BDGP Sequence Production Resources |
Search the DGRC for LD41978
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 419 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11964-RA |
Protein status: | LD41978.pep: gold |
Preliminary Size: | 1919 |
Sequenced Size: | 1872 |
Gene | Date | Evidence |
---|---|---|
CG11964 | 2001-01-01 | Release 2 assignment |
CG11964 | 2001-07-04 | Blastp of sequenced clone |
CG11964 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11964 | 2008-04-29 | Release 5.5 accounting |
CG11964 | 2008-08-15 | Release 5.9 accounting |
CG11964 | 2008-12-18 | 5.12 accounting |
1872 bp (1872 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051943
> LD41978.complete AATGGACATCGGCGAACTGCTGGCGTTTAAGCCGGAACAGACGCCAAAGC GTCCGCACGACGACGAGGACGATGAATTCGATTTGGCGAGCTCGCACGGA AAACGGGGCGGTGTCGATGAGAAAACCAAACGCATGCGGCGCATCGCCGA TGCCAAGGAGTCCGCACACTATGTCAAGCAAAGTGGAGGAGCCACCGGTG GCAGTGGCACTTCCGCCTTTGAATTCGATCCGGAACTGACAGAGGAGGAA CGCCTGAACATCCTGAAGTACGTGGAGAACGAGGAGGCCGATGGCGATGT TCTGGATGAGCAGAGCCTGAAGAAACTGATACTGGTGTTCGAGAAGCGTA ACTTGAAGAACCAGGAGATGCGCATCAAGTTTGCCGACAGTCCCGAGAAG TTCATGGACTCCGAGGTGGAGCTGCACACGGTAATCCAGGAGCTGAAGGG CGTGGCCACGGTGCCCGATCTGTATCCAATTCTCGTGGATCTGCACGGCC TGCACAGTTTGCTCGAACTGCTGGCACATCAGAACACAGACATAGCCGTG GCCGTGGTAGATCTGCTGCAAGAAGTGACCGATGTTGATATCCTGGGCGA AAGTCAAGAGGGTGCCGAATCCTTGATTGAAGCACTGAGAAAAGAGCAAA TCTGTGCTCTGCTTGTCCAGAATCTGGAGCGACTGAACGAACAGGTTAAG GAGGAAGCCGATGGCGTGCATAATACGCTGGCCATAGTGGAAAATCTTAC CGAAATCGATTCGGAATTCGTGAAGGAAGCCGCTGAACAGGGACTGCTCG CCTGGCTGCTGAAACGGCTGCGCGGCAAGTCGCCCTTCGATCCCAACAAA CTCTACTGCAGCGAGATACTTTCCATACTTATACAAACGGAGAACGAGAA CCGATTACTGCTGGGTTCTCTGGATGGCGTGGATGTGCTGCTCCAGCAGC TGGCTGTCTACAAGAGACACGATCCCGCTAGCAACGAGGAGCAGGAGTAC ATGCAGAACCTCTTCAATTGCCTTTGTTCCGCTCTGATGGCCCGCGAGAA TCGCGATCGTTTTCTCAGCGGCGAGGGTCTGCAGCTGATGAACCTAATGC TGCGCGAGAAGAAGATGTCTAGAAATGGATCGCTCAAGGTGTTGGATCAT GCCATGGCTGGCCAGGATGGCAGAGACAACTGCAACAAGTTTGTCGAAAT TCTCGGCTTGCGCACCATCTTCCCACTCTTTATGAAAACCCCCAAGCGCA ACAAGCAGCGCCTAATCTCCGCCGATGAGCATGAGGAGCATGTGACCTCC GTAATCGCATCAATGTTGCGAAACTGCAAGGGCACACACCGCCAGCGAAT GTTGGCCAAGTTCACGGAGAATGATCACGAGAAGGTGGATCGCCTGCTGG AGCTGCACCTCAAGTATCTGGCCAAGGTGGAAGCCATAGACAAGGAGATC GATCAGCAGGCTAAGGATCCCACCATTGATGAGGACGAGGAGGCGGAGAA TAACTATATAAAACGACTGACCGGCGGGCTGTTCACGCTGCAGCGCATCG ACTACATCCTGCTGGAGGTCAGTGCCACTGGCGACACCGTCAAGCAGCGT GTACTGCAGATCCTTAACTTGCGCGGCGCTTCCATGAAGACCATTCGCAG CATAATGAGGGAATACGCTGGCAACCTGGGCGATGGCGACACCGACTGGC GGGAACAGGAGCAGAACCACATATTATCTCTAGTCGATCGTTTCTAAGGC TCAACACACAATAAACAAAACATAAATATTATGAAAATCTTTAAAAATGT GGCGGGTCAGAAGTTTACATCTGAAATTTGAGATTAAAATTTTGAACAAT GAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 4769397..4770833 | 1466..30 | 7125 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 4769138..4769335 | 1661..1464 | 990 | 100 | Minus |
chr3R | 27901430 | chr3R | 4768887..4769077 | 1851..1661 | 940 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 8943464..8944900 | 1466..30 | 7185 | 100 | Minus |
3R | 32079331 | 3R | 8943205..8943402 | 1661..1464 | 990 | 100 | Minus |
3R | 32079331 | 3R | 8942951..8943144 | 1854..1661 | 970 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 8684295..8685731 | 1466..30 | 7185 | 100 | Minus |
3R | 31820162 | 3R | 8684036..8684233 | 1661..1464 | 990 | 100 | Minus |
3R | 31820162 | 3R | 8683782..8683975 | 1854..1661 | 970 | 100 | Minus |
3R | 31820162 | 3R | 8685787..8685817 | 31..1 | 155 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 1508..1568 | 1737..1797 | 116 | 65.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4768887..4769076 | 1662..1851 | 99 | <- | Minus |
chr3R | 4769138..4769333 | 1466..1661 | 100 | <- | Minus |
chr3R | 4769398..4770831 | 32..1465 | 99 | <- | Minus |
chr3R | 4770889..4770919 | 1..31 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11964-RA | 1..1746 | 2..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11964-RA | 1..1746 | 2..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11964-RA | 1..1746 | 2..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11964-RA | 1..1746 | 2..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11964-RA | 1..1746 | 2..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11964-RA | 19..1869 | 1..1851 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11964-RA | 30..1880 | 1..1851 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11964-RA | 35..1885 | 1..1851 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11964-RA | 19..1869 | 1..1851 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11964-RA | 35..1885 | 1..1851 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8942954..8943143 | 1662..1851 | 100 | <- | Minus |
3R | 8943205..8943400 | 1466..1661 | 100 | <- | Minus |
3R | 8943465..8944898 | 32..1465 | 100 | <- | Minus |
3R | 8944956..8944986 | 1..31 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8942954..8943143 | 1662..1851 | 100 | <- | Minus |
3R | 8943205..8943400 | 1466..1661 | 100 | <- | Minus |
3R | 8943465..8944898 | 32..1465 | 100 | <- | Minus |
3R | 8944956..8944986 | 1..31 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8942954..8943143 | 1662..1851 | 100 | <- | Minus |
3R | 8943205..8943400 | 1466..1661 | 100 | <- | Minus |
3R | 8943465..8944898 | 32..1465 | 100 | <- | Minus |
3R | 8944956..8944986 | 1..31 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4768676..4768865 | 1662..1851 | 100 | <- | Minus |
arm_3R | 4768927..4769122 | 1466..1661 | 100 | <- | Minus |
arm_3R | 4769187..4770620 | 32..1465 | 100 | <- | Minus |
arm_3R | 4770678..4770708 | 1..31 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8683785..8683974 | 1662..1851 | 100 | <- | Minus |
3R | 8684036..8684231 | 1466..1661 | 100 | <- | Minus |
3R | 8684296..8685729 | 32..1465 | 100 | <- | Minus |
3R | 8685787..8685817 | 1..31 | 100 | Minus |
Translation from 0 to 1746
> LD41978.hyp MDIGELLAFKPEQTPKRPHDDEDDEFDLASSHGKRGGVDEKTKRMRRIAD AKESAHYVKQSGGATGGSGTSAFEFDPELTEEERLNILKYVENEEADGDV LDEQSLKKLILVFEKRNLKNQEMRIKFADSPEKFMDSEVELHTVIQELKG VATVPDLYPILVDLHGLHSLLELLAHQNTDIAVAVVDLLQEVTDVDILGE SQEGAESLIEALRKEQICALLVQNLERLNEQVKEEADGVHNTLAIVENLT EIDSEFVKEAAEQGLLAWLLKRLRGKSPFDPNKLYCSEILSILIQTENEN RLLLGSLDGVDVLLQQLAVYKRHDPASNEEQEYMQNLFNCLCSALMAREN RDRFLSGEGLQLMNLMLREKKMSRNGSLKVLDHAMAGQDGRDNCNKFVEI LGLRTIFPLFMKTPKRNKQRLISADEHEEHVTSVIASMLRNCKGTHRQRM LAKFTENDHEKVDRLLELHLKYLAKVEAIDKEIDQQAKDPTIDEDEEAEN NYIKRLTGGLFTLQRIDYILLEVSATGDTVKQRVLQILNLRGASMKTIRS IMREYAGNLGDGDTDWREQEQNHILSLVDRF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11964-PA | 581 | CG11964-PA | 1..581 | 1..581 | 2949 | 100 | Plus |
Translation from 1 to 1746
> LD41978.pep MDIGELLAFKPEQTPKRPHDDEDDEFDLASSHGKRGGVDEKTKRMRRIAD AKESAHYVKQSGGATGGSGTSAFEFDPELTEEERLNILKYVENEEADGDV LDEQSLKKLILVFEKRNLKNQEMRIKFADSPEKFMDSEVELHTVIQELKG VATVPDLYPILVDLHGLHSLLELLAHQNTDIAVAVVDLLQEVTDVDILGE SQEGAESLIEALRKEQICALLVQNLERLNEQVKEEADGVHNTLAIVENLT EIDSEFVKEAAEQGLLAWLLKRLRGKSPFDPNKLYCSEILSILIQTENEN RLLLGSLDGVDVLLQQLAVYKRHDPASNEEQEYMQNLFNCLCSALMAREN RDRFLSGEGLQLMNLMLREKKMSRNGSLKVLDHAMAGQDGRDNCNKFVEI LGLRTIFPLFMKTPKRNKQRLISADEHEEHVTSVIASMLRNCKGTHRQRM LAKFTENDHEKVDRLLELHLKYLAKVEAIDKEIDQQAKDPTIDEDEEAEN NYIKRLTGGLFTLQRIDYILLEVSATGDTVKQRVLQILNLRGASMKTIRS IMREYAGNLGDGDTDWREQEQNHILSLVDRF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17276-PA | 582 | GF17276-PA | 1..582 | 1..581 | 2711 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17409-PA | 581 | GG17409-PA | 1..581 | 1..581 | 2989 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22182-PA | 589 | GH22182-PA | 1..589 | 1..581 | 2694 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11964-PA | 581 | CG11964-PA | 1..581 | 1..581 | 2949 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22703-PA | 586 | GI22703-PA | 1..586 | 1..581 | 2713 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22278-PA | 581 | GL22278-PA | 1..581 | 1..581 | 2725 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11299-PA | 581 | GA11299-PA | 1..581 | 1..581 | 2716 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26298-PA | 581 | GM26298-PA | 1..581 | 1..581 | 3040 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20833-PA | 581 | GD20833-PA | 1..581 | 1..581 | 3045 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23432-PA | 588 | GJ23432-PA | 1..588 | 1..581 | 2691 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11115-PA | 582 | GK11115-PA | 1..582 | 1..581 | 2719 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24812-PA | 581 | GE24812-PA | 1..581 | 1..581 | 3007 | 97.9 | Plus |