BDGP Sequence Production Resources |
Search the DGRC for LD40940
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 409 |
Well: | 40 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3165-RA |
Protein status: | LD40940.pep: gold |
Preliminary Size: | 1148 |
Sequenced Size: | 1337 |
Gene | Date | Evidence |
---|---|---|
CG3165 | 2001-01-01 | Release 2 assignment |
CG3165 | 2001-12-12 | Blastp of sequenced clone |
CG3165 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3165 | 2008-04-29 | Release 5.5 accounting |
CG3165 | 2008-08-15 | Release 5.9 accounting |
CG3165 | 2008-12-18 | 5.12 accounting |
1337 bp (1337 high quality bases) assembled on 2001-12-12
GenBank Submission: AY070563
> LD40940.complete AGAACTCCGTGTTGGTCCTCAAACATTTTGAATAAAACGAAATATATGTA CATACTATGTACATGCACTTTTAGCCACCAGTTGCGCTCTTAATGGCTCC GAACGATGCAGTTGCGGAGCACGCGGAGGAGCAGCCAAAGATTTCCACAT TTGCCGTTCTGGACCTAGAGACCACCAACTTGCCTGCCTACAGGAACAAC CGAGTGAGCATTACGGAGTTGTGCATTTACGCCTTTGAAGCCGCGCTCCT TAAGAAGAAAAAGAAGGAGCAGGACCAGGATGAGCAGCAGGAGCTGCCAG CGGCACCGCGGGTGCTGCACAAATTGAATGTGCTCTTCCAGCCGTCCATG GTAGTGGACCCGGAAGCGGAGAGAATAACAGGTCTGAGCAACTACTTGCT GGAGCGGGAGTCCCAGCTAGACACGGATGCCGCGCAACTCATCGTCAGTT TTCTAAAGCACTTGCCGAGTCCGGTTTGCCTGGTGGCTCACAATGGTTGG GGCTTCGATTTTCCCATTCTGAGGCAGGCATTTGAGAAACTAAACATAGA GCTTCCCCAATCCCTGACTTGTGTTGACTCACTGCGCGCCTTCATGGAGA TTGACGACACACAACAAAAAGAAACCAGTCAGTTGAAAGTACCCAACGAT GTGCAGGAAATCATTCCGGAGCTGAAACCCAAACAGAATACTGAAACTTG CCTCAAGGAGCCAGAAGCGGTCGTGAACATCGATTGGCGAACCAGAAACG AAACCACTCCAAATCGTCCAATTTTAAAGCCTACAGAGGCATTCGCCAAG CGTAAGTTATTACGCGACGGCGATGAGGATGACTTGGAGGAGCAGACCCC TCCCAAGCGGAAACCCGATGAGTTTAGGTCACGACGCCAGCTGTTCAGTG GATGCAAGTGTGCCGAGAACAAACGCTATCCCCCCCGCGGAGTTTATAAT TTGGAAAGTCTCTACACGAGAATATTTAAGATACCAGCACTTAGTGCTCA CCAGGCAGAGGCTGATGTAGTCATGACCACAAAACTGATACAGCATTACG GCATTGATTTCCTGGCCTTCGCCGAGGAGCAGGCCATTCCATTCCAGCAA GTGGTGCCACTTGGCTCTCCTGTTTGTCGAAAAAAGAGCGCAATCTAACA AATTCTATTCCAGCATGAACTTCATTTTAAAATGTAATGGATTATTATAT TTTTTATAATGTAGGATTTTAATAATTGATTTTTAATGTGTTATTATAAA TATTTTTATAATAAGTATATTTGTATAAAAGTGTCCAGTCCAACCAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3165-RA | 1465 | CG3165-RA | 138..1433 | 1..1296 | 6480 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G2 | 3102 | G2 G2 3102bp | 390..468 | 61..137 | 128 | 67.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2976786..2977166 | 1..381 | 100 | -> | Plus |
chr2L | 2977223..2978136 | 382..1295 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3165-RA | 1..1056 | 93..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3165-RA | 1..1056 | 93..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3165-RA | 1..1056 | 93..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3165-RA | 1..1056 | 93..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3165-RA | 1..1056 | 93..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3165-RA | 24..1318 | 1..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3165-RA | 24..1318 | 1..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3165-RA | 29..1323 | 1..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3165-RA | 24..1318 | 1..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3165-RA | 29..1323 | 1..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2977150..2977530 | 1..381 | 100 | -> | Plus |
2L | 2977587..2978500 | 382..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2977150..2977530 | 1..381 | 100 | -> | Plus |
2L | 2977587..2978500 | 382..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2977150..2977530 | 1..381 | 100 | -> | Plus |
2L | 2977587..2978500 | 382..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2977150..2977530 | 1..381 | 100 | -> | Plus |
arm_2L | 2977587..2978500 | 382..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2977150..2977530 | 1..381 | 100 | -> | Plus |
2L | 2977587..2978500 | 382..1295 | 100 | Plus |
Translation from 92 to 1147
> LD40940.pep MAPNDAVAEHAEEQPKISTFAVLDLETTNLPAYRNNRVSITELCIYAFEA ALLKKKKKEQDQDEQQELPAAPRVLHKLNVLFQPSMVVDPEAERITGLSN YLLERESQLDTDAAQLIVSFLKHLPSPVCLVAHNGWGFDFPILRQAFEKL NIELPQSLTCVDSLRAFMEIDDTQQKETSQLKVPNDVQEIIPELKPKQNT ETCLKEPEAVVNIDWRTRNETTPNRPILKPTEAFAKRKLLRDGDEDDLEE QTPPKRKPDEFRSRRQLFSGCKCAENKRYPPRGVYNLESLYTRIFKIPAL SAHQAEADVVMTTKLIQHYGIDFLAFAEEQAIPFQQVVPLGSPVCRKKSA I*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14994-PA | 362 | GF14994-PA | 1..359 | 1..343 | 973 | 55 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24904-PA | 348 | GG24904-PA | 1..347 | 1..347 | 1438 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11086-PA | 343 | GH11086-PA | 1..339 | 1..342 | 931 | 54.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3165-PB | 351 | CG3165-PB | 1..351 | 1..351 | 1818 | 100 | Plus |
CG3165-PA | 351 | CG3165-PA | 1..351 | 1..351 | 1818 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17603-PA | 348 | GI17603-PA | 1..341 | 1..342 | 956 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26302-PA | 335 | GL26302-PA | 1..335 | 1..347 | 1052 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16366-PA | 335 | GA16366-PA | 1..335 | 1..347 | 1050 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18382-PA | 353 | GM18382-PA | 1..353 | 1..351 | 1725 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23197-PA | 353 | GD23197-PA | 1..353 | 1..351 | 1711 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17948-PA | 344 | GJ17948-PA | 1..339 | 1..342 | 967 | 58.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24851-PA | 367 | GK24851-PA | 1..359 | 1..343 | 958 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18196-PA | 361 | GE18196-PA | 1..351 | 1..348 | 1501 | 82.9 | Plus |
Translation from 92 to 1147
> LD40940.hyp MAPNDAVAEHAEEQPKISTFAVLDLETTNLPAYRNNRVSITELCIYAFEA ALLKKKKKEQDQDEQQELPAAPRVLHKLNVLFQPSMVVDPEAERITGLSN YLLERESQLDTDAAQLIVSFLKHLPSPVCLVAHNGWGFDFPILRQAFEKL NIELPQSLTCVDSLRAFMEIDDTQQKETSQLKVPNDVQEIIPELKPKQNT ETCLKEPEAVVNIDWRTRNETTPNRPILKPTEAFAKRKLLRDGDEDDLEE QTPPKRKPDEFRSRRQLFSGCKCAENKRYPPRGVYNLESLYTRIFKIPAL SAHQAEADVVMTTKLIQHYGIDFLAFAEEQAIPFQQVVPLGSPVCRKKSA I*