BDGP Sequence Production Resources |
Search the DGRC for LD41750
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 417 |
Well: | 50 |
Vector: | pOT2 |
Associated Gene/Transcript | Srp68-RA |
Protein status: | LD41750.pep: gold |
Preliminary Size: | 2096 |
Sequenced Size: | 2102 |
Gene | Date | Evidence |
---|---|---|
CG5064 | 2001-01-01 | Release 2 assignment |
CG5064 | 2001-09-19 | Blastp of sequenced clone |
CG5064 | 2003-01-01 | Sim4 clustering to Release 3 |
Srp68 | 2008-04-29 | Release 5.5 accounting |
Srp68 | 2008-08-15 | Release 5.9 accounting |
Srp68 | 2008-12-18 | 5.12 accounting |
2102 bp (2102 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058698
> LD41750.complete TTGATTTGTGTCGACTGCTAAGAAAATGGTCGTGCAAGAAGATAATCCAA ATACTGGGGACGTTCAGGAAAAGACGGAGACTGCTCCGGTGGCAGAGCCC TCCAAGATCTTCACGGTGGAGATTCTGCACATGATTAAGGATGCCCAGCA ACAACACGGCCTGCGCCACGGCGACTTCCAGAGGTACCGCGGATACTGCA GCCGCCGCATCCGTCGATTGAGGAAGGCCCTGAAGTACCCCCAGGGCGAC AAGCGGCACTTCAAAAGACGCGACGTGACCATTGGCCAATTGACAGGCAA GAAGGCGGACGAGCGTTTCATCCACATCCCATTGATCTGCGCCGAGCGGG CCTGGGCGTATGCCATGCAGCTCAAGCAGGAGTCCAATACGGAGCCGCGA AAGCGTTTCCATCTGGTCAACAAGCTGCGCAGGGCCTGTTTCTATGCCCT CCAGCTCCAGGAGTTGTGTAATACGGAGGCTTTCGATGCGCGCACTAAGC TAGAGTGCGAAGCCTATGTTGCCTGGATGCACGGAACCCTGCACTTTGAG CTGCAGCTATGGAAAACCGCTGGCGAGCACCTAAAGCGCGCCCAAGTGGT GTACGAAAACCTGGGCAAGGCTCTGCCCGAAGATGAACAAGAGCTTTACC GCGCTAAGGTTAATGAATTTACGCCCAATCTGCGCTACTGCGCCTACAAC ATCAGCGGTGGCGCCAGTGGCGGCAAGATCGACGAGATCCTGGAGCTGCG CGCTCAGGGAGTGCTTGAGAATCTTGACGTACTGGTCAGTCAGACAAAGA CGGAGAGCAGCGAGGGCCTGCAGACGATCGACTGGCGCGGTCGCAAGGTC ACCGTGCGTCCGGAGAAGGTGCGTTTGTTCCTGCTCAGTGCTCAGGAGTT GGACAAGTCGCTGGCCAAGACCACCAAGCAGGATGCCAAGATAGAATTGA TTGAGCGTATTTTGATGGACTGCAAGGATGCCATCCAGGCCGTTCGCGAC GAAATCAAACAGGATCCCAAGCTGCGTTCGTTAACCACCGGTCAGACCGT ATCCGGCGTACAATATCTACTGGCATATTTAAGTTATATTCGCCATAGCC GTACACTGCAGCGTAATCTTTGCCTAGTGGAACAGGCTAAGCTCAACTTT TACGATCCCAACCTGCAGTCTCAACAAAATGTGGGTGACGGCAAACGCGT CCGACCCCAGGATTTGGCCCGTCTTTACGAGATCATCCTGCAGAACGTGA CGGAAATGCAGCAGATAAACGGTTTGGAGGACGACGCCACGTACCAAAGC GAGGTGGAGAACCTGGCCATCACCTTCAAGGCCTTCCGCTGCTACTACAT TGCGCTCACACTCATCGACATAAAGAAATGGAAAGAAGCCGTGGCGCTTT ACGAACGCGCATCTAACTACGCCACCGAGGCGCTGAAAGGCAAGAGTAGC CCGGAGTTTCAGCTGCAGGAGGAACTCAAAAAGGTCGTGTCCGCCATTGA CGGATGCAAGTTCTCCGCCCATGCATACAGTGTGCTGGAGGATGACAACA GCGAGGAGTCCGGAACCACCACCAAGTCGCAGAAGACCACAAAACCGCTG TATGAGCGTTTGTCACTATACAAGGAGGATCAGTCCCTGCACACCAAGGC GCCTAACGTGTTCAAGCTAACCCCTGACATGGAACCCATACCATGCAAAC CGATTTTCTTTGACCTGGCTATGACCTACGTGGAGCTTCCCTCGCTGGAG GGCAAACTTGAATCGCCCGGCAAGAAAGGAGCCTCCATTACCGGCTTTGT CAAGGGATTCCTCGGATGGGGTGGGGGCGGAAACAAGTGAAGTGGATTCT AACCACTACAACGTATTCTTCTGGAATTCCACGCATCCATGTTACACTTA TAAAGCCTTTAGATCCATGTCCACGCTGCGGTATGTCCGTTTTATAAGTT ATTTGTTTGGGCTTTTACCCCCGCCAGATTTGTTTTTTCTACGAAACTTT TGTAAGTTGCATATTGAACAACTATTCGGTAATAAAGGAACCTTTTAGAG AGAACCTTTTTAGAGAGTTCTTCGAGGGCAAAAAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 8968518..8969464 | 1133..2079 | 4615 | 99.2 | Plus |
chr3L | 24539361 | chr3L | 8967800..8968463 | 473..1136 | 3305 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 8967388..8967737 | 123..472 | 1690 | 98.9 | Plus |
chr3L | 24539361 | chr3L | 8967162..8967283 | 1..122 | 610 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 8976455..8977404 | 1133..2082 | 4750 | 100 | Plus |
3L | 28110227 | 3L | 8975737..8976400 | 473..1136 | 3320 | 100 | Plus |
3L | 28110227 | 3L | 8975325..8975674 | 123..472 | 1750 | 100 | Plus |
3L | 28110227 | 3L | 8975099..8975220 | 1..122 | 610 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 8969555..8970504 | 1133..2082 | 4750 | 100 | Plus |
3L | 28103327 | 3L | 8968837..8969500 | 473..1136 | 3320 | 100 | Plus |
3L | 28103327 | 3L | 8968425..8968774 | 123..472 | 1750 | 100 | Plus |
3L | 28103327 | 3L | 8968199..8968320 | 1..122 | 610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 8967162..8967283 | 1..122 | 100 | -> | Plus |
chr3L | 8967388..8967737 | 123..472 | 98 | -> | Plus |
chr3L | 8967800..8968462 | 473..1135 | 99 | -> | Plus |
chr3L | 8968521..8969464 | 1136..2079 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Srp68-RA | 1..1815 | 26..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Srp68-RA | 1..1815 | 26..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Srp68-RA | 1..1815 | 26..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Srp68-RA | 1..1815 | 26..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Srp68-RA | 1..1815 | 26..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Srp68-RA | 52..2130 | 1..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Srp68-RA | 52..2130 | 1..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Srp68-RA | 54..2132 | 1..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Srp68-RA | 52..2130 | 1..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Srp68-RA | 54..2132 | 1..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8975099..8975220 | 1..122 | 100 | -> | Plus |
3L | 8975325..8975674 | 123..472 | 100 | -> | Plus |
3L | 8975737..8976399 | 473..1135 | 100 | -> | Plus |
3L | 8976458..8977401 | 1136..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8975099..8975220 | 1..122 | 100 | -> | Plus |
3L | 8975325..8975674 | 123..472 | 100 | -> | Plus |
3L | 8975737..8976399 | 473..1135 | 100 | -> | Plus |
3L | 8976458..8977401 | 1136..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8975099..8975220 | 1..122 | 100 | -> | Plus |
3L | 8975325..8975674 | 123..472 | 100 | -> | Plus |
3L | 8975737..8976399 | 473..1135 | 100 | -> | Plus |
3L | 8976458..8977401 | 1136..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 8968199..8968320 | 1..122 | 100 | -> | Plus |
arm_3L | 8968425..8968774 | 123..472 | 100 | -> | Plus |
arm_3L | 8968837..8969499 | 473..1135 | 100 | -> | Plus |
arm_3L | 8969558..8970501 | 1136..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8968425..8968774 | 123..472 | 100 | -> | Plus |
3L | 8968837..8969499 | 473..1135 | 100 | -> | Plus |
3L | 8969558..8970501 | 1136..2079 | 100 | Plus | |
3L | 8968199..8968320 | 1..122 | 100 | -> | Plus |
Translation from 25 to 1839
> LD41750.pep MVVQEDNPNTGDVQEKTETAPVAEPSKIFTVEILHMIKDAQQQHGLRHGD FQRYRGYCSRRIRRLRKALKYPQGDKRHFKRRDVTIGQLTGKKADERFIH IPLICAERAWAYAMQLKQESNTEPRKRFHLVNKLRRACFYALQLQELCNT EAFDARTKLECEAYVAWMHGTLHFELQLWKTAGEHLKRAQVVYENLGKAL PEDEQELYRAKVNEFTPNLRYCAYNISGGASGGKIDEILELRAQGVLENL DVLVSQTKTESSEGLQTIDWRGRKVTVRPEKVRLFLLSAQELDKSLAKTT KQDAKIELIERILMDCKDAIQAVRDEIKQDPKLRSLTTGQTVSGVQYLLA YLSYIRHSRTLQRNLCLVEQAKLNFYDPNLQSQQNVGDGKRVRPQDLARL YEIILQNVTEMQQINGLEDDATYQSEVENLAITFKAFRCYYIALTLIDIK KWKEAVALYERASNYATEALKGKSSPEFQLQEELKKVVSAIDGCKFSAHA YSVLEDDNSEESGTTTKSQKTTKPLYERLSLYKEDQSLHTKAPNVFKLTP DMEPIPCKPIFFDLAMTYVELPSLEGKLESPGKKGASITGFVKGFLGWGG GGNK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24369-PA | 604 | GF24369-PA | 1..594 | 1..593 | 2965 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14364-PA | 605 | GG14364-PA | 1..605 | 1..604 | 3121 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16536-PA | 607 | GH16536-PA | 1..596 | 1..593 | 2818 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Srp68-PA | 604 | CG5064-PA | 1..604 | 1..604 | 3130 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13825-PA | 606 | GI13825-PA | 1..595 | 1..593 | 2840 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15071-PA | 591 | GL15071-PA | 1..579 | 1..593 | 2699 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18632-PA | 604 | GA18632-PA | 1..592 | 1..593 | 2799 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25108-PA | 604 | GM25108-PA | 1..604 | 1..604 | 3192 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14144-PA | 604 | GD14144-PA | 1..604 | 1..604 | 3179 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11691-PA | 606 | GJ11691-PA | 1..595 | 1..593 | 2852 | 89.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12346-PA | 603 | GK12346-PA | 3..592 | 5..593 | 2831 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20795-PA | 605 | GE20795-PA | 1..605 | 1..604 | 3136 | 96.5 | Plus |
Translation from 25 to 1839
> LD41750.hyp MVVQEDNPNTGDVQEKTETAPVAEPSKIFTVEILHMIKDAQQQHGLRHGD FQRYRGYCSRRIRRLRKALKYPQGDKRHFKRRDVTIGQLTGKKADERFIH IPLICAERAWAYAMQLKQESNTEPRKRFHLVNKLRRACFYALQLQELCNT EAFDARTKLECEAYVAWMHGTLHFELQLWKTAGEHLKRAQVVYENLGKAL PEDEQELYRAKVNEFTPNLRYCAYNISGGASGGKIDEILELRAQGVLENL DVLVSQTKTESSEGLQTIDWRGRKVTVRPEKVRLFLLSAQELDKSLAKTT KQDAKIELIERILMDCKDAIQAVRDEIKQDPKLRSLTTGQTVSGVQYLLA YLSYIRHSRTLQRNLCLVEQAKLNFYDPNLQSQQNVGDGKRVRPQDLARL YEIILQNVTEMQQINGLEDDATYQSEVENLAITFKAFRCYYIALTLIDIK KWKEAVALYERASNYATEALKGKSSPEFQLQEELKKVVSAIDGCKFSAHA YSVLEDDNSEESGTTTKSQKTTKPLYERLSLYKEDQSLHTKAPNVFKLTP DMEPIPCKPIFFDLAMTYVELPSLEGKLESPGKKGASITGFVKGFLGWGG GGNK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Srp68-PA | 604 | CG5064-PA | 1..604 | 1..604 | 3130 | 100 | Plus |