BDGP Sequence Production Resources |
Search the DGRC for LD41392
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 413 |
Well: | 92 |
Vector: | pOT2 |
Associated Gene/Transcript | Ppox-RA |
Protein status: | LD41392.pep: gold |
Preliminary Size: | 1796 |
Sequenced Size: | 1656 |
Gene | Date | Evidence |
---|---|---|
CG5796 | 2001-01-01 | Release 2 assignment |
CG5796 | 2001-07-04 | Blastp of sequenced clone |
CG5796 | 2003-01-01 | Sim4 clustering to Release 3 |
Ppox | 2008-04-29 | Release 5.5 accounting |
Ppox | 2008-08-15 | Release 5.9 accounting |
Ppox | 2008-12-18 | 5.12 accounting |
1656 bp (1656 high quality bases) assembled on 2001-07-04
GenBank Submission: AY058695
> LD41392.complete AACGATCGAAGCCGGCATAGATTTTTTCGTCTGCAAACCAGAACTAGTCT GAATCCTCTAAGGGATTCGGGAGCAACGAGAAGCAGCAGAAGGACCATGA CGACGGCCGTGCTGGGAGGCGGATTGAGTGGACTATCCGCCGGATACTAC CTGTTGCGGCGATTCGGGAAGCCGCTGACCATCTACGAGGCCTCGCCCCG TGTGGGCGGATGGGTGCGGTCGGAGAATCGCAAGGATCGCAACTTCATCT TCGAGAGCGGACCGCGAACCATACGCCCAGTTGGTGAGCCAGGTGCCAAT ACGCTAGAATTGGTGGAGGATCTGAAGCTGGAGGTGACTCCCATTCGACG CAGTCATGTCGCAGCACGCAACCGAATGCTGTATGCCAAGGGACAGCTCT GCATGCTGCCCAACAGTCCCAAGGGTCTCTTCGGCGTCCTGCCTCCCTTC ACGAAGCCGCTATACAAAGCGGTTCTTCGCGATCTGTTCACAGCAAGCAA GAAAGCGAAGCTGGAGGATGAGAGCATCTACAGTTTCGCTGAGCGGCGGT TTGGTAAGGAGATAGCCGACTACGCCATCAGTCCCATGATCTGCGGTATT TGCGCCGGTGACGCGCGAGAAATAAGTGTGCGCTTCCTGATGGAGGGGCT CTTTGAAAAGGAACAGAAGTACGGAGGAGTGCTCAAGGGCACACTCATTT CCCGCTTTGAGAAGAACAAGACCAAGGACACCAAGGATGGACTATTTGCC GAAAGACAGCCCAAGCTGTATGCGCAGGCGGTAAAGGAGAAGTGGGCCAT GTACGGGCTGAAAGGCGGTCTGGAGAACCTACCCAAAACTATGCGAAAGT ACTTAGGTGAGCGGGATGTGAACGTGCAGCTAAGCAACGAATGCCGGAAC CTGACCTTCAGCAGCTCCGGGGTTCGAATGAACATCAAGGATGCCGAAGT TCCGGTGGAGCATGTGGTCAGCTCCCTGCCCGCCTACAAACTCGCGCCCC TGGTAAAGCAGCAGCATCCCTCGCTGAGCGCCCAACTTTTGAGCATTCCG TACGTGGATGTGCTGGTAGTGAACATGCAGTTCCCCGGCAAGCTACTCAA ACAAGACGGCTTTGGATTGCTAGTGCCGCCAGTGGAAAAGTTACCTCTGC TCGGCGTCATCTTCGACAGCTGCTGCTTCGACATGGGCGAGAACACTGTG CTTACCGTGATGATGGGTGGCCATTGGTTCGACCAGTGGTTCGGTGATCG TCCAAGCCCCAAGCAGATTCTTGACTTAGCCACCAGCCATGTGCAGAAAA TGCTGCAGATACGCGAGGAACCCAAATTCAGTCGAGTGCACACGCTGCAC AAGTGCATCCCGCAGTACACTGTGGGCCACAAGCGGCGCGTTGAAGCCAT TCGGAACTACATCAAGACCTACAAACTGCCACTGTCTGTCTGTGGAGCTG CATACGATGGCGTGGGCATCAACGATGTTATCCTATCCGCCCGGCGACAA GTGGAAGCCATACCCTTGTCCTAAATCAACCATTCCCTTCTAGCACACCC TCTTTTCCATTGGTGATTCTGTTGTATTTGCGTAAGCTGGTTTTGTGAAT AGTAAAGTAGGTCCTTTGTACATAGAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20483445..20485069 | 1625..1 | 8125 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24660195..24661821 | 1627..1 | 8135 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24401026..24402652 | 1627..1 | 8135 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20483445..20485069 | 1..1625 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppox-RA | 1..1428 | 97..1524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppox-RA | 1..1428 | 97..1524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppox-RA | 1..1428 | 97..1524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppox-RA | 1..1428 | 97..1524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppox-RA | 1..1428 | 97..1524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppox-RA | 31..1655 | 1..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppox-RA | 31..1655 | 1..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppox-RA | 31..1655 | 1..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppox-RA | 31..1655 | 1..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppox-RA | 31..1655 | 1..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24660197..24661821 | 1..1625 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24660197..24661821 | 1..1625 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24660197..24661821 | 1..1625 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20485919..20487543 | 1..1625 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24401028..24402652 | 1..1625 | 100 | Minus |
Translation from 0 to 1523
> LD41392.hyp NDRSRHRFFRLQTRTSLNPLRDSGATRSSRRTMTTAVLGGGLSGLSAGYY LLRRFGKPLTIYEASPRVGGWVRSENRKDRNFIFESGPRTIRPVGEPGAN TLELVEDLKLEVTPIRRSHVAARNRMLYAKGQLCMLPNSPKGLFGVLPPF TKPLYKAVLRDLFTASKKAKLEDESIYSFAERRFGKEIADYAISPMICGI CAGDAREISVRFLMEGLFEKEQKYGGVLKGTLISRFEKNKTKDTKDGLFA ERQPKLYAQAVKEKWAMYGLKGGLENLPKTMRKYLGERDVNVQLSNECRN LTFSSSGVRMNIKDAEVPVEHVVSSLPAYKLAPLVKQQHPSLSAQLLSIP YVDVLVVNMQFPGKLLKQDGFGLLVPPVEKLPLLGVIFDSCCFDMGENTV LTVMMGGHWFDQWFGDRPSPKQILDLATSHVQKMLQIREEPKFSRVHTLH KCIPQYTVGHKRRVEAIRNYIKTYKLPLSVCGAAYDGVGINDVILSARRQ VEAIPLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ppox-PA | 475 | CG5796-PA | 1..475 | 33..507 | 2469 | 100 | Plus |
Translation from 96 to 1523
> LD41392.pep MTTAVLGGGLSGLSAGYYLLRRFGKPLTIYEASPRVGGWVRSENRKDRNF IFESGPRTIRPVGEPGANTLELVEDLKLEVTPIRRSHVAARNRMLYAKGQ LCMLPNSPKGLFGVLPPFTKPLYKAVLRDLFTASKKAKLEDESIYSFAER RFGKEIADYAISPMICGICAGDAREISVRFLMEGLFEKEQKYGGVLKGTL ISRFEKNKTKDTKDGLFAERQPKLYAQAVKEKWAMYGLKGGLENLPKTMR KYLGERDVNVQLSNECRNLTFSSSGVRMNIKDAEVPVEHVVSSLPAYKLA PLVKQQHPSLSAQLLSIPYVDVLVVNMQFPGKLLKQDGFGLLVPPVEKLP LLGVIFDSCCFDMGENTVLTVMMGGHWFDQWFGDRPSPKQILDLATSHVQ KMLQIREEPKFSRVHTLHKCIPQYTVGHKRRVEAIRNYIKTYKLPLSVCG AAYDGVGINDVILSARRQVEAIPLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17757-PA | 474 | GF17757-PA | 1..474 | 1..475 | 2143 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12328-PA | 475 | GG12328-PA | 1..475 | 1..475 | 2479 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19131-PA | 480 | GH19131-PA | 3..476 | 2..474 | 1939 | 75.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ppox-PA | 475 | CG5796-PA | 1..475 | 1..475 | 2469 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23588-PA | 478 | GI23588-PA | 1..473 | 1..473 | 1939 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13869-PA | 472 | GL13869-PA | 1..472 | 1..473 | 1934 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19136-PA | 472 | GA19136-PA | 1..472 | 1..473 | 1960 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23469-PA | 475 | GM23469-PA | 1..475 | 1..475 | 2505 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18277-PA | 573 | GD18277-PA | 99..573 | 1..475 | 2507 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23564-PA | 481 | GJ23564-PA | 1..474 | 1..474 | 1951 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12118-PA | 479 | GK12118-PA | 1..474 | 1..475 | 1980 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10782-PA | 475 | GE10782-PA | 1..475 | 1..475 | 2490 | 98.1 | Plus |