BDGP Sequence Production Resources |
Search the DGRC for LD41227
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 412 |
Well: | 27 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6443-RA |
Protein status: | LD41227.pep: gold |
Preliminary Size: | 1347 |
Sequenced Size: | 1179 |
Gene | Date | Evidence |
---|---|---|
CG17118 | 2001-01-01 | Release 2 assignment |
CG6443 | 2001-01-01 | Release 2 assignment |
CG6443 | 2001-11-09 | Blastp of sequenced clone |
CG6443 | 2008-04-29 | Release 5.5 accounting |
CG6443 | 2008-08-15 | Release 5.9 accounting |
CG6443 | 2008-12-18 | 5.12 accounting |
1179 bp (1179 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069646
> LD41227.complete CATTTGTTATTGCTCATAACAGAATTTCTCCATTTACTACAACCTGAAGA TATATAGTTATTTATATCGTTAGTTTATTTAAATTTGCCCAACAAGGAAT TCCCAGGAAATATATTGTAATTCTTGAGATAAATATATAATCATGGGTTG CGATGGAGGAACTATTCCCAGGCGCGATGAGCTGGTGCGCGTGAAGCAAA AGCCAGAGCAGAAAGACAAAGATGCGGAGAGGGAGTTCCGTTGGCGCCAC TGCACCTTGACCCAGCAAAGCCTCCAGGAGCCGATCGCCATGTGCGGCAT GGGTAGGCTCTATTCCAAGCAGAGCGTCATTGAGCGACTGCTGGAGAAGG AACCGATGCCAGAGACAGCTGCGCACGTGAAGAGCATGAAGGACATTCGC CAGCTTAATCCCACACCCAATCCCGCCTTCACCGAGGAGGACAAAACTGA GGGACTGCTGGACACACGACATTCTCCTTACATCTGCAAGCTGATTGGCC TGGAGATGTCCGGCAAATTTCGCTTTGTGGCCCTTTGGAGCTGCGGATGC GTTTTATCAGAGCGTGCCTTGAAACAGATCAAAGGCAGTGTGGCTAGCAC TTGTCCGCTGTGCCAGGCTGCCTATAGCGTTGAGGACGTGGTGGTCCTCA ATGGCAACGAGGAGGACATGGAGCTCATGCGGGTCAAGATGGAAATGCGT GCGGCCAAGCGTAAGTCCTCCAAAAAGGACAAGAAGAGTGCCAAAAAGGT GGAGGTGAAAGCGGAGCCCGCAGAGGAACAGGAGCCAGTGGCGTCCACAT CCAAGGCTGCAGCCGCAGAGAAGCCCACTACAAGCACAAAAACCAAGGCG GTGGCGCCGGTCAAACGACTGGGCGCCGTTAATGCAATGCAGGATCCCGA ACTGAAGCGTCTCAAGAGCGACTTCAGCGTGGCCAAGGACCCGAAGGCCA GCGATGTTTACAAGTCCCTTTTCACCTCCCATAAAACCGAAAAGGACCAG GAGCGCGCCCACTGGGTCACCTATAATCCATTCTACAATTAGTCTAGATT TCGTTTAAGTTTGCTGTGTTAACTCAGTCACATGTCCATAGTTTGATCGT TGAAACCACACACACAGTTTCAAAATATACAACCGACAATGTAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10728138..10729071 | 209..1142 | 4655 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 10727942..10728077 | 76..211 | 650 | 98.5 | Plus |
chr2L | 23010047 | chr2L | 10727789..10727871 | 1..83 | 400 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10729369..10730303 | 209..1143 | 4675 | 100 | Plus |
2L | 23513712 | 2L | 10729181..10729308 | 84..211 | 640 | 100 | Plus |
2L | 23513712 | 2L | 10729020..10729102 | 1..83 | 415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10727789..10727871 | 1..83 | 98 | -> | Plus |
chr2L | 10727950..10728077 | 84..211 | 100 | -> | Plus |
chr2L | 10728141..10729071 | 212..1142 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6443-RA | 1..900 | 143..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6443-RA | 1..900 | 143..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6443-RA | 1..900 | 143..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6443-RA | 1..900 | 143..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6443-RA | 1..900 | 143..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6443-RA | 46..1187 | 1..1142 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6443-RA | 46..1187 | 1..1142 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6443-RA | 43..1184 | 1..1142 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6443-RA | 46..1187 | 1..1142 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6443-RA | 43..1184 | 1..1142 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10729020..10729102 | 1..83 | 100 | -> | Plus |
2L | 10729181..10729308 | 84..211 | 100 | -> | Plus |
2L | 10729372..10730302 | 212..1142 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10729020..10729102 | 1..83 | 100 | -> | Plus |
2L | 10729181..10729308 | 84..211 | 100 | -> | Plus |
2L | 10729372..10730302 | 212..1142 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10729020..10729102 | 1..83 | 100 | -> | Plus |
2L | 10729181..10729308 | 84..211 | 100 | -> | Plus |
2L | 10729372..10730302 | 212..1142 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10729020..10729102 | 1..83 | 100 | -> | Plus |
arm_2L | 10729181..10729308 | 84..211 | 100 | -> | Plus |
arm_2L | 10729372..10730302 | 212..1142 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10729372..10730302 | 212..1142 | 100 | Plus | |
2L | 10729020..10729102 | 1..83 | 100 | -> | Plus |
2L | 10729181..10729308 | 84..211 | 100 | -> | Plus |
Translation from 142 to 1041
> LD41227.pep MGCDGGTIPRRDELVRVKQKPEQKDKDAEREFRWRHCTLTQQSLQEPIAM CGMGRLYSKQSVIERLLEKEPMPETAAHVKSMKDIRQLNPTPNPAFTEED KTEGLLDTRHSPYICKLIGLEMSGKFRFVALWSCGCVLSERALKQIKGSV ASTCPLCQAAYSVEDVVVLNGNEEDMELMRVKMEMRAAKRKSSKKDKKSA KKVEVKAEPAEEQEPVASTSKAAAAEKPTTSTKTKAVAPVKRLGAVNAMQ DPELKRLKSDFSVAKDPKASDVYKSLFTSHKTEKDQERAHWVTYNPFYN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15821-PA | 301 | GF15821-PA | 1..301 | 1..299 | 1305 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23670-PA | 299 | GG23670-PA | 1..299 | 1..299 | 1549 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10425-PA | 302 | GH10425-PA | 1..302 | 1..299 | 1209 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6443-PA | 299 | CG6443-PA | 1..299 | 1..299 | 1549 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23474-PA | 304 | GI23474-PA | 1..304 | 1..299 | 1201 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26629-PA | 295 | GL26629-PA | 1..295 | 1..299 | 1256 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19597-PA | 295 | GA19597-PA | 1..295 | 1..299 | 1251 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18716-PA | 299 | GM18716-PA | 1..299 | 1..299 | 1568 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20679-PA | 300 | GJ20679-PA | 1..300 | 1..299 | 1207 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14667-PA | 299 | GK14667-PA | 1..299 | 1..299 | 1135 | 71.1 | Plus |
Dwil\GK12490-PA | 104 | GK12490-PA | 35..102 | 45..110 | 214 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18483-PA | 299 | GE18483-PA | 1..299 | 1..299 | 1458 | 95 | Plus |
Translation from 142 to 1041
> LD41227.hyp MGCDGGTIPRRDELVRVKQKPEQKDKDAEREFRWRHCTLTQQSLQEPIAM CGMGRLYSKQSVIERLLEKEPMPETAAHVKSMKDIRQLNPTPNPAFTEED KTEGLLDTRHSPYICKLIGLEMSGKFRFVALWSCGCVLSERALKQIKGSV ASTCPLCQAAYSVEDVVVLNGNEEDMELMRVKMEMRAAKRKSSKKDKKSA KKVEVKAEPAEEQEPVASTSKAAAAEKPTTSTKTKAVAPVKRLGAVNAMQ DPELKRLKSDFSVAKDPKASDVYKSLFTSHKTEKDQERAHWVTYNPFYN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6443-PA | 299 | CG6443-PA | 1..299 | 1..299 | 1549 | 100 | Plus |