Clone LD41277 Report

Search the DGRC for LD41277

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:412
Well:77
Vector:pOT2
Associated Gene/TranscriptCG6227-RA
Protein status:LD41277.pep: gold
Sequenced Size:4041

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6227 2003-01-01 Sim4 clustering to Release 3
CG6227 2004-10-02 Blastp of sequenced clone
CG6227 2008-04-29 Release 5.5 accounting
CG6227 2008-08-15 Release 5.9 accounting
CG6227 2008-12-18 5.12 accounting

Clone Sequence Records

LD41277.complete Sequence

4041 bp (4041 high quality bases) assembled on 2004-10-02

GenBank Submission: BT016090

> LD41277.complete
CTGACGTTTAATAAGTAGTATTTTGTGATATGTTGCGAATGAAAATTCGC
TAATATCTGTATAAAAACAATTGCATTCTACTGCGCGCCGTGTCCGGGTA
ACTAAGGGCAGTGGGAATCGCGCATAGCCAGCACCGACCGTCATTTGGAG
GCGTTGCATCGTCAAACCGGCGAACAGAAATCCAAAGAAAGCGCCATGTC
GAAAAGTTCCGGGCGCGATCGAGACAGGGAGCGCGACCGGGAGAGAGAGA
GGGAGCGCGACCGTGAGAGAGAGCGCGACAGGGATCGTGAGCGGGACAAC
CGGCACGACAGTCGCAGTCGCGACTATGATATGGGCAAGTCCAGGAACGG
TGGAGGCGGCGGAGCCGGTGGTGGCTCCCGGAACATGCGCGAAGACCGGA
AGCGCGGAAAGGACATGATCAGCGATCGTGGAAAACGCGACGATAAGCGG
AGGAAGTGCTCCAGGTCAAAGGATTACGAGAAGGACAATTCGCCCCACTA
CAGGCGTCTGGACAAGGATCGTGACCGTGATCGGGATCGCGATCGGCAGC
GAGAGAAGGAACGAGAGCGCGAGAAGGAAAAGGAGCGCGAGAAGGAAAAG
GAGCGCGAGCGGGACAAGGATCGGGAGCGAGATCGCCAGCGAGAAAAGGA
ATCCGATAGCAGACGAGCGGCCGCAGCTGCTCCGCTGATTATACCATTGC
TCTCGACCAGCTGCTCCGAAGAGGAGGTGGAGGAGATCGACAAGGAGGAG
CAGCAGCGTCGTCTGGAGCAAGAGATGATTAAGCGGCGCGAGCGAATCGA
ACGTTGGCGCGCGGAACGCAAGCGGGACACTAAGGCGGCTGTCGTGGCGC
CGTCGCTGGTCAATTCCGCAAAGAAATGGAGTCTGGAGGACGAGTCTGAG
GAGGACGACAGCAATCCCGCTCCGCCGCTGGACAGTGGGAAAAAGGACGC
CGAACCGGACTCGCCGCCTTCAAAATTCCACAGCATACGCAAGCGCTTCG
ACGATGACGTGGTCGAGTCGAAGTTCTCGCCCGTTAAGCGTCCCACCTTT
AGCAAATCATTTGGCAAATTGGGCATTGGCCTGGCCACCAAAGCCGAGGC
GGATATCAAGAAGGAGCCACCGCCGGTGGACACCAAAAAGGAGATCAAAA
AGAAGCCCGAACCAGTAGCGGCCAAAATGGAGATCGTTGAAGAGCCCACC
GTCGCAGCAGGGGAGAAGACCAAGAAGGAGCCGGAACAGCCGCATGTGGG
TGCTAAATCGGAGCCGGAAGTGGAAGACAAGCCGCAACCCGAAGCCGAGC
CAGAAGACGAAATCGATCCACTGGATGCCTACATGCAGGAGGTCAACAAC
GAGATGCGGCGTGTGAACAATTTTGTCAATCCACCCGCCAAATCGCAGGG
TGTCGTGATCCTCACGGGAGTGGCCAAAAAGAAGACGACGACGTTGAAGA
AGGGCGAGGTGATAGAACAAAATATGGACAGCTTGGAGTACTCTAGCGAG
GACGAACTGGAGGACATACGTGACACGGCCGTTAATCTGGCGATGAAGCA
CCGCAAGGAGCTGGCCAAGATTGATCATTCCTCGGTTACGTATGCGCCCT
TCCGCAAGAACTTCTATGTCGAGGTGCCGGAACTGACTCGCATGACGGCC
GCCGATGTGGAGAAGTACCGCTCCGACCTTGAGGGCATCCAGGTTAAGGG
CAAGGGCTGTCCAAAGCCCATTAAGACTTGGGCACAGTGCGGCGTCAGCA
AGAAAGAGATGGAAGTGCTGCGACGGCTGGGCTTCGAGAAGCCCACGCCC
ATCCAGTGCCAGGCCATACCGGCCATCATGTCCGGACGGGATCTGATAGG
TATTGCTAAAACTGGCAGTGGCAAGACGTTGGCATTCATTTTACCAATGT
TTAGGCATATTTTGGACCAGCCGAGCATGGAGGATGGCGACGGCGCTATC
GCTATCATTATGGCGCCAACTCGCGAACTCTGCATGCAGATCGGCAAGGA
CATCCGCAAGTTTAGCAAGTCGCTCGGCCTGCGGCCAGTTTGTGTGTACG
GCGGCACGGGGATCTCTGAGCAAATTGCCGAGCTGAAGCGTGGCGCCGAG
ATAATTGTATGCACGCCTGGCCGCATGATCGACATGCTGGCGGCGAATTC
TGGACGTGTGACGAACCTGCGTCGCGTCACCTATGTCGTCTTGGACGAGG
CAGATCGCATGTTCGACATGGGCTTCGAGCCGCAGGTGATGCGCATCATC
GATAACGTGCGACCGGATCGCCAGACGGTCATGTTTAGCGCTACGTTTCC
ACGGCAAATGGAGGCGTTAGCCAGACGCATACTTAAGAAACCCATCGAGG
TGATCGTCGGCGGTCGGTCGGTGGTGTGCAAAGAAGTCGAACAGCACGTA
GTCATTCTCAACGACGATGCCAAGTTCTTCAAGCTGTTGGAGCTGCTAGG
CATATACCAGGAGGCGGGCAGCATCATTGTGTTTGTCGATAAGCAGGAGA
ACGCTGACATCCTGCTGCGCGACCTTATGAAGGCATCGTATCCGTGCATG
AGCCTGCACGGCGGCATCGATCAGTTCGATCGCGACTCCACCATTATCGA
CTTCAAGTCGGGCAAGGTGCGCCTACTGATTGCCACCTCGGTGGCGGCGC
GCGGTTTGGATGTTAAGGATCTCATACTGGTGGTCAACTACGATGTGCCC
AACCACTACGAGGACTATGTTCACAGATGTGGTCGCACCGGTCGAGCGGG
CAAAAAGGGCAGCGCCTACACGTTTATCACACCGGAGCAATCGCGCTATG
CCGGCGACATTATCCGCGCCATGGACCTATCAGGCACACTGATTCCCGCC
GAGCTGCAGGCACTGTGGACGGAGTATAAGGCGCTCCAGGAGGCCGAGGG
CAAGACGGTGCACACGGGCGGCGGCTTTAGCGGCAAGGGCTTCAAGTTCG
ACGAGCAGGAGTTCAATGCCGCCAAGGAGAGCAAGAAGCTGCAGAAGGCG
GCCTTGGGACTGGCCGATTCCGATGATGAGGAGGACATCGAGCAGGATAT
TGACCAGCAGATTGAGCAAATCTTTGCGGCCAAGCGCACGGTTAAGGATA
CATCGGCCGCGGCCACAGCCGCGGCGGCAGCAGCTGCTGCGGCTGCAGCC
GCAGCTGCGGCAGTTTCTGGAGCTAATCCGGCACTGGCCTCGGCGGCGGC
TCAAGCGGCGGCAGCTGCGGCTGCTGCCAATATTGCCATTGCTGCGGCTT
CGGCGCCCGCAGCCGCGGGTGGAGCTCCAAGTGTGGCCATGGGCGGTGCT
CTAAGCTCTGATAAGCTGGAGCTAGCCAAACGATTGGCCTCCAAGATCAA
CAGCAGCAAGAACCTGGACACCAAGGGCAGCGTGGTCACTGTGGAGCCCA
TGATCAAGGGACCGCATGTCACGGGAGCTGCCGCGACCCTGCTGACCGCT
CGCACGGTGGCCGAGCAGATGGCCGCCAAGTTGAACAACAAACTGAACTA
TCAGCCCAAAGAGGATGAGGAAGGACTGGGCCCGCTGGTGGGTGGCACAA
CCAACCCGTTTACCAAATACGAGGAGGAACTGGAGATTAACGATTTCCCG
CAGCAAGCGCGATGGAAGGTCACGTCCAAGGAGGCACTCGCTCAGATCTC
TGAGTACTCGGAGGCAGGTCTCACCGTACGTGGCACATATGTGCCGCAGG
GCAAGAATCCGCCGGATGGCGAGCGCAAACTCTACCTCGCCATCGAGAGC
TGCAGTGAACTGGCCGTGCAGAAGGCCAAGCGCGAGATCACGCGGCTAAT
CAAGGAGGAGCTGCTCAAGCTCAGCTCCGCTCATCATGTCTTTAACAAGG
GTCGCTACAAGGTGGTCTAGACCTAGATCTAGATCCCCCACCAATCCTCT
CGCTATGCTAAGATATTCTAATGTTCTTTAGAGCGCGATCAGATAGGCAT
AAGGATTAGTTTGTGAGCATTTGAAGCAGGACAAATGCCCAAACAGATTT
ATCTTAATAAATTTATTGGATACAAAAAAAAAAAAAAAAAA

LD41277.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:57:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG6227-RA 4455 CG6227-RA 153..4176 1..4024 20120 100 Plus
CG6227-RA 4455 CG6227-RA 4205..4362 3867..4024 625 93 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:41:10
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 15238471..15239772 2722..4023 6510 100 Plus
chrX 22417052 chrX 15236035..15237271 489..1725 6185 100 Plus
chrX 22417052 chrX 15237411..15238413 1724..2726 5015 100 Plus
chrX 22417052 chrX 15235424..15235700 212..488 1385 100 Plus
chrX 22417052 chrX 15235148..15235360 1..213 1065 100 Plus
chrX 22417052 chrX 15239802..15239958 3867..4023 620 93 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:36:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:41:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15348534..15349836 2722..4024 6515 100 Plus
X 23542271 X 15346098..15347334 489..1725 6185 100 Plus
X 23542271 X 15347474..15348476 1724..2726 5015 100 Plus
X 23542271 X 15345487..15345763 212..488 1385 100 Plus
X 23542271 X 15345211..15345423 1..213 1065 100 Plus
X 23542271 X 15349865..15350022 3867..4024 625 93 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:46:27
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 15356632..15357934 2722..4024 6515 100 Plus
X 23527363 X 15354196..15355432 489..1725 6185 100 Plus
X 23527363 X 15355572..15356574 1724..2726 5015 100 Plus
X 23527363 X 15353585..15353861 212..488 1385 100 Plus
X 23527363 X 15353309..15353521 1..213 1065 100 Plus
X 23527363 X 15357963..15358120 3867..4024 625 93 Plus
Blast to na_te.dros performed 2019-03-16 20:41:08
Subject Length Description Subject Range Query Range Score Percent Strand
TART-A 13424 TART-A 13424bp 10445..10581 3120..3253 129 58.3 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 6029..6094 3281..3216 123 65.2 Minus

LD41277.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:42:07 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 15235148..15235360 1..213 100 == Plus
chrX 15235509..15235700 297..488 100 -> Plus
chrX 15236035..15236098 489..552 100 == Plus
chrX 15236167..15237271 621..1725 100 -> Plus
chrX 15237413..15238413 1726..2726 100 -> Plus
chrX 15238476..15238852 2727..3103 100 == Plus
chrX 15238977..15239772 3228..4023 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:23:42 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
CG6227-RA 1..3675 196..3870 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:31:44 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
CG6227-RA 1..3675 196..3870 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:26:11 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
CG6227-RA 1..3675 196..3870 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:15:34 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
CG6227-RA 1..3675 196..3870 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:10:37 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
CG6227-RA 1..3675 196..3870 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:36:38 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
CG6227-RA 93..4115 1..4023 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:31:44 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
CG6227-RA 93..4115 1..4023 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:26:11 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
CG6227-RA 43..4065 1..4023 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:15:34 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
CG6227-RA 93..4115 1..4023 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:10:37 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
CG6227-RA 43..4065 1..4023 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:42:07 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
X 15345211..15345422 1..212 100 -> Plus
X 15345488..15345763 213..488 100 -> Plus
X 15346098..15347334 489..1725 100 -> Plus
X 15347476..15348476 1726..2726 100 -> Plus
X 15348539..15349835 2727..4023 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:42:07 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
X 15345211..15345422 1..212 100 -> Plus
X 15345488..15345763 213..488 100 -> Plus
X 15346098..15347334 489..1725 100 -> Plus
X 15347476..15348476 1726..2726 100 -> Plus
X 15348539..15349835 2727..4023 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:42:07 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
X 15345211..15345422 1..212 100 -> Plus
X 15345488..15345763 213..488 100 -> Plus
X 15346098..15347334 489..1725 100 -> Plus
X 15347476..15348476 1726..2726 100 -> Plus
X 15348539..15349835 2727..4023 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:26:11 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15239244..15239455 1..212 100 -> Plus
arm_X 15239521..15239796 213..488 100 -> Plus
arm_X 15240131..15241367 489..1725 100 -> Plus
arm_X 15241509..15242509 1726..2726 100 -> Plus
arm_X 15242572..15243868 2727..4023 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:52:30 Download gff for LD41277.complete
Subject Subject Range Query Range Percent Splice Strand
X 15353586..15353861 213..488 100 -> Plus
X 15353309..15353520 1..212 100 -> Plus
X 15354196..15355432 489..1725 100 -> Plus
X 15355574..15356574 1726..2726 100 -> Plus
X 15356637..15357933 2727..4023 100   Plus

LD41277.pep Sequence

Translation from 195 to 3869

> LD41277.pep
MSKSSGRDRDRERDRERERERDRERERDRDRERDNRHDSRSRDYDMGKSR
NGGGGGAGGGSRNMREDRKRGKDMISDRGKRDDKRRKCSRSKDYEKDNSP
HYRRLDKDRDRDRDRDRQREKEREREKEKEREKEKERERDKDRERDRQRE
KESDSRRAAAAAPLIIPLLSTSCSEEEVEEIDKEEQQRRLEQEMIKRRER
IERWRAERKRDTKAAVVAPSLVNSAKKWSLEDESEEDDSNPAPPLDSGKK
DAEPDSPPSKFHSIRKRFDDDVVESKFSPVKRPTFSKSFGKLGIGLATKA
EADIKKEPPPVDTKKEIKKKPEPVAAKMEIVEEPTVAAGEKTKKEPEQPH
VGAKSEPEVEDKPQPEAEPEDEIDPLDAYMQEVNNEMRRVNNFVNPPAKS
QGVVILTGVAKKKTTTLKKGEVIEQNMDSLEYSSEDELEDIRDTAVNLAM
KHRKELAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQV
KGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDL
IGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIG
KDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAA
NSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSAT
FPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLEL
LGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTI
IDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGR
AGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEA
EGKTVHTGGGFSGKGFKFDEQEFNAAKESKKLQKAALGLADSDDEEDIEQ
DIDQQIEQIFAAKRTVKDTSAAATAAAAAAAAAAAAAAAVSGANPALASA
AAQAAAAAAAANIAIAAASAPAAAGGAPSVAMGGALSSDKLELAKRLASK
INSSKNLDTKGSVVTVEPMIKGPHVTGAAATLLTARTVAEQMAAKLNNKL
NYQPKEDEEGLGPLVGGTTNPFTKYEEELEINDFPQQARWKVTSKEALAQ
ISEYSEAGLTVRGTYVPQGKNPPDGERKLYLAIESCSELAVQKAKREITR
LIKEELLKLSSAHHVFNKGRYKVV*

LD41277.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:57:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21236-PA 1211 GF21236-PA 166..1211 159..1224 4328 86 Plus
Dana\GF23818-PA 795 GF23818-PA 212..676 456..915 1030 42.4 Plus
Dana\GF10884-PA 822 GF10884-PA 93..517 451..876 911 42.2 Plus
Dana\GF18634-PA 704 GF18634-PA 219..634 459..876 892 42.6 Plus
Dana\GF16725-PA 693 GF16725-PA 214..655 468..899 889 42.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:57:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17877-PA 1222 GG17877-PA 35..1222 35..1224 5084 90.6 Plus
Dere\GG13958-PA 786 GG13958-PA 121..674 364..911 1044 39.2 Plus
Dere\GG15018-PA 824 GG15018-PA 99..523 451..876 916 42.4 Plus
Dere\GG10666-PA 720 GG10666-PA 234..649 459..876 905 43 Plus
Dere\GG23261-PA 709 GG23261-PA 236..677 468..899 890 41.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:57:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17577-PA 1302 GH17577-PA 441..1302 378..1224 3713 82.6 Plus
Dgri\GH17046-PA 811 GH17046-PA 239..707 456..926 1028 42.6 Plus
Dgri\GH23229-PA 649 GH23229-PA 239..642 456..862 981 45.6 Plus
Dgri\GH24775-PA 977 GH24775-PA 167..613 427..877 922 41 Plus
Dgri\GH22580-PA 793 GH22580-PA 84..512 447..876 898 41.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:09:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG6227-PA 1224 CG6227-PA 1..1224 1..1224 6219 100 Plus
CG6418-PB 791 CG6418-PB 98..680 340..915 1041 38.1 Plus
CG7878-PA 703 CG7878-PA 230..687 468..918 914 41.5 Plus
CG10077-PD 818 CG10077-PD 100..573 452..913 887 39.3 Plus
CG10077-PA 818 CG10077-PA 100..573 452..913 887 39.3 Plus
Rm62-PH 575 CG10279-PH 90..549 459..917 883 41.2 Plus
Rm62-PD 575 CG10279-PD 90..549 459..917 883 41.2 Plus
Rm62-PI 578 CG10279-PI 93..552 459..917 883 41.2 Plus
Rm62-PF 578 CG10279-PF 93..552 459..917 883 41.2 Plus
Rm62-PE 578 CG10279-PE 93..552 459..917 883 41.2 Plus
Rm62-PB 578 CG10279-PB 93..552 459..917 883 41.2 Plus
Rm62-PC 578 CG10279-PC 93..552 459..917 883 41.2 Plus
Rm62-PA 719 CG10279-PA 234..693 459..917 883 41.2 Plus
CG10333-PA 822 CG10333-PA 3..788 82..879 879 30.3 Plus
mahe-PC 945 CG10777-PC 196..614 468..880 850 43.3 Plus
mahe-PB 945 CG10777-PB 196..614 468..880 850 43.3 Plus
Rm62-PK 485 CG10279-PK 90..451 459..822 747 43.6 Plus
Rm62-PL 473 CG10279-PL 90..451 459..822 743 43.4 Plus
Rm62-PM 478 CG10279-PM 90..451 459..822 743 43.4 Plus
Rm62-PJ 458 CG10279-PJ 90..450 459..821 741 43.5 Plus
vas-PC 661 CG46283-PC 233..658 498..922 741 38.5 Plus
vas-PB 661 CG46283-PB 233..658 498..922 741 38.5 Plus
vas-PA 661 CG46283-PA 233..658 498..922 741 38.5 Plus
CG10077-PC 472 CG10077-PC 100..468 452..821 729 41 Plus
bel-PA 798 CG9748-PA 271..722 484..917 667 34.4 Plus
bel-PB 801 CG9748-PB 271..722 484..917 667 34.4 Plus
abs-PA 619 CG14637-PA 97..539 425..866 660 35.3 Plus
CG9253-PA 507 CG9253-PA 62..482 511..931 560 33.3 Plus
CG7483-PA 399 CG7483-PA 10..380 494..872 526 32.6 Plus
CG32344-PA 827 CG32344-PA 5..396 476..872 521 31.2 Plus
eIF4A-PF 403 CG9075-PF 40..402 523..890 518 32.7 Plus
eIF4A-PE 403 CG9075-PE 40..402 523..890 518 32.7 Plus
eIF4A-PD 403 CG9075-PD 40..402 523..890 518 32.7 Plus
eIF4A-PB 403 CG9075-PB 40..402 523..890 518 32.7 Plus
eIF4A-PC 403 CG9075-PC 40..402 523..890 518 32.7 Plus
eIF4A-PA 403 CG9075-PA 40..402 523..890 518 32.7 Plus
Rs1-PB 782 CG2173-PB 156..535 509..887 486 32.9 Plus
Rs1-PA 782 CG2173-PA 156..535 509..887 486 32.9 Plus
Hel25E-PB 424 CG7269-PB 51..415 523..887 478 31.6 Plus
Hel25E-PA 424 CG7269-PA 51..415 523..887 478 31.6 Plus
Hel25E-PC 424 CG7269-PC 51..415 523..887 478 31.6 Plus
CG5589-PA 594 CG5589-PA 84..508 479..903 478 30.2 Plus
CG5800-PA 826 CG5800-PA 71..445 509..868 471 33.3 Plus
me31B-PB 428 CG4916-PB 46..371 529..864 466 32.1 Plus
me31B-PA 459 CG4916-PA 77..402 529..864 466 32.1 Plus
Dbp45A-PA 521 CG12759-PA 22..349 525..855 451 34.7 Plus
CG14443-PB 736 CG14443-PB 273..670 452..849 444 27.9 Plus
pit-PC 680 CG6375-PC 26..542 299..865 443 27.2 Plus
pit-PA 680 CG6375-PA 26..542 299..865 443 27.2 Plus
pit-PB 680 CG6375-PB 26..542 299..865 443 27.2 Plus
CG9630-PA 613 CG9630-PA 14..378 517..868 436 32.4 Plus
CG10333-PA 822 CG10333-PA 26..239 7..207 162 31.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:57:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15175-PA 1229 GI15175-PA 160..1229 154..1224 4131 78 Plus
Dmoj\GI12051-PA 797 GI12051-PA 104..683 343..917 1040 38 Plus
Dmoj\GI14822-PA 963 GI14822-PA 194..619 467..887 925 43.5 Plus
Dmoj\GI12369-PA 794 GI12369-PA 81..547 447..914 910 39.6 Plus
Dmoj\GI12524-PA 602 GI12524-PA 57..491 456..890 896 42 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:57:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14575-PA 1243 GL14575-PA 1..1243 1..1224 4258 77.2 Plus
Dper\GL21821-PA 812 GL21821-PA 98..682 340..911 1036 37.1 Plus
Dper\GL23489-PA 649 GL23489-PA 158..573 459..876 875 41.8 Plus
Dper\GL16096-PA 554 GL16096-PA 57..502 462..890 867 41.9 Plus
Dper\GL15249-PA 688 GL15249-PA 1..363 525..880 829 45.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:57:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19457-PA 1243 GA19457-PA 1..1243 1..1224 4243 77.1 Plus
Dpse\GA19578-PA 812 GA19578-PA 98..682 340..911 1034 37.1 Plus
Dpse\GA10556-PA 939 GA10556-PA 197..615 468..880 917 43.5 Plus
Dpse\GA28589-PA 799 GA28589-PA 80..508 447..876 905 41.8 Plus
Dpse\GA28491-PA 537 GA28491-PA 57..485 462..890 891 43.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:57:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20179-PA 1214 GM20179-PA 1..1214 1..1224 6249 97.1 Plus
Dsec\GM24798-PA 786 GM24798-PA 130..673 374..911 1054 40 Plus
Dsec\GM23704-PA 699 GM23704-PA 221..662 468..899 907 42.1 Plus
Dsec\GM10578-PA 724 GM10578-PA 238..653 459..876 901 42.8 Plus
Dsec\GM11962-PA 946 GM11962-PA 197..615 468..880 897 42.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:57:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17208-PA 474 GD17208-PA 95..474 844..1224 1934 98.2 Plus
Dsim\GD17585-PA 786 GD17585-PA 213..673 456..911 1054 44.1 Plus
Dsim\GD18514-PA 713 GD18514-PA 235..676 468..899 907 41.8 Plus
Dsim\GD13105-PA 814 GD13105-PA 99..520 451..876 904 42.7 Plus
Dsim\GD16140-PA 800 GD16140-PA 197..615 468..880 895 42.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:57:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17053-PA 1244 GJ17053-PA 161..1244 154..1224 4200 77.7 Plus
Dvir\GJ13322-PA 797 GJ13322-PA 103..687 340..917 1034 36.6 Plus
Dvir\GJ19487-PA 953 GJ19487-PA 165..615 427..880 920 40.9 Plus
Dvir\GJ12262-PA 778 GJ12262-PA 80..508 447..876 904 41.6 Plus
Dvir\GJ16043-PA 605 GJ16043-PA 69..503 456..890 887 41.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:57:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20023-PA 1234 GK20023-PA 37..1234 38..1224 3922 70 Plus
Dwil\GK13754-PA 839 GK13754-PA 248..712 456..915 1039 44.1 Plus
Dwil\GK12550-PA 800 GK12550-PA 77..500 452..876 918 42.8 Plus
Dwil\GK16276-PA 950 GK16276-PA 199..619 467..880 906 42.8 Plus
Dwil\GK14214-PA 745 GK14214-PA 257..672 459..876 896 42.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17181-PA 1215 GE17181-PA 35..1215 35..1224 5257 93.6 Plus
Dyak\GE20258-PA 789 GE20258-PA 216..676 456..911 1045 43.7 Plus
Dyak\GE20460-PA 818 GE20460-PA 98..522 451..876 915 42.4 Plus
Dyak\GE24123-PA 719 GE24123-PA 236..651 459..876 898 42.8 Plus
Dyak\GE25850-PA 688 GE25850-PA 215..656 468..899 894 41.8 Plus

LD41277.hyp Sequence

Translation from 195 to 3869

> LD41277.hyp
MSKSSGRDRDRERDRERERERDRERERDRDRERDNRHDSRSRDYDMGKSR
NGGGGGAGGGSRNMREDRKRGKDMISDRGKRDDKRRKCSRSKDYEKDNSP
HYRRLDKDRDRDRDRDRQREKEREREKEKEREKEKERERDKDRERDRQRE
KESDSRRAAAAAPLIIPLLSTSCSEEEVEEIDKEEQQRRLEQEMIKRRER
IERWRAERKRDTKAAVVAPSLVNSAKKWSLEDESEEDDSNPAPPLDSGKK
DAEPDSPPSKFHSIRKRFDDDVVESKFSPVKRPTFSKSFGKLGIGLATKA
EADIKKEPPPVDTKKEIKKKPEPVAAKMEIVEEPTVAAGEKTKKEPEQPH
VGAKSEPEVEDKPQPEAEPEDEIDPLDAYMQEVNNEMRRVNNFVNPPAKS
QGVVILTGVAKKKTTTLKKGEVIEQNMDSLEYSSEDELEDIRDTAVNLAM
KHRKELAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQV
KGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDL
IGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIG
KDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAA
NSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSAT
FPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLEL
LGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTI
IDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGR
AGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEA
EGKTVHTGGGFSGKGFKFDEQEFNAAKESKKLQKAALGLADSDDEEDIEQ
DIDQQIEQIFAAKRTVKDTSAAATAAAAAAAAAAAAAAAVSGANPALASA
AAQAAAAAAAANIAIAAASAPAAAGGAPSVAMGGALSSDKLELAKRLASK
INSSKNLDTKGSVVTVEPMIKGPHVTGAAATLLTARTVAEQMAAKLNNKL
NYQPKEDEEGLGPLVGGTTNPFTKYEEELEINDFPQQARWKVTSKEALAQ
ISEYSEAGLTVRGTYVPQGKNPPDGERKLYLAIESCSELAVQKAKREITR
LIKEELLKLSSAHHVFNKGRYKVV*

LD41277.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:23:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG6227-PA 1224 CG6227-PA 1..1224 1..1224 6219 100 Plus
CG6418-PB 791 CG6418-PB 98..680 340..915 1041 38.1 Plus
CG7878-PA 703 CG7878-PA 230..687 468..918 914 41.5 Plus
Rm62-PH 575 CG10279-PH 90..549 459..917 883 41.2 Plus
Rm62-PD 575 CG10279-PD 90..549 459..917 883 41.2 Plus