BDGP Sequence Production Resources |
Search the DGRC for LD41491
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 414 |
Well: | 91 |
Vector: | pOT2 |
Associated Gene/Transcript | Pex3-RA |
Protein status: | LD41491.pep: gold |
Preliminary Size: | 1607 |
Sequenced Size: | 1567 |
Gene | Date | Evidence |
---|---|---|
CG6859 | 2001-01-01 | Release 2 assignment |
CG6859 | 2001-07-04 | Blastp of sequenced clone |
CG6859 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6859 | 2008-04-29 | Release 5.5 accounting |
CG6859 | 2008-08-15 | Release 5.9 accounting |
CG6859 | 2008-12-18 | 5.12 accounting |
1567 bp (1567 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051934
> LD41491.complete AAACAGACGACGCAGTATGCGGCACCAAACAGAGAAATAACACATTTAGC GACAACAACAAAGGATAAATCCATTCCATACATTCCAGAGCTAGATCCGA TCCAAAGGCCAGCAATCGACCCGATAAGGCGGCGCACCAGATCCGAGTTT CCGAGCAGGGGTATATAGGTCGCCGGTGGAGCGGGAAAAAGTGGGATATC TGAACAGCAGTTGGCCTATTTCACACAGGAAGCGGATTCTAGTTGTCCAT CCGGCAGAAGAGGCCTTTTCCAATCGTTAACATGCTGTCGCGCCTGCAGG ACTTCTTGTCACGCCACCGGCGAAAGTTCATAGTGACCGGCGTTCTGGTG GGCGGTACCATCTTTGCGGCACGTTATGCACAACGGCGATTCGTGGAGTT CCAGGAGAAACAGGCCAGGGAATTCTTCGAGAGAACGCGGCGCACGACCC ACTTTGAGTCGACGGAGAAGACGTGTAACCAGGTGATCCTAGGCATGGGC GAGGAGATGTGCCAAGCGGTTCTGAGGGAGTGCAGCACGGACGAGCTGCT CGAGCAGCTGCGCCAGAATCCCAAGAACAAGTTGGAACTTTGGGAGGACA TGAAAATTGTGGCATTCACAAGACTGGCAACCTATGTCTACGCCTCCTCC ATGCTGGTTATTGCGTTGAGGGTCCAGCTAAATCTTCTCGGTGGCTACAT CTATCGGGACATCATGACGGAACAAAAACAAGTCACCGACGAGCTAAAGC AGCAGTATCTCTCCCTCATCCGACACTTTATCACGGATTCGGGCATCCGG GACTTAGCCCGTTACATTCGCACCCAGGTCATCGCAGTCACCAAGACCAT ACCGCTCTCCGAACAGCTTTCCCTTAGCGACCTGGAGCAACTGTTTTGGT CACTGCAAATGGCCATCAATGCGGACACTCGTCGGGATCCCAACTCGCGA ATGAGCAAGTATCTGCTGCCCAGCCAGAATCCCAGTCATTCGCCGCTGCT GCAAAAGATGGTCAACGAGACGCTGGATCTGTTGGAGAGCGAGGATGCCG TTGGCGTGTGCTCGCACAATGTAAGCCGTGGTTTTGTGCTGGCCTGCGAT GCCATCGCCGAAAGCATGGGCGAAACTTTGCAGCATCTGCCACAAGCTAA AGTCCAAACGCAGCAAGAACAGAGCGTCAAGTTTAACCAGGCAGGAAGCT TAGGCGCCAGCACCTCGAAGAGCCAAAACGGTCTGGAGAACAATAACTTG CTGAACATCAACCGAGTGCTGTTGGCGTTGGCAAAGCTCATTCCTATCAT CAGTGGTCTCACCTCGAGAGGCTTCGATACCACTTCGCGACCCCACAATC TGCCCACCCAACTGCTAACCTTCTACGTGGTCGCCGAGAAGACAAAGACG CTGGGGGCCAACGTCTACGAAAGCTTTAGCTCCGCTTAGAGGATCAACAA AACTTGGATTATGCATCCGTGCATAGGCTAGGCTAAGACAATTGGAAAAT TATAGTTTATATACTTGTATATTTTTAATAAGATCTGTATTCTCAGAAAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6859-RA | 1943 | CG6859-RA | 65..1612 | 1..1548 | 7740 | 100 | Plus |
CG6859.c | 1858 | CG6859.c | 68..1529 | 87..1548 | 7310 | 100 | Plus |
CG6859.a | 1541 | CG6859.a | 163..1541 | 168..1546 | 6895 | 100 | Plus |
CG6859.a | 1541 | CG6859.a | 68..151 | 87..170 | 420 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
S-element | 1736 | S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). | 1540..1580 | 1490..1530 | 115 | 75.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15134443..15134610 | 1..168 | 98 | -> | Plus |
chr3L | 15134744..15136122 | 169..1546 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6859-RA | 1..1158 | 282..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6859-RA | 1..1158 | 282..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pex3-RA | 1..1158 | 282..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6859-RA | 1..1158 | 282..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pex3-RA | 1..1158 | 282..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6859-RA | 25..1570 | 1..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6859-RA | 25..1570 | 1..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pex3-RA | 14..1559 | 1..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6859-RA | 25..1570 | 1..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pex3-RA | 14..1559 | 1..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15144368..15144535 | 1..168 | 100 | -> | Plus |
3L | 15144669..15146046 | 169..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15144368..15144535 | 1..168 | 100 | -> | Plus |
3L | 15144669..15146046 | 169..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15144368..15144535 | 1..168 | 100 | -> | Plus |
3L | 15144669..15146046 | 169..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15137468..15137635 | 1..168 | 100 | -> | Plus |
arm_3L | 15137769..15139146 | 169..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15137468..15137635 | 1..168 | 100 | -> | Plus |
3L | 15137769..15139146 | 169..1546 | 100 | Plus |
Translation from 281 to 1438
> LD41491.pep MLSRLQDFLSRHRRKFIVTGVLVGGTIFAARYAQRRFVEFQEKQAREFFE RTRRTTHFESTEKTCNQVILGMGEEMCQAVLRECSTDELLEQLRQNPKNK LELWEDMKIVAFTRLATYVYASSMLVIALRVQLNLLGGYIYRDIMTEQKQ VTDELKQQYLSLIRHFITDSGIRDLARYIRTQVIAVTKTIPLSEQLSLSD LEQLFWSLQMAINADTRRDPNSRMSKYLLPSQNPSHSPLLQKMVNETLDL LESEDAVGVCSHNVSRGFVLACDAIAESMGETLQHLPQAKVQTQQEQSVK FNQAGSLGASTSKSQNGLENNNLLNINRVLLALAKLIPIISGLTSRGFDT TSRPHNLPTQLLTFYVVAEKTKTLGANVYESFSSA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23687-PA | 386 | GF23687-PA | 1..386 | 1..385 | 1785 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15881-PA | 385 | GG15881-PA | 1..385 | 1..385 | 1855 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14525-PA | 377 | GH14525-PA | 1..377 | 1..385 | 1502 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pex3-PB | 385 | CG6859-PB | 1..385 | 1..385 | 1933 | 100 | Plus |
Pex3-PA | 385 | CG6859-PA | 1..385 | 1..385 | 1933 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13098-PA | 376 | GI13098-PA | 1..376 | 1..385 | 1600 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24760-PA | 386 | GL24760-PA | 1..386 | 1..385 | 1629 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19910-PA | 386 | GA19910-PA | 1..386 | 1..385 | 1639 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25512-PA | 385 | GM25512-PA | 1..385 | 1..385 | 2004 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14527-PA | 385 | GD14527-PA | 1..385 | 1..385 | 2017 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13845-PA | 376 | GJ13845-PA | 1..376 | 1..385 | 1589 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20400-PA | 397 | GK20400-PA | 1..397 | 1..385 | 1638 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22224-PA | 385 | GE22224-PA | 1..385 | 1..385 | 1988 | 96.1 | Plus |
Translation from 281 to 1438
> LD41491.hyp MLSRLQDFLSRHRRKFIVTGVLVGGTIFAARYAQRRFVEFQEKQAREFFE RTRRTTHFESTEKTCNQVILGMGEEMCQAVLRECSTDELLEQLRQNPKNK LELWEDMKIVAFTRLATYVYASSMLVIALRVQLNLLGGYIYRDIMTEQKQ VTDELKQQYLSLIRHFITDSGIRDLARYIRTQVIAVTKTIPLSEQLSLSD LEQLFWSLQMAINADTRRDPNSRMSKYLLPSQNPSHSPLLQKMVNETLDL LESEDAVGVCSHNVSRGFVLACDAIAESMGETLQHLPQAKVQTQQEQSVK FNQAGSLGASTSKSQNGLENNNLLNINRVLLALAKLIPIISGLTSRGFDT TSRPHNLPTQLLTFYVVAEKTKTLGANVYESFSSA*