BDGP Sequence Production Resources |
Search the DGRC for LD41184
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 411 |
Well: | 84 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9098-RB |
Protein status: | LD41184.pep: gold |
Preliminary Size: | 2795 |
Sequenced Size: | 2967 |
Gene | Date | Evidence |
---|---|---|
CG9098 | 2001-11-29 | Blastp of sequenced clone |
CG9098 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9098 | 2008-04-29 | Release 5.5 accounting |
CG9098 | 2008-08-15 | Release 5.9 accounting |
CG9098 | 2008-12-18 | 5.12 accounting |
2967 bp (2967 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069645
> LD41184.complete TTCAGACTACTACAATACGAAGGACCTTAAACTGCACTCCTTTTTTTTTC GAGACTAGTTCTGTGCTAGTGAAGTCTATCTATTTTCAAATGGAGAGTTT TGTTTAGAAATCGTATTATTCAGGCAGCTGGTGAATCGAGTTCTTTCGTA CTACTGAACAATTGGGTTTGGGTGTGTCCTGTCCTAAATTTTCTACTACA AAATGGGCGTAGCAGCTACGAGGAACTGAGGCCGCGCTCCAAGTGCAACA GTCCCCATTGGGCCATCGAAGACAGCAGGATGGAGGGCTATGGGAGCAGC AATGCCACCACTCCGCTGGCCACCGCCCAGCCCAGTCCCAGCGAGCAACA GGAGGCCATCGCCCTGAAGAAGGCGCTCGAGTGGGAGCTGAGTTTGGACG CCAGGGAGCTGCGTTCCCACGCCTGGTACCACGGCGCACTGCCACGCCAG CGGGCCGAGGAGATCGTGCAGCGCGAAGGCGACTTCCTGGTCCGCGACTG CGCCTCCCAGCCGGACAACTATGTGCTCAGTTGCCGGAGCAAAGCGGCTG TACTGCACTTCGTACTTAATAAGTTGGTGCTTCAACCGGAGACGGTTTAC GAACGTGTGCAGTACCAGTTTGAGGAGGATGCCTTCGATACGGTGCCCGA CCTAATTACCTTCTACGTGGGATCCGGCAAGCCCATCTCGTCAGCATCGG GAGCGCTCATTCAGTTTCCCTGCAATCGCACCTATCCGCTCTCCTTCTAC GGCCACAAGATCGTGGGCAACCAACTGCACACGCAGATGCTGGCCGGTCT GCGAGGTCTGAGTCCTCTGAACTCGCCGATGGGCAGCAATGGTGCAGTGG GAGCAGGTATGAACGCTACCTTTCGCTTCGAACCGCAGCAGCAGCAGCAG CAACAGCTCTCGCCGATGGCTGGCTCACCGGCCAGTCCGCACTGCTCGCC GCCGCGGGCGCGTAGAGAGGTGCCTCCACCGCCGCGGCTGCCGTGCAAGA AGCAACAGCGCTCCCAGAGCCTCACACCGGCCCAGGCCATGTTGGTCAGC AACATCAACAAGCTTCAGGAGCAACAACTACAGATGCAGGAGCTCGAGAA TGGCAATGGCAACGGAATAATGCGCTTCCAGACAATCGCCAGGTGCAATC CGACCAGTGAGCAGCACCTGGAGAGCAAGTTCACAACCCACTCGCTGCCC AGACCCAACACTTCGGCGGCGCACGCTCTGCGCCAGCAAGCGGTGGCCCG AATCTCGAGCCTGGCGAGAAACTGCAGCCTGGACTCGCCGTCGGACTCAC GGCCGCCCAGTCCGCCGCCCAAGCCACGCAAGGAACCCATGGCAGCGGTG CTGGCATACCAGGCCAGTGGATCCGACTCGGGGAACGGGTCCGGTGATTC GGCTCTAGGGGATGCATGTGAGGCGAGCGTACAGCGGGGTGTGATAATCA AGAATCCCCGATTCATGACCACTTCGGTCTCGAACGGAACGCTGAAGAGC TTCACGGAGTTCGACGTCCTGGCCGCTGAGGAAGAACTATTCACCATGGC CATAGAAGAAGTTAAAACAGCAAGCAAGTTTGACTTTGAGAACTTTGTTA CTTTGCTACTGCCATCTGTGGAGAACAAGCCCCTGGATGGCGATGCCCTC AACACGTTCAAGATGATGCTTCTGGAGACGGGCCCAAAGCTGCTGGCGGA GCACATCACTCGCATCGACATTGCCCTGTTTTTGGAGGAGCCGTCGAACG AGGAGGACTACTATCTGAGCTGTTCGGGTCTTGAGCTGCTAACACTGCCC CATGGAAAGGTCTTTAGGGAGGACATAATAGAGCGGACGCAGTGCATCAA GCTGATGGTCGCTGTGACCATACTCACCTGTCAAACGGATCTGGACCGAG CCCAACTGCTCAGTAAATGGATTCAGATCGCAGTGGAAACTAAGACGGCT CTCGGCAATCTGTTTGGATTCTGCGCCATCATGTTGGGCCTGTGCATGCA ACAGATCCAAAAGCTCGACCAGGCCTGGCACATCCTGAGGCAACAGTACA CGGACAGCGCCTTCACCTTCGAGGCCAAGTTGCGACCCACGTTGAGCATC ATGAACGAGGCCTCCAATCCACAGGCTCCAAACACAACCGTTCCCCATGT TCTGCTGTATGCACTACTGATCGATCGACCCGTTATGGACATCATAAACC ACTCCAACATTGACGATCGCCCAGCTCTGTACCACACCTGTATTGCTCCT TGGGAGTCGAAAGCGGATGACTTTGGCATGACCATTAATTTCCAGCACCT GGATGCATCGCGTGGCTTCCTGAAGAACTTGGAACTGTATCGAAAGAATG CCAAGATCATCCTGGAGGATGCTAGTCCTCGGCTCGATGAGCTTCTAGCT GATGCTTTTCGAACCGAGTTCCATGTCAAGTTCCTATGGGGCAGTTCCGG AGCAACGGCCAAGGCCGAAGATCGGCACAACAAACTGGAAAAGGTGCTCA CCCTGATGGCCGACAAGTTTTGCATGATGGCCGAGCAGTAAGCTGTGAAA TAATATGGACTTAAGTTTCTGGCCGATATCAAATGAACTAACTTAAAGCG AACCTATGCCAGGACCTCCTATCTACTATCCACAATGTCTCCAGACCCTC CGCATCTTTAAATTTCGTGCTGTCTCTACCTCAGCCTGAGTATACATATA TCATTTCAGCAGAAACACAAAAGCACTTTATGTTACAGTTCAAATACCGT TTAATCCTTAGTTAAGTTAAATTTAGTATTGTACGCGTATGCAAAACGAA CTAGTTATCATATTTTTATGGAAAAACTCTTTAAGAGCCACCTCACTCTG ATGTACTACCAAAGTCTTGTATTTACTTACCAATCCCATTATTTATTCTA TGCAATAACTTACTCGACTATAGAAGAGACAATATACATTAATCAAAAAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6008291..6009293 | 1574..572 | 5000 | 99.9 | Minus |
chr2L | 23010047 | chr2L | 6006556..6007089 | 2944..2411 | 2670 | 100 | Minus |
chr2L | 23010047 | chr2L | 6007806..6008240 | 2004..1570 | 2175 | 100 | Minus |
chr2L | 23010047 | chr2L | 6007147..6007556 | 2411..2002 | 2050 | 100 | Minus |
chr2L | 23010047 | chr2L | 6009360..6009724 | 577..213 | 1810 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 6010016..6010230 | 215..1 | 1075 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6009240..6010242 | 1574..572 | 5000 | 99.9 | Minus |
2L | 23513712 | 2L | 6007482..6008038 | 2967..2411 | 2770 | 99.8 | Minus |
2L | 23513712 | 2L | 6008755..6009189 | 2004..1570 | 2175 | 100 | Minus |
2L | 23513712 | 2L | 6008096..6008505 | 2411..2002 | 2050 | 100 | Minus |
2L | 23513712 | 2L | 6010309..6010673 | 577..213 | 1810 | 99.7 | Minus |
2L | 23513712 | 2L | 6010965..6011179 | 215..1 | 1075 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6009240..6010242 | 1574..572 | 5000 | 99.9 | Minus |
2L | 23513712 | 2L | 6007482..6008038 | 2967..2411 | 2770 | 99.8 | Minus |
2L | 23513712 | 2L | 6008755..6009189 | 2004..1570 | 2175 | 100 | Minus |
2L | 23513712 | 2L | 6008096..6008505 | 2411..2002 | 2050 | 100 | Minus |
2L | 23513712 | 2L | 6010309..6010673 | 577..213 | 1810 | 99.7 | Minus |
2L | 23513712 | 2L | 6010965..6011179 | 215..1 | 1075 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G5 | 4856 | G5 G5_DM 4856bp | 2858..2889 | 389..420 | 124 | 87.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6006556..6007088 | 2412..2944 | 100 | <- | Minus |
chr2L | 6007147..6007553 | 2005..2411 | 100 | <- | Minus |
chr2L | 6007806..6008240 | 1570..2004 | 100 | <- | Minus |
chr2L | 6008296..6009291 | 574..1569 | 97 | <- | Minus |
chr2L | 6009364..6009721 | 216..573 | 100 | <- | Minus |
chr2L | 6010016..6010230 | 1..215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9098-RA | 507..2835 | 213..2541 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9098-RA | 507..2835 | 213..2541 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9098-RA | 507..2835 | 213..2541 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9098-RA | 507..2835 | 213..2541 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9098-RA | 507..2835 | 213..2541 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9098-RB | 25..2968 | 1..2944 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9098-RB | 25..2968 | 1..2944 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9098-RB | 55..2998 | 1..2944 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9098-RB | 25..2968 | 1..2944 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9098-RB | 55..2998 | 1..2944 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6007505..6008037 | 2412..2944 | 100 | <- | Minus |
2L | 6008096..6008502 | 2005..2411 | 100 | <- | Minus |
2L | 6008755..6009189 | 1570..2004 | 100 | <- | Minus |
2L | 6009245..6010240 | 574..1569 | 100 | <- | Minus |
2L | 6010313..6010670 | 216..573 | 100 | <- | Minus |
2L | 6010965..6011179 | 1..215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6007505..6008037 | 2412..2944 | 100 | <- | Minus |
2L | 6008096..6008502 | 2005..2411 | 100 | <- | Minus |
2L | 6008755..6009189 | 1570..2004 | 100 | <- | Minus |
2L | 6009245..6010240 | 574..1569 | 100 | <- | Minus |
2L | 6010313..6010670 | 216..573 | 100 | <- | Minus |
2L | 6010965..6011179 | 1..215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6007505..6008037 | 2412..2944 | 100 | <- | Minus |
2L | 6008096..6008502 | 2005..2411 | 100 | <- | Minus |
2L | 6008755..6009189 | 1570..2004 | 100 | <- | Minus |
2L | 6009245..6010240 | 574..1569 | 100 | <- | Minus |
2L | 6010313..6010670 | 216..573 | 100 | <- | Minus |
2L | 6010965..6011179 | 1..215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6007505..6008037 | 2412..2944 | 100 | <- | Minus |
arm_2L | 6008096..6008502 | 2005..2411 | 100 | <- | Minus |
arm_2L | 6008755..6009189 | 1570..2004 | 100 | <- | Minus |
arm_2L | 6009245..6010240 | 574..1569 | 100 | <- | Minus |
arm_2L | 6010313..6010670 | 216..573 | 100 | <- | Minus |
arm_2L | 6010965..6011179 | 1..215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6007505..6008037 | 2412..2944 | 100 | <- | Minus |
2L | 6008096..6008502 | 2005..2411 | 100 | <- | Minus |
2L | 6008755..6009189 | 1570..2004 | 100 | <- | Minus |
2L | 6009245..6010240 | 574..1569 | 100 | <- | Minus |
2L | 6010313..6010670 | 216..573 | 100 | <- | Minus |
2L | 6010965..6011179 | 1..215 | 100 | Minus |
Translation from 279 to 2540
> LD41184.pep MEGYGSSNATTPLATAQPSPSEQQEAIALKKALEWELSLDARELRSHAWY HGALPRQRAEEIVQREGDFLVRDCASQPDNYVLSCRSKAAVLHFVLNKLV LQPETVYERVQYQFEEDAFDTVPDLITFYVGSGKPISSASGALIQFPCNR TYPLSFYGHKIVGNQLHTQMLAGLRGLSPLNSPMGSNGAVGAGMNATFRF EPQQQQQQQLSPMAGSPASPHCSPPRARREVPPPPRLPCKKQQRSQSLTP AQAMLVSNINKLQEQQLQMQELENGNGNGIMRFQTIARCNPTSEQHLESK FTTHSLPRPNTSAAHALRQQAVARISSLARNCSLDSPSDSRPPSPPPKPR KEPMAAVLAYQASGSDSGNGSGDSALGDACEASVQRGVIIKNPRFMTTSV SNGTLKSFTEFDVLAAEEELFTMAIEEVKTASKFDFENFVTLLLPSVENK PLDGDALNTFKMMLLETGPKLLAEHITRIDIALFLEEPSNEEDYYLSCSG LELLTLPHGKVFREDIIERTQCIKLMVAVTILTCQTDLDRAQLLSKWIQI AVETKTALGNLFGFCAIMLGLCMQQIQKLDQAWHILRQQYTDSAFTFEAK LRPTLSIMNEASNPQAPNTTVPHVLLYALLIDRPVMDIINHSNIDDRPAL YHTCIAPWESKADDFGMTINFQHLDASRGFLKNLELYRKNAKIILEDASP RLDELLADAFRTEFHVKFLWGSSGATAKAEDRHNKLEKVLTLMADKFCMM AEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14287-PA | 938 | GF14287-PA | 194..934 | 1..752 | 3318 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24262-PA | 944 | GG24262-PA | 192..944 | 1..753 | 3959 | 97.6 | Plus |
Dere\GG16379-PA | 269 | GG16379-PA | 10..90 | 47..129 | 153 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10712-PA | 944 | GH10712-PA | 194..940 | 1..748 | 3105 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9098-PC | 753 | CG9098-PC | 1..753 | 1..753 | 3901 | 100 | Plus |
CG9098-PB | 753 | CG9098-PB | 1..753 | 1..753 | 3901 | 100 | Plus |
CG9098-PA | 944 | CG9098-PA | 192..944 | 1..753 | 3901 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11294-PA | 949 | GI11294-PA | 192..948 | 1..751 | 3154 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19090-PA | 963 | GL19090-PA | 193..963 | 1..753 | 3211 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21540-PA | 965 | GA21540-PA | 193..965 | 1..753 | 3209 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17975-PA | 870 | GM17975-PA | 321..870 | 204..753 | 2919 | 98.7 | Plus |
Dsec\GM17975-PA | 870 | GM17975-PA | 192..320 | 1..129 | 691 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22611-PA | 944 | GD22611-PA | 192..944 | 1..753 | 4024 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12514-PA | 952 | GJ12514-PA | 192..951 | 1..751 | 3204 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15403-PA | 969 | GK15403-PA | 199..968 | 1..751 | 3099 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18960-PA | 943 | GE18960-PA | 192..943 | 1..753 | 3991 | 98.3 | Plus |
Translation from 279 to 2540
> LD41184.hyp MEGYGSSNATTPLATAQPSPSEQQEAIALKKALEWELSLDARELRSHAWY HGALPRQRAEEIVQREGDFLVRDCASQPDNYVLSCRSKAAVLHFVLNKLV LQPETVYERVQYQFEEDAFDTVPDLITFYVGSGKPISSASGALIQFPCNR TYPLSFYGHKIVGNQLHTQMLAGLRGLSPLNSPMGSNGAVGAGMNATFRF EPQQQQQQQLSPMAGSPASPHCSPPRARREVPPPPRLPCKKQQRSQSLTP AQAMLVSNINKLQEQQLQMQELENGNGNGIMRFQTIARCNPTSEQHLESK FTTHSLPRPNTSAAHALRQQAVARISSLARNCSLDSPSDSRPPSPPPKPR KEPMAAVLAYQASGSDSGNGSGDSALGDACEASVQRGVIIKNPRFMTTSV SNGTLKSFTEFDVLAAEEELFTMAIEEVKTASKFDFENFVTLLLPSVENK PLDGDALNTFKMMLLETGPKLLAEHITRIDIALFLEEPSNEEDYYLSCSG LELLTLPHGKVFREDIIERTQCIKLMVAVTILTCQTDLDRAQLLSKWIQI AVETKTALGNLFGFCAIMLGLCMQQIQKLDQAWHILRQQYTDSAFTFEAK LRPTLSIMNEASNPQAPNTTVPHVLLYALLIDRPVMDIINHSNIDDRPAL YHTCIAPWESKADDFGMTINFQHLDASRGFLKNLELYRKNAKIILEDASP RLDELLADAFRTEFHVKFLWGSSGATAKAEDRHNKLEKVLTLMADKFCMM AEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9098-PC | 753 | CG9098-PC | 1..753 | 1..753 | 3901 | 100 | Plus |
CG9098-PB | 753 | CG9098-PB | 1..753 | 1..753 | 3901 | 100 | Plus |
CG9098-PA | 944 | CG9098-PA | 192..944 | 1..753 | 3901 | 100 | Plus |