BDGP Sequence Production Resources |
Search the DGRC for LD41718
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 417 |
Well: | 18 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2260-RA |
Protein status: | LD41718.pep: gold |
Preliminary Size: | 2196 |
Sequenced Size: | 2016 |
Gene | Date | Evidence |
---|---|---|
CG2260 | 2001-01-01 | Release 2 assignment |
CG2260 | 2002-04-04 | Blastp of sequenced clone |
CG2260 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2260 | 2008-04-29 | Release 5.5 accounting |
CG2260 | 2008-08-15 | Release 5.9 accounting |
CG2260 | 2008-12-18 | 5.12 accounting |
2016 bp (2016 high quality bases) assembled on 2002-04-04
GenBank Submission: AY095054
> LD41718.complete AAGCAGCACGTGCACGTTGTTGTCAAATTTCAAATTAACTTTATTTGAAG CCAGCTTTTAAGTTAATTTCATCTTGCTGACACATCAAGATGACGAAAGT AACGCCGAAAGGGCGCCCGAAGGCTAAGACGCCGTACAAACGCTACTTCG ACGGCCAAAAGGACACAGAAACGGGCGACGGCGATCTAAAACATGTAAAA GTGTTCAGCAAAAACCGACAGAATTTCACTGGCGATTTTATCAGTATGAT TAATAAAACGAAGAAGCCGCGTCCCCAAAAGGCTCCCGCCAAACCCACAA AGGAGGAGCTGGAAGCTAGGCCCAAGAAGAACCCGATTCCCAAGGAGATC CTCGACAAGTACTCACGTGGCGAGCAAGTGCAGCCGAAAGGTGTGAAAAC GCGGCACTTCAAGGAGCAGCAGACGCGCAAGGAGGTCTACCTCGAATACG CCACCGAGCAGGCGGCCCGCACAGAGCTCCTACTCCAGGAAACCGCTGGG CAGCTACAGGCAGATGAGGGCGAGACCACCGCCGAATTTAGACAGTCCCA AATTGCCGAGAATGTGGATATCCAGTCATCGGCCAAGCACTTCAACCTGA ACATGGAATTCGGTCCTTACCGAATGCGCTACACCAAGAACGGCAGGCAT TTGCTGCTCGGCGGCAAACGCGGTCATGTGGCCGCCTTCGATTGGGTGAC CAAGCGTCTGCACTGCGAATTCAATGCGATGGAGAGCGTCGAGGATGTTC AGTGGCTGCATGTGCCCACCATGTACGCGGTGGCCCAGAAGAGCTGGGTC TATTTCTACGACAAAAAGGGCACCGAACTGCATTGCATCAAGCGGCTGAA TCGGGTCAATCGCCTGGACTTCCTGCCCTACCACTTCCTCCTGGCCGCCG GCAACAGTGCGGGCTATGCTTCCTGGCTGGACGTCTCCATTGGCGAGCTG GTGGGTAACTTTAACACGGGACTGGGCGATATACGCATGCTGCGACACAA TCCCCGAAATGGTGTACTCTGCATTGGCGGCGGACGTGGTGTGGTGTCCA TGTGGTCGCCCAAAGTGCGTGAGCCGCTGGCCAAGCTCCTGTGCCATTCG ACAGCCATGTCTGCTCTGGCGGTGGAACCCAAGGGCCAGTATTTGGTTAC CGCTGGCTTGGATAGGGCTGTGAAAGTTTGGGACATTCGGATGCTGGTGC ACGACAAGCCGCTGACTCATTTCCAGCTGCGTCTGCCCGCCAACGAACTG GATGTGTCGCAACGTGGCATGCTGGCGCTATCGCAGGGCACCTATCTGGA GACCTACTCGGATCTGCTCTCCGGCGGAGGTTCGGGTGACGGTACCCGGT TGCCTTATATCCGCCAACGCTGCGATGCCTTTGTCCACGGGCTGCGTTTC TGCCCGTACGAAGATGTGCTTGGTGTGTCGACGGCCAAGGGCTTCCAATC GCTATTGGTGCCCGGCTCTGGAGAGCCCAACTTCGATGCTATGGAAGACA ATCCGTATGAGACTTCGAAGCAACGACGCGAGCACGAGGTTCACGCTCTG CTGGAGAAGATTCCGCCCGAACTGATCACCCTGGATCCGCAAGAGATCAC TGGCGTGGATGCGCCCACGCTGCAGGAGAAGATCGATGCCAAGAGGAAGC TGTTCCATTTGAAGGCGCCGCGCATCAACATGAAATCGCGCCACAAGATG AAGGGACGTGGCGGCACTGCCAAGGCGGCGCGCAACAAACAGATCGTCAA GGATGCCAAGCGAAAGGAGTTTATTGCCGAGGTGCGCGAGGCCAAGAAGA ACGTTATCAAGCAGCACACAGCCGACGAGGTGGGTGCCAAGGGCAAGGCC AAGACCAAGGCACCACGCTCCGTTCTGGATCGTTTCAAACCCAAGCCACC CAAAAAACAGAAAACCTGAACAGAGTTCGTCTTAAGCAGAAGGAATATAA TGTATACATTAAACTTAGAAGCTTAACCAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2260-RA | 2011 | CG2260-RA | 31..2011 | 1..1981 | 9875 | 99.8 | Plus |
CG1575-RA | 2071 | CG1575-RA | 2016..2071 | 1981..1926 | 250 | 96.4 | Minus |
CG1575.a | 2089 | CG1575.a | 2034..2089 | 1981..1926 | 250 | 96.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8010958..8011169 | 1767..1978 | 99 | <- | Minus |
chrX | 8011232..8012997 | 1..1766 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2260-RA | 1..1830 | 90..1919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2260-RA | 1..1830 | 90..1919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2260-RA | 1..1830 | 90..1919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2260-RA | 1..1830 | 90..1919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2260-RA | 1..1830 | 90..1919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2260-RA | 1..1977 | 1..1978 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2260-RA | 1..1977 | 1..1978 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2260-RA | 28..2004 | 1..1977 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2260-RA | 1..1977 | 1..1978 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2260-RA | 28..2004 | 1..1977 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8119081..8119292 | 1767..1978 | 99 | <- | Minus |
X | 8119355..8121120 | 1..1766 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8119081..8119292 | 1767..1978 | 99 | <- | Minus |
X | 8119355..8121120 | 1..1766 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8119081..8119292 | 1767..1978 | 99 | <- | Minus |
X | 8119355..8121120 | 1..1766 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8013114..8013325 | 1767..1978 | 99 | <- | Minus |
arm_X | 8013388..8015153 | 1..1766 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8127179..8127390 | 1767..1978 | 99 | <- | Minus |
X | 8127453..8129218 | 1..1766 | 100 | Minus |
Translation from 89 to 1918
> LD41718.pep MTKVTPKGRPKAKTPYKRYFDGQKDTETGDGDLKHVKVFSKNRQNFTGDF ISMINKTKKPRPQKAPAKPTKEELEARPKKNPIPKEILDKYSRGEQVQPK GVKTRHFKEQQTRKEVYLEYATEQAARTELLLQETAGQLQADEGETTAEF RQSQIAENVDIQSSAKHFNLNMEFGPYRMRYTKNGRHLLLGGKRGHVAAF DWVTKRLHCEFNAMESVEDVQWLHVPTMYAVAQKSWVYFYDKKGTELHCI KRLNRVNRLDFLPYHFLLAAGNSAGYASWLDVSIGELVGNFNTGLGDIRM LRHNPRNGVLCIGGGRGVVSMWSPKVREPLAKLLCHSTAMSALAVEPKGQ YLVTAGLDRAVKVWDIRMLVHDKPLTHFQLRLPANELDVSQRGMLALSQG TYLETYSDLLSGGGSGDGTRLPYIRQRCDAFVHGLRFCPYEDVLGVSTAK GFQSLLVPGSGEPNFDAMEDNPYETSKQRREHEVHALLEKIPPELITLDP QEITGVDAPTLQEKIDAKRKLFHLKAPRINMKSRHKMKGRGGTAKAARNK QIVKDAKRKEFIAEVREAKKNVIKQHTADEVGAKGKAKTKAPRSVLDRFK PKPPKKQKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20981-PA | 613 | GF20981-PA | 1..603 | 1..599 | 2649 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17987-PA | 608 | GG17987-PA | 1..598 | 1..599 | 3021 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24866-PA | 607 | GH24866-PA | 1..605 | 1..609 | 2389 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2260-PA | 609 | CG2260-PA | 1..609 | 1..609 | 3202 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14417-PA | 604 | GI14417-PA | 1..592 | 1..599 | 2343 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20196-PA | 609 | GL20196-PA | 1..609 | 1..609 | 2600 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15330-PA | 609 | GA15330-PA | 1..609 | 1..609 | 2585 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11210-PA | 609 | GM11210-PA | 1..609 | 1..609 | 3203 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16128-PA | 609 | GD16128-PA | 1..609 | 1..609 | 3209 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18764-PA | 610 | GJ18764-PA | 1..598 | 1..599 | 2418 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18332-PA | 601 | GK18332-PA | 1..599 | 1..608 | 2313 | 72.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17481-PA | 607 | GE17481-PA | 1..597 | 1..599 | 3000 | 95 | Plus |
Translation from 89 to 1918
> LD41718.hyp MTKVTPKGRPKAKTPYKRYFDGQKDTETGDGDLKHVKVFSKNRQNFTGDF ISMINKTKKPRPQKAPAKPTKEELEARPKKNPIPKEILDKYSRGEQVQPK GVKTRHFKEQQTRKEVYLEYATEQAARTELLLQETAGQLQADEGETTAEF RQSQIAENVDIQSSAKHFNLNMEFGPYRMRYTKNGRHLLLGGKRGHVAAF DWVTKRLHCEFNAMESVEDVQWLHVPTMYAVAQKSWVYFYDKKGTELHCI KRLNRVNRLDFLPYHFLLAAGNSAGYASWLDVSIGELVGNFNTGLGDIRM LRHNPRNGVLCIGGGRGVVSMWSPKVREPLAKLLCHSTAMSALAVEPKGQ YLVTAGLDRAVKVWDIRMLVHDKPLTHFQLRLPANELDVSQRGMLALSQG TYLETYSDLLSGGGSGDGTRLPYIRQRCDAFVHGLRFCPYEDVLGVSTAK GFQSLLVPGSGEPNFDAMEDNPYETSKQRREHEVHALLEKIPPELITLDP QEITGVDAPTLQEKIDAKRKLFHLKAPRINMKSRHKMKGRGGTAKAARNK QIVKDAKRKEFIAEVREAKKNVIKQHTADEVGAKGKAKTKAPRSVLDRFK PKPPKKQKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2260-PA | 609 | CG2260-PA | 1..609 | 1..609 | 3202 | 100 | Plus |