKMYKTERCLKVHNLVHLEQRPFACTVCDKS
FISNSKLKQHSNIHTGMRPFKCNYCPRDFTNFPNWLKHTRRRHKVDHKTG
EHLENIPSYCSKKSTTNKAQKAAAAAAAAAAASSAVNPNELSASSELKAK
ANLTSTAAPAPAKQARKKKQPQQATLAALGITLPAGTALQQVHPVPLAQQ
HQQELTTVLVPLAPPAPKQTKAKRERKQLAPKQLQQKPQLLQQGQPQQSS
LEPIPAVPQIKKEPVQTQGPFLDLHGLSLTSAEELIMEQALEMEECGLYD
APNANTEMGTSDNAISDSAAALHFQIKNELPDELLPDDDFLPCKPSDRLP
CPSLESSPFSSPASMELTAVSCASSVAISTNALPVRSGNYYLPAFTLNAH
GKLSSTGNGVQSVTTSLAQTPSVSMVNVPLLVRSNQMLPSVDTLLFTNQT
GGSRFFAGKSATAATPHLT*

LD40824.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:36:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16427-PA 883 GF16427-PA 4..883 5..869 3518 82.3 Plus
Dana\GF14340-PA 593 GF14340-PA 332..525 299..491 379 36.2 Plus
Dana\GF10403-PA 578 GF10403-PA 323..517 301..501 363 35.8 Plus
Dana\GF17536-PA 547 GF17536-PA 281..473 301..493 357 36.9 Plus
Dana\GF17156-PA 633 GF17156-PA 375..590 269..488 348 31.7 Plus
Dana\GF17156-PA 633 GF17156-PA 235..554 183..515 322 31.1 Plus
Dana\GF10403-PA 578 GF10403-PA 234..425 301..490 278 30.2 Plus
Dana\GF17536-PA 547 GF17536-PA 312..468 271..460 205 25.8 Plus
Dana\GF10403-PA 578 GF10403-PA 377..575 299..468 195 28.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:36:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12054-PA 872 GG12054-PA 1..872 1..869 4517 96.9 Plus
Dere\GG25148-PA 606 GG25148-PA 342..535 299..491 377 35.7 Plus
Dere\GG17297-PA 622 GG17297-PA 352..544 301..493 353 38.8 Plus
Dere\GG20836-PA 636 GG20836-PA 380..595 269..488 344 32.1 Plus
Dere\GG21465-PA 560 GG21465-PA 361..528 333..500 338 36.5 Plus
Dere\GG20836-PA 636 GG20836-PA 313..559 256..515 314 32.5 Plus
Dere\GG25148-PA 606 GG25148-PA 313..508 297..500 263 26.5 Plus
Dere\GG25148-PA 606 GG25148-PA 394..532 293..432 232 33.6 Plus
Dere\GG25148-PA 606 GG25148-PA 312..432 383..501 165 35.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:36:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18105-PA 918 GH18105-PA 1..918 11..869 3013 70.1 Plus
Dgri\GH10919-PA 579 GH10919-PA 287..507 269..491 370 34.1 Plus
Dgri\GH10979-PA 578 GH10979-PA 335..540 300..498 336 31.8 Plus
Dgri\GH10804-PA 902 GH10804-PA 290..471 299..481 334 34.4 Plus
Dgri\GH18613-PA 627 GH18613-PA 373..586 271..488 333 32 Plus
Dgri\GH18613-PA 627 GH18613-PA 319..550 271..515 322 33.3 Plus
Dgri\GH18613-PA 627 GH18613-PA 347..565 270..496 302 31 Plus
Dgri\GH10804-PA 902 GH10804-PA 290..424 358..490 277 36.3 Plus
Dgri\GH10804-PA 902 GH10804-PA 281..394 377..490 241 36.8 Plus
Dgri\GH10804-PA 902 GH10804-PA 346..487 299..469 226 26.6 Plus
Dgri\GH18613-PA 627 GH18613-PA 317..476 358..520 189 30.1 Plus
Dgri\GH10919-PA 579 GH10919-PA 284..404 383..501 158 35.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
wdn-PA 869 CG1454-PA 1..869 1..869 4540 100 Plus
Kr-h1-PA 791 CG45074-PA 217..586 299..682 405 26.5 Plus
Kr-h1-PB 845 CG45074-PB 271..640 299..682 405 26.5 Plus
CG15269-PA 587 CG15269-PA 325..518 299..491 389 35.7 Plus
CG12299-PA 736 CG12299-PA 101..702 111..739 388 24.2 Plus
CG6654-PA 639 CG6654-PA 383..608 269..498 375 30.7 Plus
Meics-PB 571 CG8474-PB 316..509 299..498 372 30.5 Plus
Meics-PA 583 CG8474-PA 328..521 299..498 372 30.5 Plus
CG6254-PA 634 CG6254-PA 364..556 301..493 368 37.9 Plus
crol-PH 686 CG14938-PH 240..655 269..655 365 27.1 Plus
crol-PB 891 CG14938-PB 445..860 269..655 365 27.1 Plus
Clamp-PA 561 CG1832-PA 196..523 157..498 364 26.9 Plus
CG5245-PA 501 CG5245-PA 187..396 293..513 363 33.5 Plus
sens-2-PB 746 CG31632-PB 275..709 89..534 363 26.6 Plus
sens-2-PA 746 CG31632-PA 275..709 89..534 363 26.6 Plus
CG6654-PA 639 CG6654-PA 235..562 165..515 362 29.2 Plus
CG15436-PA 346 CG15436-PA 123..316 296..497 362 33.5 Plus
Clamp-PB 566 CG1832-PB 196..528 157..498 354 26.8 Plus
CG15436-PA 346 CG15436-PA 107..346 244..494 353 28.2 Plus
CG7372-PA 971 CG7372-PA 629..957 299..627 352 25.7 Plus
Meics-PB 571 CG8474-PB 230..420 301..490 346 31.4 Plus
Meics-PA 583 CG8474-PA 242..432 301..490 346 31.4 Plus
Meics-PB 571 CG8474-PB 230..448 271..490 343 32.9 Plus
Meics-PA 583 CG8474-PA 242..460 271..490 343 32.9 Plus
cg-PC 629 CG8367-PC 137..395 299..578 343 32.5 Plus
cg-PA 671 CG8367-PA 179..437 299..578 343 32.5 Plus
cg-PD 671 CG8367-PD 179..437 299..578 343 32.5 Plus
cg-PF 770 CG8367-PF 272..530 299..578 343 32.5 Plus
cg-PB 772 CG8367-PB 280..538 299..578 343 32.5 Plus
cg-PJ 825 CG8367-PJ 280..538 299..578 343 32.5 Plus
cg-PL 837 CG8367-PL 292..550 299..578 343 32.5 Plus
CG2202-PA 889 CG2202-PA 530..855 269..562 343 28.8 Plus
cg-PI 773 CG8367-PI 280..510 299..544 342 34.1 Plus
cg-PM 780 CG8367-PM 287..517 299..544 342 34.1 Plus
cg-PK 665 CG8367-PK 171..402 299..544 339 34.1 Plus
cg-PN 686 CG8367-PN 186..417 299..544 339 34.1 Plus
CG17568-PA 513 CG17568-PA 36..508 38..521 333 24.2 Plus
dwg-PA 592 CG2711-PA 303..548 297..546 333 29 Plus
Meics-PB 571 CG8474-PB 274..475 289..489 332 32 Plus
Meics-PA 583 CG8474-PA 286..487 289..489 332 32 Plus
CG5245-PA 501 CG5245-PA 12..268 203..490 332 27.4 Plus
CG15436-PA 346 CG15436-PA 116..297 324..511 329 32.8 Plus
crol-PD 878 CG14938-PD 417..790 269..645 327 26.8 Plus
crol-PF 907 CG14938-PF 446..819 269..645 327 26.8 Plus
erm-PB 603 CG31670-PB 304..590 325..604 326 28.5 Plus
erm-PA 611 CG31670-PA 312..598 325..604 326 28.5 Plus
erm-PC 654 CG31670-PC 312..598 325..604 326 28.5 Plus
erm-PD 698 CG31670-PD 312..598 325..604 326 28.5 Plus
crol-PB 891 CG14938-PB 326..539 292..515 325 30.2 Plus
crol-PC 756 CG14938-PC 296..668 270..645 325 26.9 Plus
crol-PG 878 CG14938-PG 418..790 270..645 325 26.9 Plus
crol-PI 962 CG14938-PI 326..539 292..515 325 30.2 Plus
crol-PI 962 CG14938-PI 502..874 270..645 325 26.9 Plus
crol-PE 962 CG14938-PE 326..539 292..515 325 30.2 Plus
crol-PE 962 CG14938-PE 502..874 270..645 325 26.9 Plus
crol-PA 962 CG14938-PA 326..539 292..515 325 30.2 Plus
crol-PA 962 CG14938-PA 502..874 270..645 325 26.9 Plus
CG10543-PD 1631 CG10543-PD 742..1198 262..648 325 26.6 Plus
CG10543-PE 1634 CG10543-PE 745..1201 262..648 325 26.6 Plus
CG10543-PA 1634 CG10543-PA 745..1201 262..648 325 26.6 Plus
CG10543-PF 1635 CG10543-PF 745..1202 262..648 324 27.2 Plus
CG5245-PA 501 CG5245-PA 249..479 270..515 320 30.4 Plus
crol-PF 907 CG14938-PF 275..514 267..518 319 29.3 Plus
crol-PB 891 CG14938-PB 275..511 267..515 316 27.7 Plus
cg-PI 773 CG8367-PI 275..447 326..497 316 32.4 Plus
cg-PM 780 CG8367-PM 282..454 326..497 316 32.4 Plus
crol-PI 962 CG14938-PI 275..511 267..515 316 27.7 Plus
crol-PE 962 CG14938-PE 275..511 267..515 316 27.7 Plus
crol-PA 962 CG14938-PA 275..511 267..515 316 27.7 Plus
crol-PH 686 CG14938-PH 183..602 269..642 315 24.4 Plus
Kr-PB 502 CG3340-PB 95..386 233..533 315 27.5 Plus
Kr-PA 502 CG3340-PA 95..386 233..533 315 27.5 Plus
crol-PB 891 CG14938-PB 355..569 293..518 314 30.6 Plus
crol-PB 891 CG14938-PB 439..858 293..664 314 23.8 Plus
crol-PI 962 CG14938-PI 355..569 293..518 314 30.6 Plus
crol-PE 962 CG14938-PE 355..569 293..518 314 30.6 Plus
crol-PA 962 CG14938-PA 355..569 293..518 314 30.6 Plus
Meics-PB 571 CG8474-PB 316..565 269..490 311 27.3 Plus
Meics-PA 583 CG8474-PA 328..577 269..490 311 27.3 Plus
CG17385-PB 278 CG17385-PB 16..243 299..501 311 28.8 Plus
CG17385-PA 278 CG17385-PA 16..243 299..501 311 28.8 Plus
cg-PK 665 CG8367-PK 166..339 326..497 306 32.2 Plus
cg-PN 686 CG8367-PN 181..354 326..497 306 32.2 Plus
crol-PG 878 CG14938-PG 275..527 267..517 305 26.6 Plus
crol-PG 878 CG14938-PG 243..455 293..515 301 31.3 Plus
crol-PB 891 CG14938-PB 383..611 293..517 298 27 Plus
crol-PF 907 CG14938-PF 243..456 293..515 298 31.6 Plus
crol-PG 878 CG14938-PG 277..485 299..518 298 30 Plus
crol-PI 962 CG14938-PI 383..611 293..517 298 27 Plus
crol-PE 962 CG14938-PE 383..611 293..517 298 27 Plus
crol-PA 962 CG14938-PA 383..611 293..517 298 27 Plus
crol-PD 878 CG14938-PD 326..560 292..510 297 26.8 Plus
crol-PC 756 CG14938-PC 183..405 299..517 296 27.3 Plus
crol-PD 878 CG14938-PD 445..845 269..664 292 24.8 Plus
crol-PF 907 CG14938-PF 474..874 269..664 292 24.8 Plus
crol-PC 756 CG14938-PC 184..363 332..518 292 32.1 Plus
crol-PC 756 CG14938-PC 323..723 269..664 292 24.8 Plus
crol-PG 878 CG14938-PG 445..845 269..664 292 24.8 Plus
crol-PI 962 CG14938-PI 529..929 269..664 292 24.8 Plus
crol-PE 962 CG14938-PE 529..929 269..664 292 24.8 Plus
crol-PA 962 CG14938-PA 529..929 269..664 292 24.8 Plus
crol-PF 907 CG14938-PF 355..589 293..510 289 26.8 Plus
crol-PD 878 CG14938-PD 243..455 293..515 288 30 Plus
crol-PD 878 CG14938-PD 277..485 299..518 288 29.1 Plus
crol-PD 878 CG14938-PD 223..427 333..515 287 29.7 Plus
crol-PG 878 CG14938-PG 223..399 333..515 287 32.1 Plus
CG15269-PA 587 CG15269-PA 123..491 156..500 282 23.6 Plus
Meics-PB 571 CG8474-PB 344..567 269..464 277 29.1 Plus
Meics-PA 583 CG8474-PA 356..579 269..464 277 29.1 Plus
crol-PC 756 CG14938-PC 233..433 293..496 274 27.3 Plus
crol-PG 878 CG14938-PG 355..555 293..496 274 27.3 Plus
crol-PI 962 CG14938-PI 439..639 293..496 274 27.3 Plus
crol-PE 962 CG14938-PE 439..639 293..496 274 27.3 Plus
crol-PA 962 CG14938-PA 439..639 293..496 274 27.3 Plus
crol-PB 891 CG14938-PB 223..373 360..518 273 36 Plus
crol-PD 878 CG14938-PD 223..373 360..518 273 36 Plus
crol-PI 962 CG14938-PI 223..373 360..518 273 36 Plus
crol-PE 962 CG14938-PE 223..373 360..518 273 36 Plus
crol-PA 962 CG14938-PA 223..373 360..518 273 36 Plus
crol-PB 891 CG14938-PB 223..419 333..510 272 28.3 Plus
crol-PI 962 CG14938-PI 223..419 333..510 272 28.3 Plus
crol-PE 962 CG14938-PE 223..419 333..510 272 28.3 Plus
crol-PA 962 CG14938-PA 223..419 333..510 272 28.3 Plus
crol-PF 907 CG14938-PF 223..378 360..505 267 34.6 Plus
cg-PC 629 CG8367-PC 187..556 293..653 266 24.2 Plus
cg-PA 671 CG8367-PA 229..598 293..653 266 24.2 Plus
cg-PD 671 CG8367-PD 229..598 293..653 266 24.2 Plus
cg-PF 770 CG8367-PF 322..691 293..653 266 24.2 Plus
cg-PB 772 CG8367-PB 330..699 293..653 266 24.2 Plus
cg-PJ 825 CG8367-PJ 330..699 293..653 266 24.2 Plus
cg-PL 837 CG8367-PL 342..711 293..653 266 24.2 Plus
cg-PI 773 CG8367-PI 330..504 293..469 262 31.1 Plus
cg-PM 780 CG8367-PM 337..511 293..469 262 31.1 Plus
cg-PK 665 CG8367-PK 222..396 293..469 262 31.1 Plus
cg-PN 686 CG8367-PN 237..411 293..469 262 31.1 Plus
dwg-PA 592 CG2711-PA 271..525 224..494 256 24.7 Plus
Kr-h1-PA 791 CG45074-PA 90..347 236..521 252 25.8 Plus
Kr-h1-PB 845 CG45074-PB 144..401 236..521 252 25.8 Plus
CG15269-PA 587 CG15269-PA 377..515 293..432 243 33.6 Plus
CG2202-PA 889 CG2202-PA 475..756 300..510 241 26.9 Plus
CG6254-PA 634 CG6254-PA 313..606 283..572 234 24 Plus
sens-2-PB 746 CG31632-PB 500..719 379..564 232 27.7 Plus
sens-2-PA 746 CG31632-PA 500..719 379..564 232 27.7 Plus
dwg-PA 592 CG2711-PA 361..537 269..450 228 29.5 Plus
CG7372-PA 971 CG7372-PA 679..818 293..439 226 30.4 Plus
CG6254-PA 634 CG6254-PA 404..551 281..460 222 25.6 Plus
crol-PC 756 CG14938-PC 178..305 381..515 217 31.2 Plus
crol-PH 686 CG14938-PH 178..306 381..515 206 30.9 Plus
CG10543-PF 1635 CG10543-PF 724..1064 298..638 205 20.9 Plus
CG2202-PA 889 CG2202-PA 454..648 338..493 202 25.9 Plus
CG10543-PD 1631 CG10543-PD 721..915 298..493 199 23.9 Plus
CG10543-PE 1634 CG10543-PE 724..918 298..493 199 23.9 Plus
CG10543-PA 1634 CG10543-PA 724..918 298..493 199 23.9 Plus
CG15269-PA 587 CG15269-PA 293..415 381..501 175 34.7 Plus
cg-PC 629 CG8367-PC 119..213 396..490 167 34.7 Plus
cg-PA 671 CG8367-PA 161..255 396..490 167 34.7 Plus
cg-PD 671 CG8367-PD 161..255 396..490 167 34.7 Plus
cg-PF 770 CG8367-PF 254..348 396..490 167 34.7 Plus
cg-PB 772 CG8367-PB 262..356 396..490 167 34.7 Plus
cg-PJ 825 CG8367-PJ 262..356 396..490 167 34.7 Plus
cg-PL 837 CG8367-PL 274..368 396..490 167 34.7 Plus
cg-PI 773 CG8367-PI 262..356 396..490 167 34.7 Plus
cg-PM 780 CG8367-PM 269..363 396..490 167 34.7 Plus
Meics-PB 571 CG8474-PB 219..315 405..500 165 35 Plus
Meics-PA 583 CG8474-PA 231..327 405..500 165 35 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:36:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10527-PA 897 GI10527-PA 1..897 11..869 2973 69.1 Plus
Dmoj\GI13302-PA 606 GI13302-PA 309..529 269..491 372 34.1 Plus
Dmoj\GI22252-PA 572 GI22252-PA 243..492 239..493 340 32.7 Plus
Dmoj\GI17493-PA 576 GI17493-PA 377..538 333..498 335 34.7 Plus
Dmoj\GI10361-PA 595 GI10361-PA 340..553 271..488 325 31.1 Plus
Dmoj\GI10361-PA 595 GI10361-PA 286..517 271..515 308 32.5 Plus
Dmoj\GI10361-PA 595 GI10361-PA 283..416 357..491 194 34.1 Plus
Dmoj\GI13302-PA 606 GI13302-PA 306..426 383..501 160 35.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:36:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13688-PA 870 GL13688-PA 1..870 11..869 3533 81.4 Plus
Dper\GL26031-PA 597 GL26031-PA 341..534 299..491 377 36.2 Plus
Dper\GL19065-PA 851 GL19065-PA 215..529 237..581 341 28.7 Plus
Dper\GL26169-PA 557 GL26169-PA 358..519 333..498 338 34.7 Plus
Dper\GL23841-PA 564 GL23841-PA 249..494 261..493 328 34 Plus
Dper\GL26031-PA 597 GL26031-PA 312..507 297..500 262 26.5 Plus
Dper\GL26031-PA 597 GL26031-PA 393..531 293..432 230 33.6 Plus
Dper\GL26169-PA 557 GL26169-PA 384..518 269..408 224 36.1 Plus
Dper\GL26169-PA 557 GL26169-PA 351..518 264..436 218 30.5 Plus
Dper\GL26031-PA 597 GL26031-PA 309..431 381..501 163 34.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:36:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13064-PA 871 GA13064-PA 1..871 11..869 3494 80.8 Plus
Dpse\GA13615-PA 599 GA13615-PA 343..536 299..491 377 36.2 Plus
Dpse\GA14887-PA 557 GA14887-PA 358..519 333..498 338 34.7 Plus
Dpse\GA15080-PA 848 GA15080-PA 216..451 237..481 338 31.6 Plus
Dpse\GA19755-PA 607 GA19755-PA 352..565 271..488 329 31.5 Plus
Dpse\GA19755-PA 607 GA19755-PA 327..544 271..496 302 31.1 Plus
Dpse\GA13615-PA 599 GA13615-PA 314..509 297..500 262 26.5 Plus
Dpse\GA15080-PA 848 GA15080-PA 261..374 377..490 243 36.8 Plus
Dpse\GA13615-PA 599 GA13615-PA 395..533 293..432 230 33.6 Plus
Dpse\GA14887-PA 557 GA14887-PA 384..518 269..408 224 36.1 Plus
Dpse\GA14887-PA 557 GA14887-PA 351..518 264..436 218 30.5 Plus
Dpse\GA19755-PA 607 GA19755-PA 295..429 357..497 213 36.1 Plus
Dpse\GA13615-PA 599 GA13615-PA 311..433 381..501 162 34.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:36:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12283-PA 869 GM12283-PA 1..869 1..869 4592 98.8 Plus
Dsec\GM15938-PA 643 GM15938-PA 381..574 299..491 374 35.7 Plus
Dsec\GM26181-PA 586 GM26181-PA 316..559 301..573 345 33.1 Plus
Dsec\GM25799-PA 639 GM25799-PA 383..598 269..488 341 31.7 Plus
Dsec\GM16114-PA 561 GM16114-PA 318..523 270..498 339 31.5 Plus
Dsec\GM15938-PA 643 GM15938-PA 352..547 297..500 262 26.5 Plus
Dsec\GM25799-PA 639 GM25799-PA 343..562 344..515 230 29.1 Plus
Dsec\GM15938-PA 643 GM15938-PA 433..571 293..432 229 33.6 Plus
Dsec\GM25799-PA 639 GM25799-PA 328..462 357..497 192 34 Plus
Dsec\GM15938-PA 643 GM15938-PA 351..471 383..501 164 35.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18017-PA 840 GD18017-PA 1..840 1..869 4037 95.6 Plus
Dsim\GD23994-PA 592 GD23994-PA 330..523 299..491 375 35.7 Plus
Dsim\GD20376-PA 639 GD20376-PA 383..598 269..488 342 31.7 Plus
Dsim\GD14561-PA 976 GD14561-PA 634..828 299..496 335 31.2 Plus
Dsim\GD12643-PA 575 GD12643-PA 320..514 299..499 330 31.4 Plus
Dsim\GD20376-PA 639 GD20376-PA 325..562 265..515 318 32.3 Plus
Dsim\GD12643-PA 575 GD12643-PA 234..424 301..490 305 31.4 Plus
Dsim\GD12643-PA 575 GD12643-PA 234..452 271..490 295 33 Plus
Dsim\GD12643-PA 575 GD12643-PA 278..479 289..489 289 32 Plus
Dsim\GD23994-PA 592 GD23994-PA 301..496 297..500 261 26.5 Plus
Dsim\GD23994-PA 592 GD23994-PA 382..520 293..432 229 33.6 Plus
Dsim\GD12643-PA 575 GD12643-PA 348..572 269..465 226 29.2 Plus
Dsim\GD14561-PA 976 GD14561-PA 684..823 293..439 214 30.4 Plus
Dsim\GD23994-PA 592 GD23994-PA 300..420 383..501 165 35.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:36:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24179-PA 872 GJ24179-PA 1..872 11..869 3068 72.5 Plus
Dvir\GJ11932-PA 596 GJ11932-PA 334..527 299..491 365 36.2 Plus
Dvir\GJ15143-PA 584 GJ15143-PA 340..546 300..498 337 31.2 Plus
Dvir\GJ10213-PA 615 GJ10213-PA 362..575 271..488 336 32 Plus
Dvir\GJ20060-PA 838 GJ20060-PA 291..521 299..544 330 34 Plus
Dvir\GJ10213-PA 615 GJ10213-PA 304..539 266..515 320 33.1 Plus
Dvir\GJ11932-PA 596 GJ11932-PA 302..424 381..501 156 34.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:36:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10984-PA 855 GK10984-PA 8..855 28..869 2810 70.2 Plus
Dwil\GK18315-PA 593 GK18315-PA 311..531 269..491 379 34.1 Plus
Dwil\GK15349-PA 566 GK15349-PA 367..528 333..498 337 34.7 Plus
Dwil\GK21553-PA 833 GK21553-PA 279..509 299..544 329 34.4 Plus
Dwil\GK24242-PA 742 GK24242-PA 468..652 317..493 319 33 Plus
Dwil\GK18315-PA 593 GK18315-PA 298..504 318..500 265 29 Plus
Dwil\GK24242-PA 742 GK24242-PA 487..647 268..432 242 31.3 Plus
Dwil\GK18315-PA 593 GK18315-PA 290..416 365..490 166 32.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:36:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\wdn-PA 869 GE10494-PA 1..869 1..869 4505 96.9 Plus
Dyak\GE20880-PA 596 GE20880-PA 333..526 299..491 372 35.7 Plus
Dyak\GE24700-PA 631 GE24700-PA 361..553 301..493 369 39.8 Plus
Dyak\GE17974-PA 438 GE17974-PA 176..360 294..481 363 38.1 Plus
Dyak\GE20043-PA 573 GE20043-PA 319..498 299..479 340 33.2 Plus
Dyak\GE20043-PA 573 GE20043-PA 203..451 240..490 297 31.8 Plus
Dyak\GE17974-PA 438 GE17974-PA 209..430 299..495 271 30.1 Plus
Dyak\GE20880-PA 596 GE20880-PA 304..499 297..500 259 26.5 Plus
Dyak\GE20043-PA 573 GE20043-PA 347..571 269..465 229 30.1 Plus
Dyak\GE20880-PA 596 GE20880-PA 385..523 293..432 227 33.6 Plus
Dyak\GE20880-PA 596 GE20880-PA 303..423 383..501 163 35.2 Plus

LD40824.hyp Sequence

Translation from 227 to 2836

> LD40824.hyp
MEGGKGEGKRMKEEAPSKKLPPKIYGGDAGTPTKAAHDEILSSLLRINNF
DSISSIKDESLDIDLSACVTISSASLVNGNSLSSTDFWRVLDESAQNNTE
LNLSSDVCRDDLAATSSSTVPSTLTSDNHSSSEFSVTFLRPEPPNAFTNS
PFKKTSSSGTSTPVKLSPEQLHQQHQLQMPQSQLLQRKPKLPAATAVRLK
VFKEEPPEEKHPPEQVVTKVEVCESELLPPSFTIFQQAKSAESVADAASM
PPPAASETKPLEVDPAPLHKCLDCNGLLLETPDEVAKHEAAAHRLRLTYR
CSECQREFELLAGLKKHLKTHRTEGRKDTWKKCPDCGKCLKLGSMWMHRK
IHSDNKKYQCDICGQKFVQKINLTHHARIHSSEKPYECPECQKRFQERSH
LQRHQKYHAQTRSYRCEKCGKMYKTERCLKVHNLVHLEQRPFACTVCDKS
FISNSKLKQHSNIHTGMRPFKCNYCPRDFTNFPNWLKHTRRRHKVDHKTG
EHLENIPSYCSKKSTTNKAQKAAAAAAAAAAASSAVNPNELSASSELKAK
ANLTSTAAPAPAKQARKKKQPQQATLAALGITLPAGTALQQVHPVPLAQQ
HQQELTTVLVPLAPPAPKQTKAKRERKQLAPKQLQQKPQLLQQGQPQQSS
LEPIPAVPQIKKEPVQTQGPFLDLHGLSLTSAEELIMEQALEMEECGLYD
APNANTEMGTSDNAISDSAAALHFQIKNELPDELLPDDDFLPCKPSDRLP
CPSLESSPFSSPASMELTAVSCASSVAISTNALPVRSGNYYLPAFTLNAH
GKLSSTGNGVQSVTTSLAQTPSVSMVNVPLLVRSNQMLPSVDTLLFTNQT
GGSRFFAGKSATAATPHLT*

LD40824.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:40:08
Subject Length Description Subject Range Query Range Score Percent Strand
wdn-PA 869 CG1454-PA 1..869 1..869 4540 100 Plus
Kr-h1-PA 791 CG45074-PA 217..586 299..682 405 26.5 Plus
Kr-h1-PB 845 CG45074-PB 271..640 299..682 405 26.5 Plus
CG15269-PA 587 CG15269-PA 325..518 299..491 389 35.7 Plus
CG12299-PA 736 CG12299-PA 101..702 111..739 388 24.2 Plus
CG15269-PA 587 CG15269-PA 123..491 156..500 282 23.6 Plus
Kr-h1-PA 791 CG45074-PA 90..347 236..521 252 25.8 Plus
Kr-h1-PB 845 CG45074-PB 144..401 236..521 252 25.8 Plus
CG15269-PA 587 CG15269-PA 377..515 293..432 243 33.6 Plus
CG15269-PA 587 CG15269-PA 293..415 381..501 175 34.7 Plus