BDGP Sequence Production Resources |
Search the DGRC for LD40977
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 409 |
Well: | 77 |
Vector: | pOT2 |
Associated Gene/Transcript | Yippee-RB |
Protein status: | LD40977.pep: gold |
Preliminary Size: | 1363 |
Sequenced Size: | 1275 |
Gene | Date | Evidence |
---|---|---|
CG1989 | 2001-01-01 | Release 2 assignment |
CG1989 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1989 | 2003-01-15 | Blastp of sequenced clone |
Yippee | 2008-04-29 | Release 5.5 accounting |
Yippee | 2008-08-15 | Release 5.9 accounting |
Yippee | 2008-12-18 | 5.12 accounting |
1275 bp (1275 high quality bases) assembled on 2003-01-15
GenBank Submission: AY118569
> LD40977.complete ATTCCACAGTGTTTTGTTGTTTTTTTGTGCAAGCGACGCATTAACCGTGT TCTATATACAAATCGGGCATATATATTTATATATATCTACCATATCGGAT TGCAAAGACCCCAAAGCTCAAGGAAAATCCCCTGACACCGGACACCTGAC CAGGATTCCCCAAGTGGAGTCATCTTCAAACAGCTGTGAAAAAGGAACAA AGGAGGAGCACAACAAACACACGCATACACACGTACGTACTCGGGAGAGC GAGCGAGACGGGGTGCGACCAGAAGAGCGAGTGAGGTAGAGGAGGGAGCA CAATGGGACGCATTTTCTTGGAACATCTTGGGGGTCTGAAACTCTTCAAT TGCGCCCAATGCCACACGAACCTGACCAACCGCAGTCAATTGATCAGTAC CCGATTCACAGGCGCAACAGGACGCGCCTATCTGTTTAAGCGTGTGGTCA ACCTGACCTTCAGCAACATCCAGGAACGGGTCATGCTCACGGGTCGCCAC ATGGTGCGCGACGTTATGTGCAAGAATTGTGGAGCCAAACTTGGCTGGAT GTACGAGTTCGCCACCGAAGAGTCACAAAAGTGGGTAAACGCGGATAGGC AGCTTGTCACTAGGGATTCTGGGTTATACAAGTAGTTAGTAGTTACTAAC TTCATGTGGAAGAAATATCCTTTGAATGAACTTTCTGCGACTGCCACCAC ACAAGACATCTTACTAATGCTCCAATTTATCTCTTAGATACAAGGAGGGT CGCGTTATCCTGGAGTACGCCCTGATCACAGAGGCAGAGGGCTTTCCGTC GGAGGCCGCCACCACGAGTCATTGAGCCGATTGAATATACAGCCGGAAAA CGGGAACCACGCATTGGCGAACCTTGTGTAGCCCTAAGTATTGAGTAGAT GGCCACAGGCGATGGCCTCTATGCATTAGACCTAGATTAGAGATCGCCGT AGTCGGCTCCGGTGTTCGGGATACCGAAGACCGATATATCGGTTGCACAT CCGCCACGGAGCACATGCGACTACGGCCCTGTCTTAACGTGACTTAAACG TAATTGTAGGCACATCTAGCACGTAAGCAGCTGCGGCGCCCAATTCTACC ATTTAAATGTCATGAGGCTGAAGTGCTAAAACGAAAAAGATGGGCTGCTA CTCAGCTGGAACATATTCGAAACTGATGATCCACACTTGTCTTTTTCAAA CAAGATCTCTAGGCCGTAATCAATCAGCAATAAAGTACCACAATAATCGA ATAGTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13276689..13277527 | 1255..417 | 4180 | 99.9 | Minus |
chrX | 22417052 | chrX | 13277589..13277817 | 421..193 | 1145 | 100 | Minus |
chrX | 22417052 | chrX | 13277960..13278154 | 195..1 | 960 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 13394011..13394850 | 1256..417 | 4200 | 100 | Minus |
X | 23527363 | X | 13394912..13395140 | 421..193 | 1145 | 100 | Minus |
X | 23527363 | X | 13395283..13395477 | 195..1 | 975 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13276689..13277523 | 421..1255 | 99 | <- | Minus |
chrX | 13277590..13277815 | 195..420 | 100 | <- | Minus |
chrX | 13277961..13278154 | 1..194 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RB | 1..333 | 303..635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RB | 1..333 | 303..635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RB | 1..333 | 303..635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RB | 1..333 | 303..635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RB | 1..333 | 303..635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RB | 16..1270 | 1..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RB | 16..1270 | 1..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RB | 16..1270 | 1..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RB | 16..1270 | 1..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RB | 39..1293 | 1..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13385914..13386748 | 421..1255 | 100 | <- | Minus |
X | 13386815..13387040 | 195..420 | 100 | <- | Minus |
X | 13387186..13387379 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13385914..13386748 | 421..1255 | 100 | <- | Minus |
X | 13386815..13387040 | 195..420 | 100 | <- | Minus |
X | 13387186..13387379 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13385914..13386748 | 421..1255 | 100 | <- | Minus |
X | 13386815..13387040 | 195..420 | 100 | <- | Minus |
X | 13387186..13387379 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13279947..13280781 | 421..1255 | 100 | <- | Minus |
arm_X | 13280848..13281073 | 195..420 | 100 | <- | Minus |
arm_X | 13281219..13281412 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13394012..13394846 | 421..1255 | 100 | <- | Minus |
X | 13394913..13395138 | 195..420 | 100 | <- | Minus |
X | 13395284..13395477 | 1..194 | 100 | Minus |
Translation from 302 to 634
> LD40977.pep MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVN LTFSNIQERVMLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKWVNADRQ LVTRDSGLYK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19499-PA | 121 | GF19499-PA | 1..112 | 1..108 | 505 | 86.6 | Plus |
Dana\GF19108-PA | 114 | GF19108-PA | 14..95 | 13..94 | 209 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19506-PA | 121 | GG19506-PA | 1..112 | 1..108 | 504 | 86.6 | Plus |
Dere\GG18944-PA | 114 | GG18944-PA | 14..95 | 13..94 | 209 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24471-PA | 121 | GH24471-PA | 1..94 | 1..94 | 488 | 96.8 | Plus |
Dgri\GH24074-PA | 114 | GH24074-PA | 14..95 | 13..94 | 209 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Yippee-PB | 110 | CG1989-PB | 1..110 | 1..110 | 585 | 100 | Plus |
Yippee-PA | 121 | CG1989-PA | 1..94 | 1..94 | 496 | 98.9 | Plus |
CG15309-PE | 114 | CG15309-PE | 14..95 | 13..94 | 204 | 45.1 | Plus |
CG15309-PD | 114 | CG15309-PD | 14..95 | 13..94 | 204 | 45.1 | Plus |
CG15309-PC | 114 | CG15309-PC | 14..95 | 13..94 | 204 | 45.1 | Plus |
CG15309-PB | 114 | CG15309-PB | 14..95 | 13..94 | 204 | 45.1 | Plus |
CG15309-PA | 114 | CG15309-PA | 14..95 | 13..94 | 204 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15336-PA | 121 | GI15336-PA | 1..94 | 1..94 | 491 | 96.8 | Plus |
Dmoj\GI15523-PA | 114 | GI15523-PA | 14..95 | 13..94 | 209 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26724-PA | 121 | GL26724-PA | 1..94 | 1..94 | 501 | 97.9 | Plus |
Dper\GL22456-PA | 114 | GL22456-PA | 14..95 | 13..94 | 206 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15174-PA | 121 | GA15174-PA | 1..94 | 1..94 | 501 | 97.9 | Plus |
Dpse\GA27919-PA | 114 | GA27919-PA | 14..95 | 13..94 | 209 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11494-PA | 121 | GM11494-PA | 1..112 | 1..108 | 504 | 86.6 | Plus |
Dsec\GM11334-PA | 114 | GM11334-PA | 14..95 | 13..94 | 209 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15888-PA | 121 | GD15888-PA | 1..112 | 1..108 | 504 | 86.6 | Plus |
Dsim\GD24655-PA | 114 | GD24655-PA | 14..95 | 13..94 | 209 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14773-PA | 121 | GJ14773-PA | 1..94 | 1..94 | 491 | 96.8 | Plus |
Dvir\GJ19280-PA | 114 | GJ19280-PA | 14..95 | 13..94 | 209 | 45.1 | Plus |
Translation from 302 to 634
> LD40977.hyp MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVN LTFSNIQERVMLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKWVNADRQ LVTRDSGLYK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Yippee-PB | 110 | CG1989-PB | 1..110 | 1..110 | 585 | 100 | Plus |
Yippee-PA | 121 | CG1989-PA | 1..94 | 1..94 | 496 | 98.9 | Plus |
CG15309-PE | 114 | CG15309-PE | 14..95 | 13..94 | 204 | 45.1 | Plus |
CG15309-PD | 114 | CG15309-PD | 14..95 | 13..94 | 204 | 45.1 | Plus |
CG15309-PC | 114 | CG15309-PC | 14..95 | 13..94 | 204 | 45.1 | Plus |