BDGP Sequence Production Resources |
Search the DGRC for LD41911
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 419 |
Well: | 11 |
Vector: | pOT2 |
Associated Gene/Transcript | Ote-RA |
Protein status: | LD41911.pep: gold |
Preliminary Size: | 1710 |
Sequenced Size: | 1579 |
Gene | Date | Evidence |
---|---|---|
CG5581 | 2001-01-01 | Release 2 assignment |
CG5581 | 2001-07-04 | Blastp of sequenced clone |
CG5581 | 2003-01-01 | Sim4 clustering to Release 3 |
Ote | 2008-04-29 | Release 5.5 accounting |
Ote | 2008-08-15 | Release 5.9 accounting |
Ote | 2008-12-18 | 5.12 accounting |
1579 bp (1579 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051940
> LD41911.complete CTATTTTAGCACACACCGCGTAAAAGCGACGCCGATTTCAATTTTCAACG AATTATTAAAAGTGTGCGAAAAACCATACAATGGCCGATGTGGACGATTT TGATTCTCTGTCCAATGCTGAGTTGCGCGCCAAGATGCTGGCACAGGGGC TGCCCAACATCCCCGTGACGGATAGCAGCCGGAAGGTTCTAGTAAAGCGT CTGCGCGCCTCCATTGGTGGCCAGGCGTCGCCGGCCGCTAGTCCCAAGAA GACCAACAGGCGGGAGACCCTGGCTCCCGCACCTGGTGCACCATCTGCTC CGGCGGCAGCCTCCACGCCGGTGGACAAGCTGGATGGCAACAAGGTGGCG CCCGCCACAAAGGCTCGGCGCACAATTACCGCTGCAGAGGCCAAGGAACC AGTGCGTCGATTACCCGAGGAAGCTATACGCCGACGCCCCGACGAAGCCG ACCGCCTACGATCCGAGGAGCCCGTTGCCGCCAGGAAGCCAACAACTGCT CCTGCTGCTCAACCCGTACAGACCCGGCGCACTTCCACCTCCTCGGGGTC TGAAAGGAAAGTAGTGGAGCCCTTGAGGAAGCCAGAAACCATTGTTGAGC AACCGGCTTCCTCGAAGCGCGCTGATCGAGAGGAGAATTATCTTAAGGTC AACTCCCTGATTGTCCTAGAGTCCGATGAAGAAGAGGACGAGCAGCTAGT CCAGGCTGCAGATCTGGTGGAGCAGGAGCACGCGGCCAGACAGAAGACCA CGAAGCTCGCAAGCAGCGGCACCACTACGTACGAGTACAAAAGCAAGGTT GTGGAGCCTCCACGCCGACAGGTCTATGAAGCGACAGCAGCTCCCGTGCT GCCGCCATCTGTGCCATCTGCCAGAGCGCAGACCACCAGTTCCACCAGGT CCTATGACTATGCGAGCAACCCAGCACCCGGTCGCTATAGCAGTTTTGTG CGTACTGCAGCCCAAGGCTATGTGACTGCAGAGGCTCCGCCGGTGGCCTC CTACTCATCCAGCTACAAGCGTACCTATGCTAACGAGCTGAGCGACGACA CTGATTCCAAGGAAGACCAGTACGAAAGCACATTTGCCAGGAATCTAGCT CGTTTGCGAGCCGAACGGATTGGAGATCGCATCAGCCCGTATTCCAGACG CACTCTGGCCAGTGGAAACGCGGGTAGCGGTTCTCTCGGCTATGAGCCGC GTGCCAGGCGCTCCTTGCGCCCGAATGATAACAGCGTATCCGAGGCCTTT AACCGTTGGTTGAACAGCCTGGAGCAGAAGTATCACATCAAGTCGAAGCT GTTCATTGTACTCCTCGTCCTTTTGTTAATCGGCGTTTATTACATATTCT ACTGACCGGCGCATCATTGTTCTTATTTCGAATTTGTAATCTAGTTTGTA TACCATGTTGGATATGTTTTGTAAACAAGACTGCCGCCGCGGTCTTTGTA TGAATCTTGTTTTGATGTAACTTGAGCTTGAGTTTGACTAGCATTTAAGC TGCGTGTTATCCGTGTTCAAATAAAGCCCACTTGCAGGGAATCTCCACAG TTGAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ote-RA | 1587 | Ote-RA | 35..1587 | 1..1553 | 7765 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 14162694..14164244 | 1553..1 | 7250 | 97.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18275605..18277159 | 1555..1 | 7775 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18276804..18278358 | 1555..1 | 7775 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14162694..14164244 | 1..1553 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ote-RA | 1..1275 | 81..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ote-RA | 1..1275 | 81..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ote-RA | 1..1275 | 81..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ote-RA | 1..1275 | 81..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ote-RA | 1..1275 | 81..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ote-RA | 35..1587 | 1..1553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ote-RA | 35..1587 | 1..1553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ote-RA | 19..1571 | 1..1553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ote-RA | 35..1587 | 1..1553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ote-RA | 19..1571 | 1..1553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18275607..18277159 | 1..1553 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18275607..18277159 | 1..1553 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18275607..18277159 | 1..1553 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14163112..14164664 | 1..1553 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18276806..18278358 | 1..1553 | 100 | Minus |
Translation from 80 to 1354
> LD41911.hyp MADVDDFDSLSNAELRAKMLAQGLPNIPVTDSSRKVLVKRLRASIGGQAS PAASPKKTNRRETLAPAPGAPSAPAAASTPVDKLDGNKVAPATKARRTIT AAEAKEPVRRLPEEAIRRRPDEADRLRSEEPVAARKPTTAPAAQPVQTRR TSTSSGSERKVVEPLRKPETIVEQPASSKRADREENYLKVNSLIVLESDE EEDEQLVQAADLVEQEHAARQKTTKLASSGTTTYEYKSKVVEPPRRQVYE ATAAPVLPPSVPSARAQTTSSTRSYDYASNPAPGRYSSFVRTAAQGYVTA EAPPVASYSSSYKRTYANELSDDTDSKEDQYESTFARNLARLRAERIGDR ISPYSRRTLASGNAGSGSLGYEPRARRSLRPNDNSVSEAFNRWLNSLEQK YHIKSKLFIVLLVLLLIGVYYIFY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ote-PA | 424 | CG5581-PA | 1..424 | 1..424 | 2116 | 100 | Plus |
bocksbeutel-PB | 399 | CG9424-PB | 1..394 | 1..422 | 189 | 23.9 | Plus |
bocksbeutel-PA | 351 | CG9424-PA | 1..249 | 1..283 | 173 | 25.1 | Plus |
Translation from 80 to 1354
> LD41911.pep MADVDDFDSLSNAELRAKMLAQGLPNIPVTDSSRKVLVKRLRASIGGQAS PAASPKKTNRRETLAPAPGAPSAPAAASTPVDKLDGNKVAPATKARRTIT AAEAKEPVRRLPEEAIRRRPDEADRLRSEEPVAARKPTTAPAAQPVQTRR TSTSSGSERKVVEPLRKPETIVEQPASSKRADREENYLKVNSLIVLESDE EEDEQLVQAADLVEQEHAARQKTTKLASSGTTTYEYKSKVVEPPRRQVYE ATAAPVLPPSVPSARAQTTSSTRSYDYASNPAPGRYSSFVRTAAQGYVTA EAPPVASYSSSYKRTYANELSDDTDSKEDQYESTFARNLARLRAERIGDR ISPYSRRTLASGNAGSGSLGYEPRARRSLRPNDNSVSEAFNRWLNSLEQK YHIKSKLFIVLLVLLLIGVYYIFY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12772-PA | 481 | GF12772-PA | 1..235 | 1..258 | 576 | 58.8 | Plus |
Dana\GF12772-PA | 481 | GF12772-PA | 309..481 | 244..424 | 507 | 63 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20980-PA | 421 | GG20980-PA | 1..421 | 1..424 | 1374 | 82.1 | Plus |
Dere\GG17352-PA | 399 | GG17352-PA | 1..106 | 1..99 | 162 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20225-PA | 468 | GH20225-PA | 1..468 | 1..424 | 551 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ote-PA | 424 | CG5581-PA | 1..424 | 1..424 | 2116 | 100 | Plus |
bocks-PB | 399 | CG9424-PB | 1..394 | 1..422 | 189 | 23.9 | Plus |
bocks-PA | 351 | CG9424-PA | 1..249 | 1..283 | 173 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19394-PA | 430 | GI19394-PA | 1..430 | 1..424 | 617 | 43.5 | Plus |
Dmoj\GI23513-PA | 425 | GI23513-PA | 1..80 | 1..80 | 175 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16713-PA | 187 | GL16713-PA | 8..187 | 238..424 | 527 | 58.5 | Plus |
Dper\GL16712-PA | 211 | GL16712-PA | 1..170 | 1..188 | 425 | 60.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18984-PA | 415 | GA18984-PA | 1..415 | 1..424 | 1061 | 57.4 | Plus |
Dpse\GA21776-PA | 398 | GA21776-PA | 1..79 | 1..76 | 155 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19914-PA | 424 | GM19914-PA | 1..424 | 1..424 | 1873 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25400-PA | 424 | GD25400-PA | 1..424 | 1..424 | 1897 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22457-PA | 427 | GJ22457-PA | 1..427 | 1..424 | 716 | 48.4 | Plus |
Dvir\GJ10265-PA | 419 | GJ10265-PA | 1..82 | 1..80 | 186 | 51.2 | Plus |