BDGP Sequence Production Resources |
Search the DGRC for LD41848
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 418 |
Well: | 48 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4558-RA |
Protein status: | LD41848.pep: gold |
Preliminary Size: | 2050 |
Sequenced Size: | 2085 |
Gene | Date | Evidence |
---|---|---|
CG4558 | 2001-01-01 | Release 2 assignment |
CG4558 | 2001-10-10 | Blastp of sequenced clone |
CG4558 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4558 | 2008-04-29 | Release 5.5 accounting |
CG4558 | 2008-08-15 | Release 5.9 accounting |
CG4558 | 2008-12-18 | 5.12 accounting |
2085 bp (2085 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061462
> LD41848.complete AACAAATAAAATTATAGAAAACAAAAAAAAAAAAGGATGCTATGTTCTAA AAATGTACGTTGAGTGATTTGCGACCAACGGGAAATCCCCCACAAAGACA CGACAACGAAATTAGATCGGAAAATCGAGCTCCAACGCATTTGTTTATGT GACCCAAGGAGCGCCATGGCGGATCCGGAGGATTATGATCTGAACTTTGT TCAGCTGAGTCGCCAGCAGGCGCTGCAGCGATATGCGGGTGCAGTGCGTC AGCTGCGCCGGCTGGCTGATCAGCGGTACGGTGTGCGATCCCTTAGCTTC GACAATTATGTGCTGTTTCAGTATTTCCGGCAACGCAATTGGCAAACTGG CGTCACGCCACCCGCCCCCTTAATGGCCTACCTCAAGCTTGAGGTACTGC ATCATCTGCTGGACCGACGACGACAGATCCTCTGCTGGCTGTTCTACCTC ACGGTGGTGTCGCTCTGCGTGGCCGCCTACCGTTATGAGGTAACCAGCTC CACCGGCGGACATCAGGAGCGCGTTGTCCAGGCCATGGTCTATCCCGGGA TGCGCATGTGGCGGCGGATGACCATGCCGCTGATCCAACGATTCCCACAG CTTACCGAACTCTACGACGAGTCCTGCCTGATGGGCAATCCGTTTTTTCA GCTAGAGGATCTGAGCTGCGGACCGTGTGCCGAAGTGGAGACCGTCTGGC TGGAGGGCGAGGAGTGTGCAAATGGTCATCCGCTGGAGTACCATCAGAAC CACAAGTGCCATCAGCCGGAGGGATCGCCCATCGCCTTTAGGAGCAACCA GCAGGAGTCCATTGACTTGAGCCACTTCTACAACATCTACGCTAGCAATC ATCAGATCTTCCAGCGCGACGCGTATCGGGTGCACTCGACCAACCAGGAT GTGCACAATCTTGAGGATCTCTTTGGGCAGTTCAACAGCAGCTGGACCCA GCAGGCGCACAATCTTTGGCGCTGCAATCGCATGCTGCCCGCGCGACTCC TGCGTCCCATTTTCGCCCGGCCAACGCGATTGCCCAGCATGGGCGTGGCC CTGGAGCGTTATGTGGCCATCGATACTGCCCAGGCGCCGGCCTACACATT GCCGGAAACGGAATGCCCCAATGTCTATATACACCAGGCGGTAGGCACGC GGTTCATCATCCTGCGACCCACCAGTGAGTGCCGGCACCGCTGTCGCACC TTGTCTCTGCGACTTACCCAGTCCTTTGTGCGTGAGTATCGTTTCGATTG CTTTTGTTCCGGGGCCAACACATCACATCAGAAGGTTCACTGTTTAAGGA TACCTTAGATATACCTTATTTTTTGAGTTATTTAACAAAGGCAGTAGATA AGCTCTTGGTCAGCTATAACTGACAAATATTATAGTTTTGTTATAATTTC AATTGAGTATTTGTTGCAGCAAGTTTTCAATGAACCTTTCAGTGTGGGAT TTCTTACTAATTCCCTATGCTTTTGCAGTCAGTTACAATTGGTTGTACTG GAAACCGATCTCTGCGCCGGATCCCATCTCCGAAACGCTGTCCATCAGCC TAATTGGATCTTACTGCTAGAGGATGCCTATTCAGATGGCAGTCCACGTT TCCCGCTTCCCTCGCTCCTAGCTTTAAGCGCAATATACTTATATATAGAT ATATACACACACGACAACCAGGACTTTTACCAAGCCAAAATTATTTTACG AATTTTGCCGCTCCATTGGATAAGCAAGCAAAACAAAAGTATGGAAACAA GGGAAGCTAGAAGCTGCCTTCGTTTTCAATTTACTAGACCCTTAGGCCAC CGGCTCAATTCGTCGCCCATTGTAATCCTCAAGTCCTAGATCGTAAGCCT AAGTTTAGTTAAACAGTTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCC TTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGT TCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGTAAATATC CATTGCCAGACTTGAGTTTGAATTTGTGTTTTTGCAACAACTCACGAAAT AAAAGATACCTATAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6742026..6744076 | 1..2063 | 9870 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 6849822..6851884 | 1..2063 | 10315 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 6857920..6859982 | 1..2063 | 10315 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 1455..1486 | 1..32 | 115 | 84.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6742026..6743392 | 1..1367 | 99 | == | Plus |
chrX | 6743393..6744076 | 1381..2063 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4558-RA | 1..1143 | 166..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4558-RA | 1..1143 | 166..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4558-RA | 1..1143 | 166..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4558-RA | 1..1143 | 166..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4558-RA | 1..1143 | 166..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4558-RA | 50..2112 | 1..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4558-RA | 50..2112 | 1..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4558-RA | 53..2115 | 1..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4558-RA | 51..2113 | 1..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4558-RA | 53..2115 | 1..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6849822..6851884 | 1..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6849822..6851884 | 1..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6849822..6851884 | 1..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6743855..6745917 | 1..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6857920..6859982 | 1..2063 | 100 | Plus |
Translation from 165 to 1307
> LD41848.pep MADPEDYDLNFVQLSRQQALQRYAGAVRQLRRLADQRYGVRSLSFDNYVL FQYFRQRNWQTGVTPPAPLMAYLKLEVLHHLLDRRRQILCWLFYLTVVSL CVAAYRYEVTSSTGGHQERVVQAMVYPGMRMWRRMTMPLIQRFPQLTELY DESCLMGNPFFQLEDLSCGPCAEVETVWLEGEECANGHPLEYHQNHKCHQ PEGSPIAFRSNQQESIDLSHFYNIYASNHQIFQRDAYRVHSTNQDVHNLE DLFGQFNSSWTQQAHNLWRCNRMLPARLLRPIFARPTRLPSMGVALERYV AIDTAQAPAYTLPETECPNVYIHQAVGTRFIILRPTSECRHRCRTLSLRL TQSFVREYRFDCFCSGANTSHQKVHCLRIP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20862-PA | 421 | GF20862-PA | 7..396 | 6..360 | 1524 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19618-PA | 385 | GG19618-PA | 1..360 | 1..360 | 1852 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24793-PA | 418 | GH24793-PA | 8..393 | 6..360 | 1365 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4558-PA | 380 | CG4558-PA | 1..380 | 1..380 | 2061 | 100 | Plus |
CG4558-PB | 385 | CG4558-PB | 1..360 | 1..360 | 1921 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15290-PA | 444 | GI15290-PA | 7..419 | 6..360 | 1361 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13402-PA | 348 | GL13402-PA | 48..317 | 6..259 | 958 | 70.4 | Plus |
Dper\GL23011-PA | 88 | GL23011-PA | 11..88 | 63..143 | 259 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18256-PA | 455 | GA18256-PA | 48..430 | 6..360 | 1443 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12541-PA | 363 | GM12541-PA | 1..363 | 1..367 | 1862 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24760-PA | 94 | GD24760-PA | 1..69 | 292..360 | 338 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16437-PA | 384 | GJ16437-PA | 7..359 | 6..360 | 1427 | 77.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25678-PA | 380 | GK25678-PA | 12..355 | 11..360 | 1324 | 71.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16779-PA | 385 | GE16779-PA | 1..360 | 1..360 | 1821 | 93.3 | Plus |
Translation from 165 to 1307
> LD41848.hyp MADPEDYDLNFVQLSRQQALQRYAGAVRQLRRLADQRYGVRSLSFDNYVL FQYFRQRNWQTGVTPPAPLMAYLKLEVLHHLLDRRRQILCWLFYLTVVSL CVAAYRYEVTSSTGGHQERVVQAMVYPGMRMWRRMTMPLIQRFPQLTELY DESCLMGNPFFQLEDLSCGPCAEVETVWLEGEECANGHPLEYHQNHKCHQ PEGSPIAFRSNQQESIDLSHFYNIYASNHQIFQRDAYRVHSTNQDVHNLE DLFGQFNSSWTQQAHNLWRCNRMLPARLLRPIFARPTRLPSMGVALERYV AIDTAQAPAYTLPETECPNVYIHQAVGTRFIILRPTSECRHRCRTLSLRL TQSFVREYRFDCFCSGANTSHQKVHCLRIP*