BDGP Sequence Production Resources |
Search the DGRC for LD41918
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 419 |
Well: | 18 |
Vector: | pOT2 |
Associated Gene/Transcript | Ranbp11-RA |
Protein status: | LD41918.pep: gold |
Preliminary Size: | 3142 |
Sequenced Size: | 3397 |
Gene | Date | Evidence |
---|---|---|
CG8212 | 2001-01-01 | Release 2 assignment |
CG33139 | 2001-11-29 | Blastp of sequenced clone |
CG33139 | 2003-01-01 | Sim4 clustering to Release 3 |
Ranbp11 | 2008-04-29 | Release 5.5 accounting |
Ranbp11 | 2008-08-15 | Release 5.9 accounting |
Ranbp11 | 2008-12-18 | 5.12 accounting |
3397 bp (3397 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069650
> LD41918.complete CAGCACGCGCCGCAGAAATTTGCCAATAATTTTCGTCCTCGCAAGCGTCG CAAGAGGAGGCGTCGTGTGATGGAAATGGCAACGGGAGCAGTATCTGGAG CAGCCGCAGCGGGTGCTGGAGCGTCGGTGGAGCAGCTGGTAGCCCAGACA CTGCAGGCGGCCACAAATCCGAGCCATGAGATTGTCCAGAAGGCGGAGGC GCAGCTGCGCGAGTGGGAGCAGCAGCCGGGCTTCTTTCCCACGATTGCCC GTCTGAGCATGCGACGAGGTGGCGGCGGCGACGTGGTGTCCAGTACGGAG GACTCCGAGGTGAAGGTGCGCTGGATGGCGGCTGTCTACCTAAAGAATGG CGTGGAGCGCTATTGGCGGCCCAATTCGCGGCAGGAACTGCCCGCGGAGC AAAAGCAGCAGATCCGGGAAGTACTTCTGCGTCACTACGACGCAGAGGAA GTGCCCCAGGTAGCCCTGCAGGTAGCCGTGCTCCTGGGTCGCCTGGCACG CACGGATTACCCGCGATTTTGGCCGGATCTGCTGCCGACACTCATGAAGC AGCTGCAGTCCTGCGGTACGGATGGGGATTCGGCCCTGCAGCAGCGAATT CTTATTGTCCTACACTATGTCCTCAAGGCCCTGGCCTCACGGCGTCTGAT GGCCGAGCAGCGTGCCTTCCAGGAGCTGGGCTTACAGATATTTGGATATC TGGCGTGGGACATTTGGGCACCACTTACGACGCGCTTTTTGCAGCTCGTG CGAAAGGACGAGGCCATGGCCCTCAATGCCCTTCAACGGGCGTATGTGGT GATGAGAACCCTGCGCAAGCTGGTGGTCTACGGCTGTGCCAAGCCGTACA AGTCCACGGATCACATGAACTTTGTGGAGCAGCTTTTCCAGCGGTTGCGA CAGTGCCTCGAACTGCGCTATGAACTGAAAGTGGGATCGGCCACACCAGG CACTGCCACGATACTCACCGAATTGGAGCGCTTTGTGATTAAGATGATGA AGACCCTCAATGAACTGATGGAGCGGCATTCTGTGTCCTTTGCGAGGTTC GTTCCTGTGGCCCTGGAGTTCAGCTTCCACTATGTGTTCCACGAGGGCAC CGCCCTCATTTTCGACGCCGGCGATCGCATTAACTTTAAAAACTTTGCCA TACAGGCGCTGAACATGCTGAAAGGTATCATGCTGAGCGGCAACGATAGC ATCAGTGCTCCGCCCGAAGGTGGTGCTCACATAGAGGATGAGCTGTTAGC CAGCGCTGCTCAAAGCCAAGCCAAGTTCTTCACAGCGGAGCGAGTGACCT ACATCTGTGAGAAGATCGTGACGCACTATTTTCTGCTCACTCAACAGGAG CTGGAGGAGTGGCAGCAGGATCCAGAGGGCTATGACCAGGACGACGGCGG TGGTGATGCTTGGAAGTACGCCTTAAGGCCAAGCGTGGAGACCCTTTATT TCACATGTTTTACTCAGCATTCGCAAGTGATGATTCCGGAGGTGCTCCGT TTCGTAAGGCGTGCCCAGCAATTGCAGCTGACCCCGGAATCTGACCTGAA GGCCATTCTACTGAAAGACGCTATCTACAATGCCGTAGGCCAGGCAGCCT TTCATTTCTTTAACAAGCTGGACTTTGGCGCATGGCTGACATCCCAATTG CTTGCGGAGCTGCGCGTGGAAGCTCTGAACTTTCGGATCCTACGGCGTCG CATCATCTGGCTGGTAGGCCATTGGGTTGGCGTCCAGTTGCCCAGAGAAC TGAGACCGCTGGCTTACGAAGCATGCCTGCATCTTCTCCGGCCGCAGGAG GACATGCCCACCAGGTTGGCCGCTGCCAGGACGTTGAATCTGTTGATCGA CGATTTTGAGTTTATGCCGGAAGCGTTCCACCCGTATTTTCCATCCCTCT TCGAGGCCCTCTTTTTGCTGCTCCATGAGGCCGGCGAGTGCGACACCAAG ATCGTGGTGCTGGGCACGATGACGCTACTTGTGGAGAAGATGAGCGAGTA CATCGAGCCGCAGGCATTGCAGTTCATTGCGTATTTACCCCTCCTGTGGC GCGAGAGCGAGGAACACGACCTTCTGCGCTGCGCCATCATTGGCACCCTA GAGCAGCTGGTTCGAACGATACGGGATGTCCCAGAGCCCATGAAGCCCTT CCTCTACAGCGTGATCGAGCTGAGCACGGATCTTCAGCAACCCTCGCACG TCTACCTCATCGAAGATGGTATCATGCTCTGGCTGGCGGTGATTGGGAAC TCGACTGCACTGACACCCGAACTACTTGGTCTGTGCGACCACCTTCTGCC TATTATCGAGATGTCATCGGAGAACCTGCGCACCGTGCTGCAGCTGATTC ATGCCTATATACTGCTGGACGCTCAGGCCTATCTGAGTCGTTACGGTGAG GGTTTCGTGGCCTACTGCGTGCGCTCTTTCGAGGACATACGTGTGGAGGG AATAATTGCCATGCTGCGGATCATCGAGACATGCCTGAAAACGGACGCGG CGTTGGGACTGCGGCTGGTGCGCCCAGCACTGCCCTTTGTCTTCCAGCAG GTGTGCCTTAAGCAGGAGTATCCCATGACAATGGGATGGTATCTGACCAT CGTGGCCCGCACCCTGCTCATTGACCAGTCTGTTTTCATGTCGGTGGTAC AGCAATTGCCACAAGCGGACGCTTTGGCCCGCATCCTGGACGTTTGGATC GAGATGTTCCCAATGGTTCCCGACACGCACGCAGAGAAGAGAAAGCTCTT CTGCCTGGCCTTCGCCTCGATCTTTGGAAGCAATGAGCTGCTGCTTGCTC GCCTGCCACATATCCTGCAGCTGGTGGACGAAACGTTGGGCGAAGTGATG GACAAGCAGTACGCCGCCACCGAGGAGGGTGCGTCACAGGCCACGCCTCG CTTCTATGATTCATTGGTCATTCATGACGAACACGAGCTGGACGATCTGC AGCAGCAGCTGGGCAGTGGCGGCGGTGTCAGCGAGGAATTTCACACCAAG GGCTACCCGGCCAAGACCTATCACGACGACCGCCACAGGCAGTTGGTGCT CAAAGATCCCGTTTACAAGATCCCCCTTACCGAGTATCTCAAGTGGCAGC TGCAGTCGTTGCAGGCACAGCTGGGATCCCAGCGATATGAGCAGGTAATG TGCTCCGTGGTTCCCGAGGTACGGGAAAGGATTACCATGTACATAGAGCA GACTGTGCCCAAGGCCTGTGTGGTGTGCGCGGGCTCCGGCTCCGGATCGG GAGCGCCTGCGGACAGGACGCTCTCCGAACAGGTGGAGTCCGGCTGATTC CGGACTGCTGTGCTTTAAAAGCTTTCTACGCTAAGTTATTAATGTATTTT GTATTGAAATTATATATTTTTAATTGTTAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11569916..11572102 | 1..2187 | 99 | -> | Plus |
chr2R | 11573407..11574597 | 2188..3378 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp11-RA | 1..3228 | 70..3297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp11-RA | 1..3228 | 70..3297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp11-RA | 1..3228 | 70..3297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp11-RA | 1..3228 | 70..3297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp11-RA | 1..3228 | 70..3297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp11-RA | 21..3398 | 1..3378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp11-RA | 21..3398 | 1..3378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp11-RA | 18..3395 | 1..3378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp11-RA | 21..3398 | 1..3378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp11-RA | 18..3395 | 1..3378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15682736..15684922 | 1..2187 | 100 | -> | Plus |
2R | 15686225..15687415 | 2188..3378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15682736..15684922 | 1..2187 | 100 | -> | Plus |
2R | 15686225..15687415 | 2188..3378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15682736..15684922 | 1..2187 | 100 | -> | Plus |
2R | 15686225..15687415 | 2188..3378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11570241..11572427 | 1..2187 | 100 | -> | Plus |
arm_2R | 11573730..11574920 | 2188..3378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15683935..15686121 | 1..2187 | 100 | -> | Plus |
2R | 15687424..15688614 | 2188..3378 | 100 | Plus |
Translation from 0 to 3296
> LD41918.hyp QHAPQKFANNFRPRKRRKRRRRVMEMATGAVSGAAAAGAGASVEQLVAQT LQAATNPSHEIVQKAEAQLREWEQQPGFFPTIARLSMRRGGGGDVVSSTE DSEVKVRWMAAVYLKNGVERYWRPNSRQELPAEQKQQIREVLLRHYDAEE VPQVALQVAVLLGRLARTDYPRFWPDLLPTLMKQLQSCGTDGDSALQQRI LIVLHYVLKALASRRLMAEQRAFQELGLQIFGYLAWDIWAPLTTRFLQLV RKDEAMALNALQRAYVVMRTLRKLVVYGCAKPYKSTDHMNFVEQLFQRLR QCLELRYELKVGSATPGTATILTELERFVIKMMKTLNELMERHSVSFARF VPVALEFSFHYVFHEGTALIFDAGDRINFKNFAIQALNMLKGIMLSGNDS ISAPPEGGAHIEDELLASAAQSQAKFFTAERVTYICEKIVTHYFLLTQQE LEEWQQDPEGYDQDDGGGDAWKYALRPSVETLYFTCFTQHSQVMIPEVLR FVRRAQQLQLTPESDLKAILLKDAIYNAVGQAAFHFFNKLDFGAWLTSQL LAELRVEALNFRILRRRIIWLVGHWVGVQLPRELRPLAYEACLHLLRPQE DMPTRLAAARTLNLLIDDFEFMPEAFHPYFPSLFEALFLLLHEAGECDTK IVVLGTMTLLVEKMSEYIEPQALQFIAYLPLLWRESEEHDLLRCAIIGTL EQLVRTIRDVPEPMKPFLYSVIELSTDLQQPSHVYLIEDGIMLWLAVIGN STALTPELLGLCDHLLPIIEMSSENLRTVLQLIHAYILLDAQAYLSRYGE GFVAYCVRSFEDIRVEGIIAMLRIIETCLKTDAALGLRLVRPALPFVFQQ VCLKQEYPMTMGWYLTIVARTLLIDQSVFMSVVQQLPQADALARILDVWI EMFPMVPDTHAEKRKLFCLAFASIFGSNELLLARLPHILQLVDETLGEVM DKQYAATEEGASQATPRFYDSLVIHDEHELDDLQQQLGSGGGVSEEFHTK GYPAKTYHDDRHRQLVLKDPVYKIPLTEYLKWQLQSLQAQLGSQRYEQVM CSVVPEVRERITMYIEQTVPKACVVCAGSGSGSGAPADRTLSEQVESG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ranbp11-PA | 1075 | CG33139-PA | 1..1075 | 24..1098 | 5529 | 100 | Plus |
Translation from 69 to 3296
> LD41918.pep MEMATGAVSGAAAAGAGASVEQLVAQTLQAATNPSHEIVQKAEAQLREWE QQPGFFPTIARLSMRRGGGGDVVSSTEDSEVKVRWMAAVYLKNGVERYWR PNSRQELPAEQKQQIREVLLRHYDAEEVPQVALQVAVLLGRLARTDYPRF WPDLLPTLMKQLQSCGTDGDSALQQRILIVLHYVLKALASRRLMAEQRAF QELGLQIFGYLAWDIWAPLTTRFLQLVRKDEAMALNALQRAYVVMRTLRK LVVYGCAKPYKSTDHMNFVEQLFQRLRQCLELRYELKVGSATPGTATILT ELERFVIKMMKTLNELMERHSVSFARFVPVALEFSFHYVFHEGTALIFDA GDRINFKNFAIQALNMLKGIMLSGNDSISAPPEGGAHIEDELLASAAQSQ AKFFTAERVTYICEKIVTHYFLLTQQELEEWQQDPEGYDQDDGGGDAWKY ALRPSVETLYFTCFTQHSQVMIPEVLRFVRRAQQLQLTPESDLKAILLKD AIYNAVGQAAFHFFNKLDFGAWLTSQLLAELRVEALNFRILRRRIIWLVG HWVGVQLPRELRPLAYEACLHLLRPQEDMPTRLAAARTLNLLIDDFEFMP EAFHPYFPSLFEALFLLLHEAGECDTKIVVLGTMTLLVEKMSEYIEPQAL QFIAYLPLLWRESEEHDLLRCAIIGTLEQLVRTIRDVPEPMKPFLYSVIE LSTDLQQPSHVYLIEDGIMLWLAVIGNSTALTPELLGLCDHLLPIIEMSS ENLRTVLQLIHAYILLDAQAYLSRYGEGFVAYCVRSFEDIRVEGIIAMLR IIETCLKTDAALGLRLVRPALPFVFQQVCLKQEYPMTMGWYLTIVARTLL IDQSVFMSVVQQLPQADALARILDVWIEMFPMVPDTHAEKRKLFCLAFAS IFGSNELLLARLPHILQLVDETLGEVMDKQYAATEEGASQATPRFYDSLV IHDEHELDDLQQQLGSGGGVSEEFHTKGYPAKTYHDDRHRQLVLKDPVYK IPLTEYLKWQLQSLQAQLGSQRYEQVMCSVVPEVRERITMYIEQTVPKAC VVCAGSGSGSGAPADRTLSEQVESG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11495-PA | 1078 | GF11495-PA | 2..1078 | 11..1075 | 5035 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20539-PA | 1071 | GG20539-PA | 3..1071 | 9..1075 | 5465 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22822-PA | 1075 | GH22822-PA | 3..1051 | 19..1057 | 4143 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Impbeta11-PA | 1075 | CG33139-PA | 1..1075 | 1..1075 | 5529 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21200-PA | 1055 | GI21200-PA | 2..1030 | 18..1054 | 4277 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11765-PA | 740 | GL11765-PA | 1..740 | 330..1075 | 3455 | 89.4 | Plus |
Dper\GL11764-PA | 319 | GL11764-PA | 14..319 | 20..328 | 1302 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17313-PA | 1070 | GA17313-PA | 14..1070 | 20..1075 | 4807 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21630-PA | 1087 | GM21630-PA | 1..946 | 1..946 | 4954 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11132-PA | 1075 | GD11132-PA | 1..1075 | 1..1075 | 5613 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20801-PA | 1063 | GJ20801-PA | 2..1050 | 18..1063 | 4394 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17845-PA | 1089 | GK17845-PA | 2..1058 | 18..1053 | 4474 | 81.1 | Plus |