BDGP Sequence Production Resources |
Search the DGRC for LD41062
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 410 |
Well: | 62 |
Vector: | pOT2 |
Associated Gene/Transcript | Dip-B-RA |
Protein status: | LD41062.pep: gold |
Preliminary Size: | 2031 |
Sequenced Size: | 2030 |
Gene | Date | Evidence |
---|---|---|
CG9285 | 2001-01-01 | Release 2 assignment |
CG9285 | 2001-07-04 | Blastp of sequenced clone |
CG9285 | 2003-01-01 | Sim4 clustering to Release 3 |
Dip-B | 2008-04-29 | Release 5.5 accounting |
Dip-B | 2008-08-15 | Release 5.9 accounting |
Dip-B | 2008-12-18 | 5.12 accounting |
2030 bp (2030 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051926
> LD41062.complete CCGGCTGGTCTACTGTGAAAAAAAAACCTGGTTGCCATTCCTTTGTTTTT TGCCACTGGTTAGTTTTGGCCCAGAAACTGCATCCACCGTGGACGTGACT GGCAAGAGGAACCCACAATAACAATTCCGAAGACCGAGCGACATCCCGCT CCCAAGTTTCCAGTTTCCAGCTGCAGCGCTTTGTTCCCATCAGGGAGGTT CAGTGACGCCCCACTTGCCGATCAACCAAGTCGCGTGAGCTGCCTGCGAA AAAGTACTCATCATGGGTATCGAAAAAATTCTACCATGCACCCTCCGGCT GAACAAGCTGATGAGTCTGGCCGGCAACGACTGCCTGTGCATCATCGATC GCAATGCGGTTCCCAATGAACTGAAGGCCACCTTCGAGGAGCACCGCAAA TTCGACAAGTCCTTCGACAGCAGCATATCCTGCTTTAAGGTGCCCAACGT GGATCAACCTGTGGTCTATGCCCCCGTCTCCGAGCTCACCGACTACGACG ATGTGAGGAGCTACCAGGAGGCGGCCAAGCGGTCCATGGAGAAGGTTCTC AAGGCTGGATTCCACACGCCGTTGCTGTTTGTGCCCAAGGTTAAGCGCTT CCCCGAGGTCGAACTCTGCACCGTTCTGGGAGCTCTGGAGCAGCTTTATG TGCCCATTCAATTGCGCGAGGCAGGAACTTTGAAGGACCCCCGTGTGACC ACGCTCAGTGTCCAGATCGATGATCCAAGGGCCGAAGCTATTTTCCAGGA AGCTCTCATTCTGGAGGCCGGTCGCTTTGTGGCCCGCGACATCGGAGTTG GGGACCCGGAGCGCATGACGCCCATCCAGGTGGAGAAGTACATCAAGCCG TTGTTCGACAAGCTCAACGTGAATGTGATCAGTGACACCCAGGTGTTGCA GAAGGAGTATCCCCTGTTTGCCGCCGTAAACCGGGCTGCTGATGCAGTGG AGCGTCATCGTGGTCGCATCATTTTCCTGGAGTACAAGCCTCCAAAGCCG GCGAGAAAAACTCTGATGCTGGTCGGCAAGGGTGTTACCTATGACACCGG TGGTGCTGACATCAAGGCCGGTGGTGTGATGGCCGGTATGTCGCGCGACA AGTGTGGAGCGGCTGCTGTCGCTGGATTCATGCAGGTGGTCAGTCAACTG CAACCGGATGATATCCATGTTGTGGCTGCCCTGTGCATGGTGCGCAATTC CGTGGGCGAGGAGTGCTACGTGGCCGATGAGGTTATCACCTCGCGAGCTG GTCTTCATGTGAGGATTGGAAATACTGATGCCGAGGGTCGCATGTGCATG ACCGATGCCCTGTGCCGCATGAAGGAGTTGGTCGTGGAGCAGAATCTCCC GGATCCGCATCTTTTCACCATTGCCACCTTGACTGGTCACGCCTTCATCT CGGCAGGTGAGGGTCAGTCGATTGCCATCGATAACAGCGTGGCCCATCGG GAGGATCACGCCAGAAGACTGCAGGCTGCTGGACAGGCCTTCGGAGAGCC CTTCGAAGTGTCCATTCTCCGTCCCAGTGACTTCTCTTTTAACGCTGGAA AGGTGATTGGCGAGGATTTGGTGCAGGCCAATAATGCCCCGTCGGTGAGG ACTCCTCGCGGTCACCAGGTGCCCGCCGCCTTTATGATTAAGGCTTCTGG ACTGGACAAACACGGGTTGGATTCAATGCTGCCCATTAAGTACACCCATA TTGATATCGCCGGCAGTGCCGGTGAGCACCCAGCGATGCCCACAGCTGCC CCTCTTGTTTCCCTGGTGAAGACCCATCTGCAGAAGTAAATCATGTCCAC CTAATATTCAGGAGGATGTGTACACGATCACCACAAACAGTACTTATACA CCCACGTGCTTAGCTAACCAACAATATTATCCTACTAACTGCATCACTGT TTTTTAATAAAGGCAAAACCGAGTTCAGATTGTATTCATAAATGTATGTC ACTAATTTGGTAATCGTTTACAAATAAATGTGAAAATGATTTGTTTTTTT CCTTAAGCTTACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dip-B-RA | 2100 | Dip-B-RA | 31..2045 | 1..2015 | 10075 | 100 | Plus |
Dip-B.b | 2032 | Dip-B.b | 21..2032 | 1..2015 | 10005 | 99.8 | Plus |
Dip-B-RC | 2103 | Dip-B-RC | 176..2048 | 143..2015 | 9365 | 100 | Plus |
Dip-B-RC | 2103 | Dip-B-RC | 21..162 | 1..142 | 710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 9609208..9610568 | 652..2012 | 6730 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 9608709..9608986 | 277..554 | 1360 | 99.3 | Plus |
chr3R | 27901430 | chr3R | 9607204..9607345 | 1..142 | 710 | 100 | Plus |
chr3R | 27901430 | chr3R | 9607600..9607733 | 143..276 | 670 | 100 | Plus |
chr3R | 27901430 | chr3R | 9609051..9609151 | 552..652 | 505 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 13784316..13785679 | 652..2015 | 6820 | 100 | Plus |
3R | 32079331 | 3R | 13783817..13784094 | 277..554 | 1390 | 100 | Plus |
3R | 32079331 | 3R | 13782310..13782451 | 1..142 | 710 | 100 | Plus |
3R | 32079331 | 3R | 13782708..13782841 | 143..276 | 670 | 100 | Plus |
3R | 32079331 | 3R | 13784159..13784259 | 552..652 | 505 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 13525147..13526510 | 652..2015 | 6820 | 100 | Plus |
3R | 31820162 | 3R | 13524648..13524925 | 277..554 | 1390 | 100 | Plus |
3R | 31820162 | 3R | 13523141..13523282 | 1..142 | 710 | 100 | Plus |
3R | 31820162 | 3R | 13523539..13523672 | 143..276 | 670 | 100 | Plus |
3R | 31820162 | 3R | 13524990..13525090 | 552..652 | 505 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9607204..9607345 | 1..142 | 100 | -> | Plus |
chr3R | 9607600..9607733 | 143..276 | 100 | -> | Plus |
chr3R | 9608709..9608985 | 277..553 | 99 | -> | Plus |
chr3R | 9609053..9609151 | 554..652 | 100 | -> | Plus |
chr3R | 9609209..9610568 | 653..2012 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-B-RB | 1..1527 | 263..1789 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-B-RB | 1..1527 | 263..1789 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-B-RA | 1..1527 | 263..1789 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-B-RB | 1..1527 | 263..1789 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-B-RC | 1..1527 | 263..1789 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-B-RA | 21..2032 | 1..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-B-RA | 21..2032 | 1..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-B-RA | 21..2032 | 1..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-B-RA | 21..2032 | 1..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dip-B-RA | 23..2034 | 1..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13782708..13782841 | 143..276 | 100 | -> | Plus |
3R | 13783817..13784093 | 277..553 | 100 | -> | Plus |
3R | 13784161..13784259 | 554..652 | 100 | -> | Plus |
3R | 13782310..13782451 | 1..142 | 100 | -> | Plus |
3R | 13784317..13785676 | 653..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13782708..13782841 | 143..276 | 100 | -> | Plus |
3R | 13783817..13784093 | 277..553 | 100 | -> | Plus |
3R | 13784161..13784259 | 554..652 | 100 | -> | Plus |
3R | 13782310..13782451 | 1..142 | 100 | -> | Plus |
3R | 13784317..13785676 | 653..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13782708..13782841 | 143..276 | 100 | -> | Plus |
3R | 13783817..13784093 | 277..553 | 100 | -> | Plus |
3R | 13784161..13784259 | 554..652 | 100 | -> | Plus |
3R | 13782310..13782451 | 1..142 | 100 | -> | Plus |
3R | 13784317..13785676 | 653..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9608032..9608173 | 1..142 | 100 | -> | Plus |
arm_3R | 9608430..9608563 | 143..276 | 100 | -> | Plus |
arm_3R | 9609539..9609815 | 277..553 | 100 | -> | Plus |
arm_3R | 9609883..9609981 | 554..652 | 100 | -> | Plus |
arm_3R | 9610039..9611398 | 653..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13523141..13523282 | 1..142 | 100 | -> | Plus |
3R | 13523539..13523672 | 143..276 | 100 | -> | Plus |
3R | 13524648..13524924 | 277..553 | 100 | -> | Plus |
3R | 13524992..13525090 | 554..652 | 100 | -> | Plus |
3R | 13525148..13526507 | 653..2012 | 100 | Plus |
Translation from 262 to 1788
> LD41062.hyp MGIEKILPCTLRLNKLMSLAGNDCLCIIDRNAVPNELKATFEEHRKFDKS FDSSISCFKVPNVDQPVVYAPVSELTDYDDVRSYQEAAKRSMEKVLKAGF HTPLLFVPKVKRFPEVELCTVLGALEQLYVPIQLREAGTLKDPRVTTLSV QIDDPRAEAIFQEALILEAGRFVARDIGVGDPERMTPIQVEKYIKPLFDK LNVNVISDTQVLQKEYPLFAAVNRAADAVERHRGRIIFLEYKPPKPARKT LMLVGKGVTYDTGGADIKAGGVMAGMSRDKCGAAAVAGFMQVVSQLQPDD IHVVAALCMVRNSVGEECYVADEVITSRAGLHVRIGNTDAEGRMCMTDAL CRMKELVVEQNLPDPHLFTIATLTGHAFISAGEGQSIAIDNSVAHREDHA RRLQAAGQAFGEPFEVSILRPSDFSFNAGKVIGEDLVQANNAPSVRTPRG HQVPAAFMIKASGLDKHGLDSMLPIKYTHIDIAGSAGEHPAMPTAAPLVS LVKTHLQK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dip-B-PD | 508 | CG9285-PD | 1..508 | 1..508 | 2606 | 100 | Plus |
Dip-B-PB | 508 | CG9285-PB | 1..508 | 1..508 | 2606 | 100 | Plus |
Dip-B-PC | 508 | CG9285-PC | 1..508 | 1..508 | 2606 | 100 | Plus |
Dip-B-PA | 508 | CG9285-PA | 1..508 | 1..508 | 2606 | 100 | Plus |
grsm-PB | 558 | CG7340-PB | 292..434 | 244..392 | 241 | 40 | Plus |
Translation from 262 to 1788
> LD41062.pep MGIEKILPCTLRLNKLMSLAGNDCLCIIDRNAVPNELKATFEEHRKFDKS FDSSISCFKVPNVDQPVVYAPVSELTDYDDVRSYQEAAKRSMEKVLKAGF HTPLLFVPKVKRFPEVELCTVLGALEQLYVPIQLREAGTLKDPRVTTLSV QIDDPRAEAIFQEALILEAGRFVARDIGVGDPERMTPIQVEKYIKPLFDK LNVNVISDTQVLQKEYPLFAAVNRAADAVERHRGRIIFLEYKPPKPARKT LMLVGKGVTYDTGGADIKAGGVMAGMSRDKCGAAAVAGFMQVVSQLQPDD IHVVAALCMVRNSVGEECYVADEVITSRAGLHVRIGNTDAEGRMCMTDAL CRMKELVVEQNLPDPHLFTIATLTGHAFISAGEGQSIAIDNSVAHREDHA RRLQAAGQAFGEPFEVSILRPSDFSFNAGKVIGEDLVQANNAPSVRTPRG HQVPAAFMIKASGLDKHGLDSMLPIKYTHIDIAGSAGEHPAMPTAAPLVS LVKTHLQK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18621-PA | 572 | GF18621-PA | 1..509 | 1..508 | 2425 | 88 | Plus |
Dana\GF18094-PA | 564 | GF18094-PA | 298..540 | 244..505 | 250 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19841-PA | 508 | GG19841-PA | 1..508 | 1..508 | 2628 | 96.7 | Plus |
Dere\GG17089-PA | 656 | GG17089-PA | 356..632 | 205..505 | 249 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14277-PA | 506 | GH14277-PA | 1..504 | 1..506 | 2025 | 72.9 | Plus |
Dgri\GH19202-PA | 558 | GH19202-PA | 236..534 | 188..505 | 254 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dip-B-PD | 508 | CG9285-PD | 1..508 | 1..508 | 2606 | 100 | Plus |
Dip-B-PB | 508 | CG9285-PB | 1..508 | 1..508 | 2606 | 100 | Plus |
Dip-B-PC | 508 | CG9285-PC | 1..508 | 1..508 | 2606 | 100 | Plus |
Dip-B-PA | 508 | CG9285-PA | 1..508 | 1..508 | 2606 | 100 | Plus |
grsm-PB | 558 | CG7340-PB | 292..434 | 244..392 | 241 | 40 | Plus |
grsm-PF | 655 | CG7340-PF | 389..531 | 244..392 | 241 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23169-PA | 507 | GI23169-PA | 1..505 | 1..506 | 2072 | 74.5 | Plus |
Dmoj\GI24235-PA | 529 | GI24235-PA | 263..505 | 244..505 | 245 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23475-PA | 508 | GL23475-PA | 1..506 | 1..506 | 2345 | 84.8 | Plus |
Dper\GL23157-PA | 551 | GL23157-PA | 278..527 | 236..505 | 256 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21669-PA | 508 | GA21669-PA | 1..506 | 1..506 | 2342 | 84.6 | Plus |
Dpse\GA20276-PA | 551 | GA20276-PA | 278..527 | 236..505 | 256 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24136-PA | 508 | GM24136-PA | 1..508 | 1..508 | 2667 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18934-PA | 508 | GD18934-PA | 1..508 | 1..508 | 2680 | 99 | Plus |
Dsim\GD20533-PA | 498 | GD20533-PA | 291..416 | 244..375 | 229 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14485-PA | 507 | GJ14485-PA | 1..505 | 1..506 | 2069 | 74.7 | Plus |
Dvir\GJ10808-PA | 555 | GJ10808-PA | 231..531 | 199..505 | 248 | 30.8 | Plus |