BDGP Sequence Production Resources |
Search the DGRC for LD42024
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 420 |
Well: | 24 |
Vector: | pOT2 |
Associated Gene/Transcript | CG17600-RA |
Protein status: | LD42024.pep: gold |
Preliminary Size: | 2348 |
Sequenced Size: | 2302 |
Gene | Date | Evidence |
---|---|---|
CG17600 | 2001-01-01 | Release 2 assignment |
CG17602 | 2001-01-01 | Release 2 assignment |
CG17596 | 2001-01-01 | Release 2 assignment |
CG17600 | 2001-09-19 | Blastp of sequenced clone |
CG17600 | 2008-04-29 | Release 5.5 accounting |
CG17600 | 2008-08-15 | Release 5.9 accounting |
CG17600 | 2008-12-18 | 5.12 accounting |
2302 bp (2302 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058699
> LD42024.complete TGAAATGGAATTTGTTGAATTTTAATTGCACGCAGCACGCTGCCGGCGAA AACAACAGCAAAATTAGCGGGCTGATTTCATTCAACCTGAGATAAAGCAA CAATAATAGCGCACAACACATCGCAAAGGCGCAGCAGGAGAAAATAGCTG ATAAATAGACAATAATAAATAAATATTACACACAAAGGCCAGGGACGCCG CTTTAATTAGACTTGTCAATGAATCAGTGACATCACCGATCATCATAACC CAATCATCTCAGCCAATCAGCAGAAATGACAGAGACCAGTAATCAGCAGC CTGGCGGCGAAGATTTCAATGGCCGCCACTCGGCATCGCCGGCCCGCACC ATTGATTCGCATGATTCCACCACCGGCAGCATGGATACCATTGTGGATCG CAGCCTGAATCCTGAGGAACTCCATCAGGTGGTGACCACCATCGAACATA GCACGAATACCACGAACTTGGCGGGATCGGGCGGTAGTCTGACCAACTCG CAAATCGGCATGCTTCAACGGGATGAGAATCGAAAACAGCAGGAGGACCA GGAGCAGGCGCGCCAGGATGCCCAAAGTCACATCTATTCGAGTCCTGTCT ACGATGAGAAGCCGCCGGCGGTGAAACTCCTATCCGCCGCCCTAGACTTG GATGCCCAAAAATCCCAGGCAAACAATGATGACGATAATAAGCCCAATCT TATTTCGCACCAAGAGTTCAAACAACAGCTGCAGGAAGCTATTGCTTCGC GGCAACCAAACCAGGTGAATGGCACTAAGAGTGGGGCCACCACTTTGGAC TCCAGGATCAGTCGTAAACAGCGCTGTCCACCGGAATTTATTAAGTACAA GGAGGGCAGCGAGGGTGGAGGCAGTGGCTCATCGCTTTCCTCGAAAGATC GGCGCAAGCGCAAGGCGAGCAATGAATGCTGCTCGGCATTTCCACTGCAA ATAGTGTTGGGCACTCTCCAGTTGCTCCTGGCCATATCGCTGGTGGCCCT GGGATCACTTCTGATCGTCCGAGAGGCAGCGCTCTCACTGGCGGGATGCG GCATCTGGACGGGATTGATAGCAGCCGTTACGGGCTCCCTTGGAGTGGTG AGCATGCGCAAAACCCAGACAGCGTTTTTGGCCCTCAGTTTGGTCTGCAT CGCCAGCAGCACCCTGGCTCTGGCTATTTCCGGCGTGGGATTGTCAAGGG ACCTCAACAGGATGGCGGAGCAAAAGGGTGAACAGTTCGACTTGATCGAT ACCAACAGCGAGGTTTCCGCTGCCTGCGGCCTAATTTTTGCCCTGTTTCT TCATTTTGTGGTCAGTATTGTATCCGTCTATCGTTGCGCCCTTCAGATTT GCACTAAGTCGGAACATAGTGAGCTTCGCGACGTGATTATCAAGTCGAAT GCTTCGGGAATCGCTCTGGACCAACAGAAGGTGGACCAGTACATCAAGGC GATGTCTCTGAATGGCAGTGAAAAGGTGAACACCGAGAAGCTAGCGGCTA TGTGGATGTATGCCACCCAGATGGGAAGCCTGCCGCCAACAGTCCGCAAA CTGACGCCTCCATCGCGGCAGATCATGCTCATTCCCTCCACCGCTGGCAA TGGGATGGCACCACCACCGCCCACACGCTTGCCACCTCCGCCTCCGGGCG CCAGAGCTGGACTTCTGCTTCCCGTGCCCCCGCTGCCGGCGCAGTACCGT GGAATGACCCTTCCCTACATGCGACCTGGGCCCGGATCCGTGACCTACGC CCACCCGGCTAGCCTAAGCGGGACATACCGGACTCACAAGAGCACAAAGT CAGCGGAGATCAATGGGCAGCGAAGACGGCGGCGGGCGGGAAAGTCTGAT GCCAATCGCCGGCAGCGCCGAAAATCGGAAGCGGATGTCCTGGACGGTGC TCCCAATTTCCAGTATACGGGTCTAGATCGAGCCATAGCTGATAGCTTTT TGGCCAGGCAAGAACAGTCACAGGCGGGCAGTCACGTCGACTATTCGTCG TCTGCCTCCTCGGACTTGTACGGCGGTCAGAGGGCATCCTTCAAAACGAA GATCGTTTGCCGGGATGTGGTGATGTGACGGGAAAAGCATCCGCTCTCTA GTTCCCAGTTTCCCAGACTTTTGTATATATTTTTTTTACGGAGCCACAAC GAAATCCCATCTATGTGGGGCTTTGTCTGATAAATTACCCCTTTTATATC CATTACTCTATCAATGTACTTACATATGCGTATAGCTCTTAAGACACATT AAAATTAATCGAATAAAGATATATTAAGCAAACTAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17600-RA | 2562 | CG17600-RA | 188..2472 | 1..2285 | 11425 | 100 | Plus |
CG17600.b | 1046 | CG17600.b | 71..998 | 1358..2285 | 4640 | 100 | Plus |
CG17600.c | 1127 | CG17600.c | 316..1127 | 1473..2284 | 4060 | 100 | Plus |
CG17600.c | 1127 | CG17600.c | 1..311 | 1167..1477 | 1555 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 21937310..21937990 | 1604..2284 | 3405 | 100 | Plus |
chrX | 22417052 | chrX | 21923995..21924549 | 212..766 | 2775 | 100 | Plus |
chrX | 22417052 | chrX | 21924705..21925178 | 762..1235 | 2370 | 100 | Plus |
chrX | 22417052 | chrX | 21911349..21911559 | 1..211 | 1055 | 100 | Plus |
chrX | 22417052 | chrX | 21936904..21937034 | 1474..1604 | 655 | 100 | Plus |
chrX | 22417052 | chrX | 21925234..21925359 | 1234..1359 | 630 | 100 | Plus |
chrX | 22417052 | chrX | 21936726..21936845 | 1358..1477 | 600 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 22541344..22542025 | 1604..2285 | 3410 | 100 | Plus |
X | 23542271 | X | 22528029..22528583 | 212..766 | 2775 | 100 | Plus |
X | 23542271 | X | 22528739..22529212 | 762..1235 | 2370 | 100 | Plus |
X | 23542271 | X | 22515383..22515593 | 1..211 | 1055 | 100 | Plus |
X | 23542271 | X | 22540938..22541068 | 1474..1604 | 655 | 100 | Plus |
X | 23542271 | X | 22529268..22529393 | 1234..1359 | 630 | 100 | Plus |
X | 23542271 | X | 22540760..22540879 | 1358..1477 | 600 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 22526436..22527117 | 1604..2285 | 3410 | 100 | Plus |
X | 23527363 | X | 22513121..22513675 | 212..766 | 2775 | 100 | Plus |
X | 23527363 | X | 22513831..22514304 | 762..1235 | 2370 | 100 | Plus |
X | 23527363 | X | 22500475..22500685 | 1..211 | 1055 | 100 | Plus |
X | 23527363 | X | 22526030..22526160 | 1474..1604 | 655 | 100 | Plus |
X | 23527363 | X | 22514360..22514485 | 1234..1359 | 630 | 100 | Plus |
X | 23527363 | X | 22525852..22525971 | 1358..1477 | 600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 21911349..21911559 | 1..211 | 100 | -> | Plus |
chrX | 21923995..21924547 | 212..764 | 100 | -> | Plus |
chrX | 21924708..21925178 | 765..1235 | 100 | -> | Plus |
chrX | 21925236..21925357 | 1236..1357 | 100 | -> | Plus |
chrX | 21936726..21936843 | 1358..1475 | 100 | -> | Plus |
chrX | 21936906..21937034 | 1476..1604 | 100 | -> | Plus |
chrX | 21937311..21937990 | 1605..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 1..1803 | 276..2078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 1..1803 | 276..2078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 1..1803 | 276..2078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 1..1803 | 276..2078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 1..1803 | 276..2078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 185..2468 | 1..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 185..2468 | 1..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 187..2470 | 1..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 185..2468 | 1..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 187..2470 | 1..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22515383..22515593 | 1..211 | 100 | -> | Plus |
X | 22528029..22528581 | 212..764 | 100 | -> | Plus |
X | 22528742..22529212 | 765..1235 | 100 | -> | Plus |
X | 22529270..22529391 | 1236..1357 | 100 | -> | Plus |
X | 22540760..22540877 | 1358..1475 | 100 | -> | Plus |
X | 22540940..22541068 | 1476..1604 | 100 | -> | Plus |
X | 22541345..22542024 | 1605..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22515383..22515593 | 1..211 | 100 | -> | Plus |
X | 22528029..22528581 | 212..764 | 100 | -> | Plus |
X | 22528742..22529212 | 765..1235 | 100 | -> | Plus |
X | 22529270..22529391 | 1236..1357 | 100 | -> | Plus |
X | 22540760..22540877 | 1358..1475 | 100 | -> | Plus |
X | 22540940..22541068 | 1476..1604 | 100 | -> | Plus |
X | 22541345..22542024 | 1605..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22515383..22515593 | 1..211 | 100 | -> | Plus |
X | 22528029..22528581 | 212..764 | 100 | -> | Plus |
X | 22528742..22529212 | 765..1235 | 100 | -> | Plus |
X | 22529270..22529391 | 1236..1357 | 100 | -> | Plus |
X | 22540760..22540877 | 1358..1475 | 100 | -> | Plus |
X | 22540940..22541068 | 1476..1604 | 100 | -> | Plus |
X | 22541345..22542024 | 1605..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 21917219..21917429 | 1..211 | 100 | -> | Plus |
arm_X | 21929865..21930417 | 212..764 | 100 | -> | Plus |
arm_X | 21930578..21931048 | 765..1235 | 100 | -> | Plus |
arm_X | 21931106..21931227 | 1236..1357 | 100 | -> | Plus |
arm_X | 21942596..21942713 | 1358..1475 | 100 | -> | Plus |
arm_X | 21942776..21942904 | 1476..1604 | 100 | -> | Plus |
arm_X | 21943181..21943860 | 1605..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22500475..22500685 | 1..211 | 100 | -> | Plus |
X | 22513121..22513673 | 212..764 | 100 | -> | Plus |
X | 22513834..22514304 | 765..1235 | 100 | -> | Plus |
X | 22514362..22514483 | 1236..1357 | 100 | -> | Plus |
X | 22525852..22525969 | 1358..1475 | 100 | -> | Plus |
X | 22526032..22526160 | 1476..1604 | 100 | -> | Plus |
X | 22526437..22527116 | 1605..2284 | 100 | Plus |
Translation from 275 to 2077
> LD42024.pep MTETSNQQPGGEDFNGRHSASPARTIDSHDSTTGSMDTIVDRSLNPEELH QVVTTIEHSTNTTNLAGSGGSLTNSQIGMLQRDENRKQQEDQEQARQDAQ SHIYSSPVYDEKPPAVKLLSAALDLDAQKSQANNDDDNKPNLISHQEFKQ QLQEAIASRQPNQVNGTKSGATTLDSRISRKQRCPPEFIKYKEGSEGGGS GSSLSSKDRRKRKASNECCSAFPLQIVLGTLQLLLAISLVALGSLLIVRE AALSLAGCGIWTGLIAAVTGSLGVVSMRKTQTAFLALSLVCIASSTLALA ISGVGLSRDLNRMAEQKGEQFDLIDTNSEVSAACGLIFALFLHFVVSIVS VYRCALQICTKSEHSELRDVIIKSNASGIALDQQKVDQYIKAMSLNGSEK VNTEKLAAMWMYATQMGSLPPTVRKLTPPSRQIMLIPSTAGNGMAPPPPT RLPPPPPGARAGLLLPVPPLPAQYRGMTLPYMRPGPGSVTYAHPASLSGT YRTHKSTKSAEINGQRRRRRAGKSDANRRQRRKSEADVLDGAPNFQYTGL DRAIADSFLARQEQSQAGSHVDYSSSASSDLYGGQRASFKTKIVCRDVVM *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21005-PA | 257 | GF21005-PA | 14..257 | 362..600 | 964 | 91 | Plus |
Dana\GF18979-PA | 77 | GF18979-PA | 1..44 | 277..320 | 222 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19749-PA | 361 | GG19749-PA | 1..361 | 1..361 | 1677 | 92.3 | Plus |
Dere\GG19751-PA | 261 | GG19751-PA | 1..261 | 338..600 | 1112 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24077-PA | 784 | GH24077-PA | 17..363 | 16..362 | 1177 | 72.9 | Plus |
Dgri\GH24078-PA | 221 | GH24078-PA | 1..221 | 393..600 | 598 | 67.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17600-PA | 600 | CG17600-PA | 1..600 | 1..600 | 3044 | 100 | Plus |
CG17600-PD | 603 | CG17600-PD | 1..603 | 1..600 | 3030 | 99.5 | Plus |
CG17600-PC | 208 | CG17600-PC | 1..208 | 393..600 | 1083 | 100 | Plus |
CG17600-PB | 208 | CG17600-PB | 1..208 | 393..600 | 1083 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14475-PA | 1196 | GI14475-PA | 1..365 | 1..362 | 1196 | 68.2 | Plus |
Dmoj\GI14476-PA | 256 | GI14476-PA | 27..256 | 361..600 | 597 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13300-PA | 391 | GL13300-PA | 1..391 | 1..361 | 1051 | 63.7 | Plus |
Dper\GL13303-PA | 244 | GL13303-PA | 1..244 | 358..600 | 1024 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14574-PA | 402 | GA14574-PA | 1..402 | 1..361 | 1314 | 72.7 | Plus |
Dpse\GA22829-PA | 248 | GA22829-PA | 9..248 | 362..600 | 1017 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11734-PA | 361 | GM11734-PA | 1..361 | 1..361 | 1736 | 95.3 | Plus |
Dsec\GM11737-PA | 238 | GM11737-PA | 4..238 | 362..600 | 1023 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17549-PA | 361 | GD17549-PA | 1..361 | 1..361 | 1729 | 95 | Plus |
Dsim\GD17551-PA | 261 | GD17551-PA | 7..245 | 358..600 | 982 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18812-PA | 1257 | GJ18812-PA | 1..378 | 1..362 | 1305 | 74 | Plus |
Dvir\GJ18813-PA | 250 | GJ18813-PA | 7..250 | 362..600 | 940 | 83.1 | Plus |
Translation from 275 to 2077
> LD42024.hyp MTETSNQQPGGEDFNGRHSASPARTIDSHDSTTGSMDTIVDRSLNPEELH QVVTTIEHSTNTTNLAGSGGSLTNSQIGMLQRDENRKQQEDQEQARQDAQ SHIYSSPVYDEKPPAVKLLSAALDLDAQKSQANNDDDNKPNLISHQEFKQ QLQEAIASRQPNQVNGTKSGATTLDSRISRKQRCPPEFIKYKEGSEGGGS GSSLSSKDRRKRKASNECCSAFPLQIVLGTLQLLLAISLVALGSLLIVRE AALSLAGCGIWTGLIAAVTGSLGVVSMRKTQTAFLALSLVCIASSTLALA ISGVGLSRDLNRMAEQKGEQFDLIDTNSEVSAACGLIFALFLHFVVSIVS VYRCALQICTKSEHSELRDVIIKSNASGIALDQQKVDQYIKAMSLNGSEK VNTEKLAAMWMYATQMGSLPPTVRKLTPPSRQIMLIPSTAGNGMAPPPPT RLPPPPPGARAGLLLPVPPLPAQYRGMTLPYMRPGPGSVTYAHPASLSGT YRTHKSTKSAEINGQRRRRRAGKSDANRRQRRKSEADVLDGAPNFQYTGL DRAIADSFLARQEQSQAGSHVDYSSSASSDLYGGQRASFKTKIVCRDVVM *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17600-PA | 600 | CG17600-PA | 1..600 | 1..600 | 3044 | 100 | Plus |
CG17600-PD | 603 | CG17600-PD | 1..603 | 1..600 | 3030 | 99.5 | Plus |
CG17600-PC | 208 | CG17600-PC | 1..208 | 393..600 | 1083 | 100 | Plus |
CG17600-PB | 208 | CG17600-PB | 1..208 | 393..600 | 1083 | 100 | Plus |