BDGP Sequence Production Resources |
Search the DGRC for LD40966
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 409 |
Well: | 66 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11851-RA |
Protein status: | LD40966.pep: gold |
Preliminary Size: | 2243 |
Sequenced Size: | 2327 |
Gene | Date | Evidence |
---|---|---|
CG11851 | 2001-01-01 | Release 2 assignment |
CG11851 | 2001-11-29 | Blastp of sequenced clone |
CG11851 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11851 | 2008-04-29 | Release 5.5 accounting |
CG11851 | 2008-08-15 | Release 5.9 accounting |
CG11851 | 2008-12-18 | 5.12 accounting |
2327 bp (2327 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069643
> LD40966.complete ATACTTTGCAACTTTTCCGCCGGTAATTTTCTCAGAAAGTCCGGATTATG GCGCCTCCGGCTGCTCGCGCTCGCTACATAGCCAACAAGGCGGACAACCA GATTCTCTCAAAGAAACCGCCCAAAAGACCGGGCCTAAATGGCAACAACA AGACGAAGGAAGCCACACCGGCCGGCAAAAAAAAGGATAAGGATGCTAAA AAGCGCAACCAACCCACAAGTGGTGGTCAAGAGAAGGGGCTTCCCAACCC CATAATGCCCAGTGTTCAGACCGCCTTCAAGACCTTCGTGAGCGCCCGGT TGTGCAGCGCCATTTGGGCGTACATAGCCGACTGCGACGAGACGTTCAAC TACTGGGAGCCGCTGCACTACATCATTAATGGCCATGGACTCCAGACGTG GGAGTACAGCCCGCAGTTTGGACTCCGATCGTACACCTACCTATTGCTGC AGGGCGTGCCCGGATACTTTTACCAAAAGTTGTTCAATCCCAGTCCCATA CTCATCTTCTACATGGTGCGATGTATGTTGGGTTTCGGTTGTGCCGTAAT GGAGCGATATATGTACAAGTCGATTTGTCAAGAGTTTGGAATTCACATCG GTCGTCTGTGGCTGATATTCCAGCTCTTCAGTGTGGGCATGTTTGTGTCT AGCACCGCTCTACTGCCATCCTCCTTTTCCATGTACTTTGGCTGTGCTGC CCTGGCCGCGTGGTGGCAACAAAATTACTGTTTTGCCATATTCCTGACAG CAATATCCGCTTTGCTTGGTTGGCCATTTGCTGCGCTTATTGGCATACCG CTGGTGCTGGAGATGCTTTTAAGGCAGCGTGATTGGAAGACCTTTGTTCA GTGGACACTGATATCGGGCGCCACGGTTGCCATTCCCATGATTGCAATTG ATACCAGCTATTTTGGCAAACTGACATTTGCTCCTCTAAATATTGTTTGG TACAATGTGTTCACCAGTCACGGACCAAACATATTTGGTACGGAACCACT CAGTTACTACATTATCAATGGTTTCCTTAACTTTAATATTATTTGGCTCC TGGCACTTCAACTACCCATAATGCTGGTCATAGACTATTTGATTGTGCCA GCCAAATCAAAGTCGACGTTAAATTTCCCCCACTACATCTCGCTGGCTCC CCTGTACCTGTGGCTTCTCGTCTTTTTTGCCCAACCGCACAAGGAAGAGC GCTTTCTGTTTCCCATATATCCTTTAATCTCGCTTTGCGGAGCCATCACT GTGGATGTGTATCAGCGCATATTCTTCCGTATGAAATCGGTGGTCTTCAA AATTAAGGCGGGAGTTCATTATCTGGACCACAGCATGTTTATTGCCATCT TGGTAATGGTGACCAGCACATTGTTGGGACTTTCCAGGGTGTTTGCCCTG TATAGGAACTACCATGCTCCGATGGATTTGATGCTGGAACTGAACCAGTT TAAGGCGACACCGCAGTACGACCCGGATGTAATATACAACGTGTGTATTG GCAAAGATTGGCATCGATATCCGGGCAGCTTCTTCTTTCCCGCCAAAAAC TTCCGGCTGCGTTTTCTGAAATCCGAATTCCGAGGCATGCTGCCCGCGTA CTATGACGAAGGTCAAAATGCTACTAAGGTAGTGCAACCGTATTTTAACG ATCTCAACCAGGAAAATGAGCACATGTACTTTGACTACGACCGTTGCGAT TTCCTCGTCGACTTTGATGAAGGCAAGTATACGGCTCTGGAACCCAATTA TTCAAAACGATCCAAAGATTGGTCGGTGATGAAGAGTCTGCCCTTCCTCA TTCCGGAGAAGTCGCACAAAGTGTTACGTGCCTTCTATGTGCCATTCCTG ACCGACAATCACATTCAGTACGGAGACTTTAATCTGCTCAAGCGAAAGAC GAAACGAAATGGCAGGTAAAGGCAGGCCCAGATAGAAAGAGTCTGGATTC ATGCCACAAAAACTCCAATGCATATGGGGTGGCTCTCTTATTCTTTCAAA ACAAAAAAAACGCATTAATCTTAAAGTAATGCCAAGCAAATATGCTTAAG AAACTATAGCTTCAATTCATATTGAATTTATAGTGATTTCCAAGTATCTT ACACCCCTGAGAGCCTCTGTCTGTATTCCAAATAATCTTTCGTACCCAGC ATTGAATTTGTAATATCCTAATATCTGTTCTAAGTCAGTGAAGCGTTTTT AATTCACGTTATTTTCGTTTTGTCCATGCCAAAGTTGTGAAGATCACCAG AATCGAAGTAGAACATAAGCGTCAAGAATATAAACAACGAGATTCGTAAA AAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11851-RA | 2511 | CG11851-RA | 148..2445 | 1..2298 | 11490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 21045948..21047199 | 1046..2297 | 6200 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 21045416..21045893 | 569..1046 | 2360 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 21044998..21045363 | 205..570 | 1830 | 100 | Plus |
chr3R | 27901430 | chr3R | 21044736..21044940 | 1..205 | 1010 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 25222867..25224119 | 1046..2298 | 6265 | 100 | Plus |
3R | 32079331 | 3R | 25222335..25222812 | 569..1046 | 2390 | 100 | Plus |
3R | 32079331 | 3R | 25221917..25222282 | 205..570 | 1830 | 100 | Plus |
3R | 32079331 | 3R | 25221655..25221859 | 1..205 | 1025 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24963698..24964950 | 1046..2298 | 6265 | 100 | Plus |
3R | 31820162 | 3R | 24963166..24963643 | 569..1046 | 2390 | 100 | Plus |
3R | 31820162 | 3R | 24962748..24963113 | 205..570 | 1830 | 100 | Plus |
3R | 31820162 | 3R | 24962486..24962690 | 1..205 | 1025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21044736..21044940 | 1..205 | 99 | -> | Plus |
chr3R | 21044999..21045361 | 206..568 | 100 | -> | Plus |
chr3R | 21045416..21045893 | 569..1046 | 99 | -> | Plus |
chr3R | 21045949..21047199 | 1047..2297 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11851-RA | 1..1872 | 48..1919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11851-RA | 1..1872 | 48..1919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11851-RA | 1..1872 | 48..1919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11851-RA | 1..1872 | 48..1919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11851-RA | 1..1872 | 48..1919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11851-RA | 63..2359 | 1..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11851-RA | 63..2359 | 1..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11851-RA | 67..2363 | 1..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11851-RA | 63..2359 | 1..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11851-RA | 67..2363 | 1..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25221655..25221859 | 1..205 | 100 | -> | Plus |
3R | 25221918..25222280 | 206..568 | 100 | -> | Plus |
3R | 25222335..25222812 | 569..1046 | 100 | -> | Plus |
3R | 25222868..25224118 | 1047..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25221655..25221859 | 1..205 | 100 | -> | Plus |
3R | 25221918..25222280 | 206..568 | 100 | -> | Plus |
3R | 25222335..25222812 | 569..1046 | 100 | -> | Plus |
3R | 25222868..25224118 | 1047..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25221655..25221859 | 1..205 | 100 | -> | Plus |
3R | 25221918..25222280 | 206..568 | 100 | -> | Plus |
3R | 25222335..25222812 | 569..1046 | 100 | -> | Plus |
3R | 25222868..25224118 | 1047..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21047377..21047581 | 1..205 | 100 | -> | Plus |
arm_3R | 21047640..21048002 | 206..568 | 100 | -> | Plus |
arm_3R | 21048057..21048534 | 569..1046 | 100 | -> | Plus |
arm_3R | 21048590..21049840 | 1047..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24962749..24963111 | 206..568 | 100 | -> | Plus |
3R | 24963166..24963643 | 569..1046 | 100 | -> | Plus |
3R | 24963699..24964949 | 1047..2297 | 100 | Plus | |
3R | 24962486..24962690 | 1..205 | 100 | -> | Plus |
Translation from 47 to 1918
> LD40966.pep MAPPAARARYIANKADNQILSKKPPKRPGLNGNNKTKEATPAGKKKDKDA KKRNQPTSGGQEKGLPNPIMPSVQTAFKTFVSARLCSAIWAYIADCDETF NYWEPLHYIINGHGLQTWEYSPQFGLRSYTYLLLQGVPGYFYQKLFNPSP ILIFYMVRCMLGFGCAVMERYMYKSICQEFGIHIGRLWLIFQLFSVGMFV SSTALLPSSFSMYFGCAALAAWWQQNYCFAIFLTAISALLGWPFAALIGI PLVLEMLLRQRDWKTFVQWTLISGATVAIPMIAIDTSYFGKLTFAPLNIV WYNVFTSHGPNIFGTEPLSYYIINGFLNFNIIWLLALQLPIMLVIDYLIV PAKSKSTLNFPHYISLAPLYLWLLVFFAQPHKEERFLFPIYPLISLCGAI TVDVYQRIFFRMKSVVFKIKAGVHYLDHSMFIAILVMVTSTLLGLSRVFA LYRNYHAPMDLMLELNQFKATPQYDPDVIYNVCIGKDWHRYPGSFFFPAK NFRLRFLKSEFRGMLPAYYDEGQNATKVVQPYFNDLNQENEHMYFDYDRC DFLVDFDEGKYTALEPNYSKRSKDWSVMKSLPFLIPEKSHKVLRAFYVPF LTDNHIQYGDFNLLKRKTKRNGR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17550-PA | 619 | GF17550-PA | 1..619 | 1..623 | 2975 | 89.9 | Plus |
Dana\GF18995-PA | 486 | GF18995-PA | 1..372 | 1..410 | 1666 | 79.1 | Plus |
Dana\GF18995-PA | 486 | GF18995-PA | 371..486 | 496..606 | 524 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11376-PA | 623 | GG11376-PA | 1..623 | 1..623 | 3306 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17379-PA | 625 | GH17379-PA | 1..624 | 1..622 | 2907 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11851-PA | 623 | CG11851-PA | 1..623 | 1..623 | 3351 | 100 | Plus |
PIG-B-PB | 531 | CG12006-PB | 30..329 | 102..416 | 164 | 26.4 | Plus |
PIG-B-PA | 561 | CG12006-PA | 30..329 | 102..416 | 164 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23923-PA | 622 | GI23923-PA | 1..620 | 1..621 | 2877 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11986-PA | 623 | GL11986-PA | 1..623 | 1..623 | 3004 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11235-PA | 623 | GA11235-PA | 1..623 | 1..623 | 2999 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17819-PA | 623 | GM17819-PA | 1..623 | 1..623 | 3310 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21188-PA | 623 | GD21188-PA | 1..623 | 1..623 | 3321 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24015-PA | 624 | GJ24015-PA | 1..623 | 1..622 | 2902 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13449-PA | 622 | GK13449-PA | 1..619 | 1..622 | 2888 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23573-PA | 623 | GE23573-PA | 1..623 | 1..623 | 3298 | 98.1 | Plus |
Translation from 47 to 1918
> LD40966.hyp MAPPAARARYIANKADNQILSKKPPKRPGLNGNNKTKEATPAGKKKDKDA KKRNQPTSGGQEKGLPNPIMPSVQTAFKTFVSARLCSAIWAYIADCDETF NYWEPLHYIINGHGLQTWEYSPQFGLRSYTYLLLQGVPGYFYQKLFNPSP ILIFYMVRCMLGFGCAVMERYMYKSICQEFGIHIGRLWLIFQLFSVGMFV SSTALLPSSFSMYFGCAALAAWWQQNYCFAIFLTAISALLGWPFAALIGI PLVLEMLLRQRDWKTFVQWTLISGATVAIPMIAIDTSYFGKLTFAPLNIV WYNVFTSHGPNIFGTEPLSYYIINGFLNFNIIWLLALQLPIMLVIDYLIV PAKSKSTLNFPHYISLAPLYLWLLVFFAQPHKEERFLFPIYPLISLCGAI TVDVYQRIFFRMKSVVFKIKAGVHYLDHSMFIAILVMVTSTLLGLSRVFA LYRNYHAPMDLMLELNQFKATPQYDPDVIYNVCIGKDWHRYPGSFFFPAK NFRLRFLKSEFRGMLPAYYDEGQNATKVVQPYFNDLNQENEHMYFDYDRC DFLVDFDEGKYTALEPNYSKRSKDWSVMKSLPFLIPEKSHKVLRAFYVPF LTDNHIQYGDFNLLKRKTKRNGR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11851-PA | 623 | CG11851-PA | 1..623 | 1..623 | 3351 | 100 | Plus |
CG12006-PB | 531 | CG12006-PB | 30..329 | 102..416 | 164 | 26.4 | Plus |
CG12006-PA | 561 | CG12006-PA | 30..329 | 102..416 | 164 | 26.4 | Plus |