BDGP Sequence Production Resources |
Search the DGRC for LD41005
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 410 |
Well: | 5 |
Vector: | pOT2 |
Associated Gene/Transcript | TAF1C-like-RA |
Protein status: | LD41005.pep: gold |
Preliminary Size: | 2679 |
Sequenced Size: | 2773 |
Gene | Date | Evidence |
---|---|---|
CG10496 | 2001-01-01 | Release 2 assignment |
CG10496 | 2001-09-19 | Blastp of sequenced clone |
CG10496 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10496 | 2008-04-29 | Release 5.5 accounting |
CG10496 | 2008-08-15 | Release 5.9 accounting |
CG10496 | 2008-12-18 | 5.12 accounting |
2773 bp (2773 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058691
> LD41005.complete AAACGTCGTGCGTTTGGCGTTTGATTGAGTCAAATTCAATTTGTTAACTA AATTCTTTCGTGCAGAACTGGATAGCTGATCGAAGAAATCCACATGCCGC GACGCTATCAAACAGCTCTCAATTCGGCCAAATACAGTGCCCAGGTCAAG ACCAAAACTAGTGACAACGAATCCGATTCCGAAGATGATCTTCCGCCGGA TCAAGATGCTGAGGATAACAATGAGCCAGATAATCTGCGCAGCATTTTGG AAAATGCGCCGCACTTCTCTTATCCCGGCTTGAACACTGGAATGTTGGGC CAACTCTTGTACGATCATCAGGATAATCCGAAGCAGGACTTGCCAAATTG CTCGGTTACGGTGCCGCTACCCCTCTTCCTGGCAAAGGATGGACAAACTC CCCGAGTGGAGGCATGCGTCCAAAGGCCATTCCGCTACGACGATTGGACA CGGCAATTGCAATTAGGCAAGGCTATATTTGATAGGCGACTTAAAAATAT GAGACAGCGTGTACAGAAGCAGGAGCAAGGTGTACACGATGCCAGTCTGT TTGAGATGGCTGAGCACATAGCCCAACAGGAGAATTCCTTCTTCAGGGAC AGCTACGATTACTACTACACAGGCGGAAACCTAAACACGATTCCGTTTGA TGGAAACGATCAGCTGGCCATGCATGTCAGCGGTAATAAGCTCAGAGATT TGCACTTTTCCCGAGATTATGGTGAGGCGGAGTTTTGGCAACCATTGCAT TCGGCTACGATAGAGGAATCCTCCAGCGAAGTCTTTGAACTTCTTCCGCT CCACAATTTAAATCGCAGTCAAATGTTCCTGGCACGGTTGCTGAAGGAGG TTTCCCTATACGAACTTAAATGCAAAGACGAACAGGATTCGGATTCAGAT TACGAACTCATTCGCCATTGCATGTTTAGCAGTCAAGTAGCTCCTTTTAC AAGCGCTGCACAATCATTGGCCAATGCCAATACATTGGCCTTAGCTAGCC AGGATAGGTCTTTGCGCTTCGTGGATATTTCGACACAACAGGATATAGCC AAGCTTGATGTTTGCTTGCTAAAAGGACTGAAGAAAACCTCGAGTACCTG GGCACAGTTAAAGCAAGCAGAGGAAAGCACCTTTCACTGCCTAACACAGC CAGTTTTGTTTACCGTAGATGTGCGATGCAATCTGCCTCTGAATCCCTGC TTTGCCAGCGGCGTTCACTCAAAAGCTTGCGAGAGGTTCTCTTGTTTGGC CAAGGGTGTGAATCCTAATCTCTTGTATGTGGCTAGTAATCACAACTTCC ACTGTTTGGATATCAGATGCTTGGGTAAAAAGCTGACCGATCGAGCTGTC GTCACCTGGACGCATCAGATGACCTATCCACCCTGTTTTATTGACACAAG CGTTCACCAGGACAGTGAATATATTGCGTTAGGTGGACTCTTACCCAAAG ATTTGCGAATTTGTGAACTGCAAGGAGCTCAGGCAAAAAGTGTCGATGAA ATGTTCTCGCCGGCAATACCATTTGCGCCGGTAACCCTGGAAGAAGCTTT AATAGATGCTCGCTTGGGAGGATTTGTGGATGTCTATGCTGATATAGCAG AGCGGGTAACGACCTGCATTACAGGAATGCGCTTTATTGGCTTAGAGGGG GCCAGTGATCAAGCTTTTACCCAGTTGCTAACCTCCAACAGCTTGGGAGA TGTTTACTGCCAAAGACTAACGCTTAGGGATGAAGAGGAGCATGTCCAGC AGATCAGAACCGGAACTCATACAACGGAAGCCATTCGCTACCTTGCCAAT GCCGTTAATGAGCGCGTCCAACGCGAGAACATCCGCTGCACACAAGTCCA GTCGATACCAGAGATAAGAGACATCTTTCGAGATGGTGCCAAAAGATCAA AACCTGAAGAAAAACCTTTAATCGTAGAGGAAATCGAAATTGACTATGGC ATAGAAGATACTGATGTTTCAGAAGATGAAAGCCCAGCCTCTGAAAAGGT AAAGGAAGAACCTTCGGAATCCAAGAAAGGTGGTAAGAAAACGCCTAAGA AAAAAACCAAGGTGAAACCAAAACGGCAACCCAAAAGGAAAGCTGCCAGT AAGAGAAATGTTAAAAAGCAGAAGAGCATCAGTCGCGGTCCCTGGCAGAA ATCCGCTTACAAGCTGTCCCACTACACGGACATGATGTCGACCCGTTTGC TGGACGTGTGGGATATGGAGGAGTACGACACCACACGAGACGTAACAAGA GAAATGTTCGATGAGCGTATAAAGGGGAAGGAGCTGGAACCTGAACAACG CATGGCCAATTGGTTGGAACAATTGCCCAGTCAGACAGTGGTACCCACTG AGGACGAGGTGACCGAGGGAAATCCCGACATGGTTCCCGGTACAAGTCTA CCAAAGCTATATGGCGCCACTACAGCGAACTATTCAGTCATTCCAGCCCT TAATTCCGATCAGGACATCGGAGAGCGCCTTTTGAGTCCCAAAAAGGAAT CGCCTGTTGAATTTGGCCGCGAGTATTCTATCTTGCTGCCCGGCCAGAAT ACTATCATCGAGGACTATCCCTGTGCCCCGCCAGCTAAGAGGCCCAAGGT TAAACACGTAAAGGGTTTCTAGCTTAAGTTAGAGTTGTTAACCTTAATTT AAATTTAACAAAAATAAATAGCAGATTATAAAGTATATTAAATAGAAGTA AGTAGATTTAGAATTTAGATTTCTGCCAACAATATTAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17385391..17388035 | 92..2736 | 99 | <- | Minus |
chr2R | 17388113..17388203 | 1..91 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10496-RA | 1..2529 | 94..2622 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10496-RA | 1..2529 | 94..2622 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10496-RA | 1..2529 | 94..2622 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10496-RA | 1..2529 | 94..2622 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TAF1C-like-RA | 1..2529 | 94..2622 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10496-RA | 256..2991 | 1..2736 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10496-RA | 256..2991 | 1..2736 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10496-RA | 18..2753 | 1..2736 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10496-RA | 256..2991 | 1..2736 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TAF1C-like-RA | 18..2753 | 1..2736 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21501625..21501715 | 1..91 | 100 | Minus | |
2R | 21498903..21501547 | 92..2736 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21501625..21501715 | 1..91 | 100 | Minus | |
2R | 21498903..21501547 | 92..2736 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21501625..21501715 | 1..91 | 100 | Minus | |
2R | 21498903..21501547 | 92..2736 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17386408..17389052 | 92..2736 | 100 | <- | Minus |
arm_2R | 17389130..17389220 | 1..91 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21500102..21502746 | 92..2736 | 100 | <- | Minus |
2R | 21502824..21502914 | 1..91 | 100 | Minus |
Translation from 93 to 2621
> LD41005.pep MPRRYQTALNSAKYSAQVKTKTSDNESDSEDDLPPDQDAEDNNEPDNLRS ILENAPHFSYPGLNTGMLGQLLYDHQDNPKQDLPNCSVTVPLPLFLAKDG QTPRVEACVQRPFRYDDWTRQLQLGKAIFDRRLKNMRQRVQKQEQGVHDA SLFEMAEHIAQQENSFFRDSYDYYYTGGNLNTIPFDGNDQLAMHVSGNKL RDLHFSRDYGEAEFWQPLHSATIEESSSEVFELLPLHNLNRSQMFLARLL KEVSLYELKCKDEQDSDSDYELIRHCMFSSQVAPFTSAAQSLANANTLAL ASQDRSLRFVDISTQQDIAKLDVCLLKGLKKTSSTWAQLKQAEESTFHCL TQPVLFTVDVRCNLPLNPCFASGVHSKACERFSCLAKGVNPNLLYVASNH NFHCLDIRCLGKKLTDRAVVTWTHQMTYPPCFIDTSVHQDSEYIALGGLL PKDLRICELQGAQAKSVDEMFSPAIPFAPVTLEEALIDARLGGFVDVYAD IAERVTTCITGMRFIGLEGASDQAFTQLLTSNSLGDVYCQRLTLRDEEEH VQQIRTGTHTTEAIRYLANAVNERVQRENIRCTQVQSIPEIRDIFRDGAK RSKPEEKPLIVEEIEIDYGIEDTDVSEDESPASEKVKEEPSESKKGGKKT PKKKTKVKPKRQPKRKAASKRNVKKQKSISRGPWQKSAYKLSHYTDMMST RLLDVWDMEEYDTTRDVTREMFDERIKGKELEPEQRMANWLEQLPSQTVV PTEDEVTEGNPDMVPGTSLPKLYGATTANYSVIPALNSDQDIGERLLSPK KESPVEFGREYSILLPGQNTIIEDYPCAPPAKRPKVKHVKGF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12093-PA | 838 | GF12093-PA | 1..838 | 1..842 | 2508 | 58.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20774-PA | 840 | GG20774-PA | 1..840 | 1..842 | 3604 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20054-PA | 890 | GH20054-PA | 1..890 | 1..842 | 1668 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TAF1C-like-PA | 842 | CG10496-PA | 1..842 | 1..842 | 4417 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20464-PA | 882 | GI20464-PA | 1..882 | 1..842 | 1800 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17490-PA | 856 | GL17490-PA | 1..856 | 1..842 | 1959 | 48.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10354-PA | 856 | GA10354-PA | 1..856 | 1..842 | 1946 | 48.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15718-PA | 842 | GM15718-PA | 1..842 | 1..842 | 4044 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25196-PA | 835 | GD25196-PA | 1..835 | 1..842 | 4027 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22313-PA | 855 | GJ22313-PA | 1..855 | 1..842 | 1802 | 44.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20740-PA | 873 | GK20740-PA | 1..873 | 1..842 | 1831 | 45.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13711-PA | 839 | GE13711-PA | 1..839 | 1..842 | 3547 | 82.2 | Plus |
Translation from 93 to 2621
> LD41005.hyp MPRRYQTALNSAKYSAQVKTKTSDNESDSEDDLPPDQDAEDNNEPDNLRS ILENAPHFSYPGLNTGMLGQLLYDHQDNPKQDLPNCSVTVPLPLFLAKDG QTPRVEACVQRPFRYDDWTRQLQLGKAIFDRRLKNMRQRVQKQEQGVHDA SLFEMAEHIAQQENSFFRDSYDYYYTGGNLNTIPFDGNDQLAMHVSGNKL RDLHFSRDYGEAEFWQPLHSATIEESSSEVFELLPLHNLNRSQMFLARLL KEVSLYELKCKDEQDSDSDYELIRHCMFSSQVAPFTSAAQSLANANTLAL ASQDRSLRFVDISTQQDIAKLDVCLLKGLKKTSSTWAQLKQAEESTFHCL TQPVLFTVDVRCNLPLNPCFASGVHSKACERFSCLAKGVNPNLLYVASNH NFHCLDIRCLGKKLTDRAVVTWTHQMTYPPCFIDTSVHQDSEYIALGGLL PKDLRICELQGAQAKSVDEMFSPAIPFAPVTLEEALIDARLGGFVDVYAD IAERVTTCITGMRFIGLEGASDQAFTQLLTSNSLGDVYCQRLTLRDEEEH VQQIRTGTHTTEAIRYLANAVNERVQRENIRCTQVQSIPEIRDIFRDGAK RSKPEEKPLIVEEIEIDYGIEDTDVSEDESPASEKVKEEPSESKKGGKKT PKKKTKVKPKRQPKRKAASKRNVKKQKSISRGPWQKSAYKLSHYTDMMST RLLDVWDMEEYDTTRDVTREMFDERIKGKELEPEQRMANWLEQLPSQTVV PTEDEVTEGNPDMVPGTSLPKLYGATTANYSVIPALNSDQDIGERLLSPK KESPVEFGREYSILLPGQNTIIEDYPCAPPAKRPKVKHVKGF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TAF1C-like-PA | 842 | CG10496-PA | 1..842 | 1..842 | 4417 | 100 | Plus |