![]() | BDGP Sequence Production Resources |
Search the DGRC for LD41638
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 416 |
Well: | 38 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3309-RA |
Protein status: | LD41638.pep: gold |
Sequenced Size: | 2649 |
Gene | Date | Evidence |
---|---|---|
CG3309 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3309 | 2005-01-26 | Blastp of sequenced clone |
CG3309 | 2008-04-29 | Release 5.5 accounting |
CG3309 | 2008-08-15 | Release 5.9 accounting |
CG3309 | 2008-12-18 | 5.12 accounting |
2649 bp assembled on 2006-11-09
GenBank Submission: BT021379
> LD41638.complete CCTGATTCCCCTTGTCAATGTCGCTGGCAAATAAATAAATAAATATCAAC AAAATACAGAATGAGCGCGGATGCGAGAATCAAGCAGATGGCGCCATCGC TGGACACCACCGAACGGGAGAGGGAGCACCAGAACGTGGATGCCACCAAC TCGAACTCGGAGCCCAGTGCCAGCGATTGGGTGAACTTCTCGCAATGGAT GCACTGCTTCTGCGTGGTCACCTTCGATCTAAATCTTGGGCAGGCGCTGG AGCACGTCTATCCGCCGGCTTTCATGCCCAGCGACCAGGAGGTTAGCAAC ATTTGCTACATGGCCTTCCCGGACTCAAATTCCGGCTGCATGGGCGACAC CAAGTTCCACATGCGATTGCGCTGCACAACGCGTCGGGATTCCTTGCCGG GCTACAATGCGGAATGCTCGCCGGCGCTGCGACAGGATGGCTCCCACTAC TGGGGCTTCGTCTACTTTCGCCAGAAGCGGGACGCGAATCTGCCGCGTGG TTACTTCCAGAAGAGCTTTATAATCATTACACGACTGCCGTTCTTCAATC TGTACTACGACATACTCTCCCAGCTGGCGCCGCGCTACTTTGAGGAGGGC ACCGACGTCCTGCGTCTGGCCAGCGAGCAAATTAATCGCCAGTGGCCCGG CCTGCGAGTGGGTAAGCCGCTCCAGCTGCCTCTGCTGGATTGCAGCTATC AGATCTGCATACCGCGGACCAGCAGCAGTCGAAAGTCGACGGCCGATGGA GGCATCGCAGGTGGTGCGGTGGAATCGCCACCAGCCATGGCTGCTTGCCC GGCAGCCAAAGTGCTGGCCTCCGTTAATGAAATCGAACTCTTCCGCTCCC TGGACTTTGTCATGGAGCAACTGTACACGCTGTGGGAGCTGGTCATCACC GCCGAGCCCATTGTTGTCGTTGGCACCTCACCCGCCGACTGCTCCCACAT GGTGCAGACCCTTCTGGCCATGATTGCTCCGCTGGAGTATTGCGCCGAGG CGCGTCCCTACTTCACCATTCACGACAGCGAATTTCGCGAATTCACACAA GAGTGCAGCAGCAAGACCACACTGCCCGCCTGCATTTTGGGCGTCACGAA TCCGTTCTTTGTGAAGCTCCTGAAGGATTGGCCGCACATGCTGCGACTGG TGGACAACCAGAAGAACATGCAGCAGCAACAGCATCTGCTGCTGGGCCAA AAACACGCAAGGAACATCGCATCGGCCACATCATTTTCCAGTTCAACGGA ACTCGGTGGCCGTATAGCACTGAAATCGAACACCAATCTCAATGGCAGCT CCAGTTCCAGCAATGGCTCGGGCGATGCCTCGTCCGCGGGCCTGCACAGT AAATATAGGCCGTACCTGAAAAAGGACAAGGCGCTGATCAAAAAGGTGCT GCTGGGCATGAAGACCAAGCGGCCGGAGCATGTGCAAACCGCACTGATAC GACGCCATCTGCTCGAGCTGACGCAAAGCTTTATGATACCACTGGAACGG TATATGGCATCACTGATGCCGCTGCAAAAGGACATCAGTCCGTTTAAGTC GGCGCCGAATGCCAACAGCTTTAAGCTGGATGACTTTCTGGGCACGCTGG AAACCGCTGGGCCGCAGCTAACGTCGCCGCTGAAGGGCGACTGGAAGGGC CTGTACAGACGCTTCTTTCGATCGCCCAATTTTCGCGGCTGGTACGGTGC ACGTCATCGGGAGCTGCAGCTAACGCTGCAGGATCTACAGCTGCAGGCGC TATCCGTGGCGAATCTCGAGCACTGGGCGCACGACAAGCAGGAGGTGGAG ATCATCGATATGATACTCAAGCTCAAGCAAAAACTGAATCTCTATGGCGA CAAAGCCACGCAGCTGGAGGGCAACAATGGCTCAACTCAGCAGCAGATAC GCGCCCAGATTGAGTGCATGAAGGGCTTGCTGCCGCCGGATCTCAAGAAT GTGGTGAATCTTTGATGGTAGTAGCTCAATCCTCGTCCTCCTCCTTCTCT TCTGCCACTTATCACTTTGGCTGCTCCACATCTGTCTGCTAGTATCCTGT GATTGTGTGATTGTGCCTGGCGGTGCTCTTTATCAGTGTAAATAGATTTT AATCGGCGATTAGTCGCCGTATTTGTGTCTAGTTTAATTCTAAAGTGAAT CCAAGCGAAGCGATGAATGTTGTTAGTTCAAACTACAAGTCAAGTATTAA ATGTAATCGATGTGTCCCTTCCATATTTTCACATCCATGCGAAAACAATG CTCATGTCTCAAAATGTCGAAAACCATGCCAATAATATCTATGTGGCTGC AGCTTGAAACCACTAACCACAACATTGCAGTCCCTTCCTCTCCAGCTTTT TACTGATTGTGAATGGGAGTTGTGAAGCCAGTTGGTTATACCTTCAGTTT GTTTCTTTTAAAACCGTTGTGCAACTTTGTGTGTATATCGCTTAAATTGT TTATGTCAAATATAAGTTAACTATAATACATTAGCCAACAGCTGCAGCCT TTCCTTATGCCAACGTACATATTCCGTGGATTGCAATGGGAGTTCCAAAG TGTTTATTTTTTTTTTTATATAAATACAAAACAAAAATGACAACTTAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6743..6892 | 1155..1313 | 150 | 60.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6760..6861 | 1131..1233 | 132 | 64.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6802..6897 | 1140..1233 | 123 | 61.5 | Plus |
Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 5447..5599 | 2143..2289 | 119 | 58.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6798 | 1154..1233 | 117 | 67.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1078..1152 | 1154..1233 | 116 | 67.5 | Plus |
Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 1392..1440 | 2588..2541 | 116 | 73.5 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1087..1145 | 1131..1189 | 115 | 66.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 5220715..5221875 | 1..1161 | 99 | Minus | |
chrX | 5219224..5220655 | 1162..2596 | 97 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3309-RA | 1..1905 | 61..1965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3309-RA | 1..1905 | 61..1965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3309-RA | 1..1905 | 61..1965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3309-RA | 1..1905 | 61..1965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3309-RA | 1..1905 | 61..1965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3309-RA | 8..1972 | 1..1965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3309-RA | 22..2617 | 1..2596 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3309-RA | 22..2617 | 1..2596 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3309-RA | 8..1972 | 1..1965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3309-RA | 19..2614 | 1..2596 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5326675..5328109 | 1162..2596 | 100 | <- | Minus |
X | 5328169..5329329 | 1..1161 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5326675..5328109 | 1162..2596 | 100 | <- | Minus |
X | 5328169..5329329 | 1..1161 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5326675..5328109 | 1162..2596 | 100 | <- | Minus |
X | 5328169..5329329 | 1..1161 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 5220708..5222142 | 1162..2596 | 100 | <- | Minus |
arm_X | 5222202..5223362 | 1..1161 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5334773..5336207 | 1162..2596 | 100 | <- | Minus |
X | 5336267..5337427 | 1..1161 | 100 | Minus |
Translation from 60 to 1964
> LD41638.pep MSADARIKQMAPSLDTTEREREHQNVDATNSNSEPSASDWVNFSQWMHCF CVVTFDLNLGQALEHVYPPAFMPSDQEVSNICYMAFPDSNSGCMGDTKFH MRLRCTTRRDSLPGYNAECSPALRQDGSHYWGFVYFRQKRDANLPRGYFQ KSFIIITRLPFFNLYYDILSQLAPRYFEEGTDVLRLASEQINRQWPGLRV GKPLQLPLLDCSYQICIPRTSSSRKSTADGGIAGGAVESPPAMAACPAAK VLASVNEIELFRSLDFVMEQLYTLWELVITAEPIVVVGTSPADCSHMVQT LLAMIAPLEYCAEARPYFTIHDSEFREFTQECSSKTTLPACILGVTNPFF VKLLKDWPHMLRLVDNQKNMQQQQHLLLGQKHARNIASATSFSSSTELGG RIALKSNTNLNGSSSSSNGSGDASSAGLHSKYRPYLKKDKALIKKVLLGM KTKRPEHVQTALIRRHLLELTQSFMIPLERYMASLMPLQKDISPFKSAPN ANSFKLDDFLGTLETAGPQLTSPLKGDWKGLYRRFFRSPNFRGWYGARHR ELQLTLQDLQLQALSVANLEHWAHDKQEVEIIDMILKLKQKLNLYGDKAT QLEGNNGSTQQQIRAQIECMKGLLPPDLKNVVNL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20946-PA | 647 | GF20946-PA | 1..647 | 1..634 | 2596 | 81.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18500-PA | 630 | GG18500-PA | 1..630 | 1..634 | 3003 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24361-PA | 629 | GH24361-PA | 21..629 | 29..634 | 2268 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3309-PA | 634 | CG3309-PA | 1..634 | 1..634 | 3331 | 100 | Plus |
CG3309-PB | 633 | CG3309-PB | 1..633 | 1..634 | 3314 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11055-PA | 622 | GI11055-PA | 1..622 | 14..634 | 2283 | 71.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14644-PA | 655 | GL14644-PA | 42..655 | 26..634 | 2470 | 79.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17271-PA | 670 | GA17271-PA | 43..670 | 25..634 | 2465 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12647-PA | 634 | GM12647-PA | 1..634 | 1..634 | 3363 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16264-PA | 634 | GD16264-PA | 1..634 | 1..634 | 3371 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14812-PA | 627 | GJ14812-PA | 1..627 | 1..634 | 2299 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14685-PA | 677 | GK14685-PA | 30..677 | 3..634 | 2232 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16817-PA | 638 | GE16817-PA | 1..638 | 1..634 | 2910 | 91.9 | Plus |
Translation from 60 to 1964
> LD41638.hyp MSADARIKQMAPSLDTTEREREHQNVDATNSNSEPSASDWVNFSQWMHCF CVVTFDLNLGQALEHVYPPAFMPSDQEVSNICYMAFPDSNSGCMGDTKFH MRLRCTTRRDSLPGYNAECSPALRQDGSHYWGFVYFRQKRDANLPRGYFQ KSFIIITRLPFFNLYYDILSQLAPRYFEEGTDVLRLASEQINRQWPGLRV GKPLQLPLLDCSYQICIPRTSSSRKSTADGGIAGGAVESPPAMAACPAAK VLASVNEIELFRSLDFVMEQLYTLWELVITAEPIVVVGTSPADCSHMVQT LLAMIAPLEYCAEARPYFTIHDSEFREFTQECSSKTTLPACILGVTNPFF VKLLKDWPHMLRLVDNQKNMQQQQHLLLGQKHARNIASATSFSSSTELGG RIALKSNTNLNGSSSSSNGSGDASSAGLHSKYRPYLKKDKALIKKVLLGM KTKRPEHVQTALIRRHLLELTQSFMIPLERYMASLMPLQKDISPFKSAPN ANSFKLDDFLGTLETAGPQLTSPLKGDWKGLYRRFFRSPNFRGWYGARHR ELQLTLQDLQLQALSVANLEHWAHDKQEVEIIDMILKLKQKLNLYGDKAT QLEGNNGSTQQQIRAQIECMKGLLPPDLKNVVNL*