BDGP Sequence Production Resources |
Search the DGRC for LD41976
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 419 |
Well: | 76 |
Vector: | pOT2 |
Associated Gene/Transcript | Aats-lys-RB |
Protein status: | LD41976.pep: gold |
Sequenced Size: | 1996 |
Gene | Date | Evidence |
---|---|---|
Aats-lys-RB | 2011-10-19 | Manual selection by Ken Wan |
1996 bp assembled on 2012-04-30
GenBank Submission: BT133498.1
> LD41976.complete TTGCATGTGTGCAGTTCTGCTGATGAAATACGCTGCTTAAAATAACCATG TTCGCCCGCTGCGCCCTTAGAACCGTGCAGGGGTCATGGCCCCGATGCAG ATACACCGGAATTCAGCCACTTGCCGCCGGTTTCCACGTGAGCGCTCCGC AAATGGAGCCAAGCAAGCAGACCAAACTTGAGCTAAAGCGTCGCCTGAAG GCCGAGCAAAAGGCCAAGGAGAAGGCTGAGAAGGCGGCCGCTGCGCCGGC GGAAAATACTGCTGGCAAGAAGAAGAGCAGTGCCGCCGAGGAGGAGGAGA TCTCGCCGAATGAATACTTTAAGCTGCGCTCCGCCGCCGTTCAGGAGCTG AAACGTTCACCCGCAACGGATCCCTATCCACACAAGTTCCATGTGAGTAG CTCGCTGGAAGACTTCATTGCCAAGTACGAGAACAGCCTCAAGGAGGGCG AGACCCTGGAGAATGTCAAACTGAGCGTGGCTGGGCGCGTGCATGCCATA CGCGAGTCGGGCGCCAAGCTCATTTTCTACGATCTGCGCGGCGAGGGCGT CAAGGTGCAGGTGATGGCCAGCGCTAAGTCCTACAAGTCGGAGGCGGATT TCGAAATCGATACGTCCAAATTGCGACGTGGTGATATCATCGGCGTTGTC GGACATCCCGGCAAAACCAAGAAGGGTGAACTGTCCGTTATGCCCAGCGA GATCAAGCTGCTATCGCCCTGTCTACACATGCTGCCCCATCTGCATTTCG GGTTGAAGGACAAGGAGACGCGCTACCGCCAGCGCTATCTTGATCTCATT CTCAACAACAATGTGCGAGAGAAATTCCAGATCCGTGCCAAGATCATCTC GTACGTGCGTCAGTTCCTGGATCGTCTGGGTTTCCTGGAGATCGAGACGC CCATGATGAACATGATCGCCGGTGGAGCCACTGCCAAGCCCTTCGTGACG CATCACAATGACCTCAAGATGGATCTGTTCATGCGCATTGCTCCGGAGCT GTATCACAAGATGCTGGTGGTGGGTGGACTCGATCGTGTGTACGAGATCG GACGGCAGTTCCGCAACGAGGGCATCGACCTCACCCACAATCCTGAATTC ACCACGTGCGAGTTCTACATGGCGTATGCCGACTACGCTGACATTATGGA TATCACCGAGCAGTTGGTCTCGGGAATGGTGAAAGCGATCCGTGGCTCCT ACAAGGTCATCTATCATCCGGAGGGTCCAGAGGGACCTGAGCAAGAACTT GACTTTACGCCGCCCTTTAAGCGCGTATCCATGATCAAAACGCTGGAAGA GAAGCTGCAGGTGAAGTTCCCCGCGGCCGACACCTTCAATTCGCCAGAGA CGAATCAGTTCCTGTCTCAGCTGTGCGCTAAGCACCAGGTCGAGTGCCCA GCTCCGCGCACCACTGCCCGCCTGCTGGACAAGCTCGTCGGCGAATTCAT CGAGGAGTTTTGCGTGAATCCAACGTTCATCTGTGAGCATCCGCAGATCA TGTCGCCGCTGGCCAAGTACCATCGCAGTATTCCCGGCCTGACGGAGCGC TTCGAACTGTTTGTGGCCAAGAAGGAGATTTGCAACGCGTATACCGAGTT GAACGATCCGGTTGTGCAGCGCGAGCGTTTCGAGCAGCAGGCCAGCGACA AGGCGGCCGGCGATGATGAGGCCCAGCTGGTCGACGAGAACTTCTGCACG TCCCTGGAGTACGGACTGCCGCCCACCGGTGGTTTTGGCATGGGCATCGA TCGCCTGGCCATGTTCCTCACGGACTCCAACAACATCAAGGAGGTTCTGC TGTTCCCCGCCATGAAACCGGAGGATGCCAACCGCACGGCAGCGGAAACT GCTCCCACCGCACAGCAGTAGATGGCCAACGCCGCTCACTCCACTCAGAC CCAATCCTTGTACGTTACGCTGGTCCCGGACTAATCCCAGTTGCTAAGTT ATTCAACCAATAAACATTTTTCCCAATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 9498327..9499284 | 1798..841 | 4760 | 99.8 | Minus |
chrX | 22417052 | chrX | 9499344..9500007 | 842..179 | 3320 | 100 | Minus |
chrX | 22417052 | chrX | 9498082..9498270 | 1977..1789 | 945 | 100 | Minus |
chrX | 22417052 | chrX | 9500137..9500314 | 178..1 | 890 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 9606612..9607569 | 1798..841 | 4760 | 99.8 | Minus |
X | 23542271 | X | 9607629..9608292 | 842..179 | 3320 | 100 | Minus |
X | 23542271 | X | 9606365..9606555 | 1979..1789 | 955 | 100 | Minus |
X | 23542271 | X | 9608422..9608599 | 178..1 | 890 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 7727..7764 | 1571..1608 | 118 | 78.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9498082..9498268 | 1791..1977 | 100 | <- | Minus |
chrX | 9498335..9499282 | 843..1790 | 100 | <- | Minus |
chrX | 9499344..9500007 | 179..842 | 100 | <- | Minus |
chrX | 9500137..9500314 | 1..178 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RC | 1..1824 | 48..1871 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RB | 1..1824 | 48..1871 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RB | 1..1824 | 48..1871 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RC | 223..2199 | 1..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RB | 243..2219 | 1..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RB | 243..2219 | 1..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9606367..9606553 | 1791..1977 | 100 | <- | Minus |
X | 9606620..9607567 | 843..1790 | 100 | <- | Minus |
X | 9607629..9608292 | 179..842 | 100 | <- | Minus |
X | 9608422..9608599 | 1..178 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9606367..9606553 | 1791..1977 | 100 | <- | Minus |
X | 9606620..9607567 | 843..1790 | 100 | <- | Minus |
X | 9607629..9608292 | 179..842 | 100 | <- | Minus |
X | 9608422..9608599 | 1..178 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9606367..9606553 | 1791..1977 | 100 | <- | Minus |
X | 9606620..9607567 | 843..1790 | 100 | <- | Minus |
X | 9607629..9608292 | 179..842 | 100 | <- | Minus |
X | 9608422..9608599 | 1..178 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9500400..9500586 | 1791..1977 | 100 | <- | Minus |
arm_X | 9502455..9502632 | 1..178 | 100 | Minus | |
arm_X | 9500653..9501600 | 843..1790 | 100 | <- | Minus |
arm_X | 9501662..9502325 | 179..842 | 100 | <- | Minus |
Translation from 47 to 1870
> LD41976.hyp MFARCALRTVQGSWPRCRYTGIQPLAAGFHVSAPQMEPSKQTKLELKRRL KAEQKAKEKAEKAAAAPAENTAGKKKSSAAEEEEISPNEYFKLRSAAVQE LKRSPATDPYPHKFHVSSSLEDFIAKYENSLKEGETLENVKLSVAGRVHA IRESGAKLIFYDLRGEGVKVQVMASAKSYKSEADFEIDTSKLRRGDIIGV VGHPGKTKKGELSVMPSEIKLLSPCLHMLPHLHFGLKDKETRYRQRYLDL ILNNNVREKFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFV THHNDLKMDLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPE FTTCEFYMAYADYADIMDITEQLVSGMVKAIRGSYKVIYHPEGPEGPEQE LDFTPPFKRVSMIKTLEEKLQVKFPAADTFNSPETNQFLSQLCAKHQVEC PAPRTTARLLDKLVGEFIEEFCVNPTFICEHPQIMSPLAKYHRSIPGLTE RFELFVAKKEICNAYTELNDPVVQRERFEQQASDKAAGDDEAQLVDENFC TSLEYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFPAMKPEDANRTAAE TAPTAQQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Aats-lys-PC | 607 | CG12141-PC | 1..607 | 1..607 | 3150 | 100 | Plus |
Aats-lys-PB | 607 | CG12141-PB | 1..607 | 1..607 | 3150 | 100 | Plus |
Aats-lys-PA | 574 | CG12141-PA | 9..574 | 42..607 | 2915 | 99.6 | Plus |
CG31739-PC | 1082 | CG31739-PC | 340..654 | 55..372 | 195 | 24.5 | Plus |
CG31739-PB | 1082 | CG31739-PB | 340..654 | 55..372 | 195 | 24.5 | Plus |
Translation from 47 to 1870
> LD41976.pep MFARCALRTVQGSWPRCRYTGIQPLAAGFHVSAPQMEPSKQTKLELKRRL KAEQKAKEKAEKAAAAPAENTAGKKKSSAAEEEEISPNEYFKLRSAAVQE LKRSPATDPYPHKFHVSSSLEDFIAKYENSLKEGETLENVKLSVAGRVHA IRESGAKLIFYDLRGEGVKVQVMASAKSYKSEADFEIDTSKLRRGDIIGV VGHPGKTKKGELSVMPSEIKLLSPCLHMLPHLHFGLKDKETRYRQRYLDL ILNNNVREKFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFV THHNDLKMDLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPE FTTCEFYMAYADYADIMDITEQLVSGMVKAIRGSYKVIYHPEGPEGPEQE LDFTPPFKRVSMIKTLEEKLQVKFPAADTFNSPETNQFLSQLCAKHQVEC PAPRTTARLLDKLVGEFIEEFCVNPTFICEHPQIMSPLAKYHRSIPGLTE RFELFVAKKEICNAYTELNDPVVQRERFEQQASDKAAGDDEAQLVDENFC TSLEYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFPAMKPEDANRTAAE TAPTAQQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22422-PA | 580 | GF22422-PA | 57..580 | 85..607 | 2666 | 93.3 | Plus |
Dana\GF15370-PA | 1132 | GF15370-PA | 501..722 | 160..374 | 201 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18967-PA | 574 | GG18967-PA | 9..574 | 42..607 | 2958 | 97.3 | Plus |
Dere\GG22777-PA | 1145 | GG22777-PA | 546..715 | 206..374 | 190 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17710-PA | 582 | GH17710-PA | 9..580 | 42..607 | 2663 | 85.7 | Plus |
Dgri\GH21379-PA | 533 | GH21379-PA | 207..525 | 238..587 | 199 | 23.3 | Plus |
Dgri\GH13102-PA | 1125 | GH13102-PA | 498..667 | 206..374 | 182 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
LysRS-PC | 607 | CG12141-PC | 1..607 | 1..607 | 3150 | 100 | Plus |
LysRS-PB | 607 | CG12141-PB | 1..607 | 1..607 | 3150 | 100 | Plus |
LysRS-PA | 574 | CG12141-PA | 9..574 | 42..607 | 2915 | 99.6 | Plus |
AspRS-m-PC | 1082 | CG31739-PC | 340..654 | 55..372 | 195 | 24.5 | Plus |
AspRS-m-PB | 1082 | CG31739-PB | 340..654 | 55..372 | 195 | 24.5 | Plus |
AspRS-m-PA | 1082 | CG31739-PA | 340..654 | 55..372 | 195 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15452-PA | 554 | GI15452-PA | 9..550 | 42..581 | 2461 | 86.7 | Plus |
Dmoj\GI14195-PA | 1190 | GI14195-PA | 561..756 | 206..418 | 184 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27002-PA | 518 | GL27002-PA | 170..500 | 266..596 | 1720 | 92.4 | Plus |
Dper\GL27002-PA | 518 | GL27002-PA | 9..173 | 42..203 | 554 | 70.5 | Plus |
Dper\GL18794-PA | 1091 | GL18794-PA | 436..683 | 160..418 | 183 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11433-PA | 584 | GA11433-PA | 9..566 | 42..596 | 2610 | 86.9 | Plus |
Dpse\GA16436-PA | 1106 | GA16436-PA | 451..698 | 160..418 | 183 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11355-PA | 574 | GM11355-PA | 9..574 | 42..607 | 2975 | 98.1 | Plus |
Dsec\GM17213-PA | 1088 | GM17213-PA | 493..714 | 160..374 | 200 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16054-PA | 610 | GD16054-PA | 11..610 | 8..607 | 3164 | 97.8 | Plus |
Dsim\GD24088-PA | 887 | GD24088-PA | 493..714 | 160..374 | 198 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19167-PA | 580 | GJ19167-PA | 9..576 | 42..607 | 2588 | 86 | Plus |
Dvir\GJ17510-PA | 1132 | GJ17510-PA | 443..689 | 158..418 | 185 | 24.5 | Plus |