BDGP Sequence Production Resources |
Search the DGRC for LD42035
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 420 |
Well: | 35 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5126-RA |
Protein status: | LD42035.pep: gold |
Preliminary Size: | 1697 |
Sequenced Size: | 1663 |
Gene | Date | Evidence |
---|---|---|
CG5126 | 2001-01-01 | Release 2 assignment |
CG5126 | 2001-07-04 | Blastp of sequenced clone |
CG5126 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5126 | 2008-04-29 | Release 5.5 accounting |
CG5126 | 2008-08-15 | Release 5.9 accounting |
CG5126 | 2008-12-18 | 5.12 accounting |
1663 bp (1663 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051944
> LD42035.complete AAATATACACCTACTTGCGTATATTGTCAGTTAAGATTACCCATTCAGAT AGCAATTGATTCCTGCGTGGAGGTCACGATGTCGACGCAACAGCAGCAGT TAGACTATATAGAGCGCCACCTGGTGTACGACATCTTCAAGAACTTTGGT CCGAGTGCTTCGCTGGAATCGCACAGCGTTGAGTGCTCCAATGGACTGGA CGGCTTCATGTCCGCCTTGTACACCGTTACGCTGGACGTGGTCATCGCCG AGCGCAAGCGGACGGAGGTCGTCCTGGTCAAATTCATGAAGGGAACGGAA GAGTTCCGGGAGAGCAGCAACTCGTACATCCAGTTTTCCAACGAGATCTT CGCCTACGCCGAGATCCTGCCCGCCTATGAGAATGTGCTTCGGACGAGTC ACCTGGAAAGCGAAGTGGTAAAGAACTGGGTTCCCTGTTGCTACTTCGCC AGGTTTGGCCACGTTGAAGGTTTAGGGAATGGTAGGGAATCGGTGCTGGC CCTAAAGCATCTCAAGGGCGATGGCTACCAATTGGGGCCAAGGCTAACCC TTCGACGGGATCAGCTGGAGGCCATGGTAGGACTAGTGGGTCCGTTCCAT GCTCTGGGCTACGCCACGAAAATCCTCCAGCCGAACGTTCATGCTCGTTT GCGCGCCGGAGTGGTGGACATGCCCTTCGTGTCCAGCTCAGGAAAGGGCA TCTTTGATGTCCTCTATCGCGTGGCTTTCGATCGGTTCTACGAGTTCTAC GACCGGCAAAAGGAGCAGCTCCTCCAGGGGGCAGACCCCGGATTCGGGGC CGCCATCGAGCGACTGCGGGAGAAGTACTTCAAGCAGCCAACTCTCCTGC TGGAGAGAATCCGCACCAGCTCCTTTGCCGAAGATCAACCGGACAGCCAC TTTGCCACCTTTCTGCACGGCGACTACAACAGGAACAACGTGCTGTTCCA CTACGGCGCTGAAGATAAGGTGGACGCTATCAAAGCCATCGATTTCCAGG AGCTGCGCTTCAGCACTACGGCCATTGACCTGAGCTTCTTTATGTACATG AACACGCCATCCGAAGGAAGGAAGGAGATCTACGCCGACTTGTTGCGCAA GTACCATCGAAGCATGATCGAAATGTTGGAACTGGTTCTGCGCCGAAACC GGAACGAGTTGACCGACGATCGGGTGGACCAGTTGCTACAGGAATACAGC TTCGAACGCTTCAATGCCCACTTCAAACGATATGCCTTCTACGGACCAAT GGTATGCATGCACTTCCTTCCCTGGCTGCTCGGCACCGAGAAGGATTGCG CCGAGTTGTCCCGCCTCTTCGAGACGGATATGCACGGCCCCGCCTTCCAC CAGTTGTCCTTGGACATCGCTGGCGATGAGGCGAACCAGGAGATCTTCAA GACCGTTCGTCACGCCTATGAGCATGGCTACATGGACGAGATTTAGATTC CCTTGCACAATTCCATACTTAAAGCATTTACAATTTAAATTTAAACCTAA TTTGAGACTGTATTTACGAACTATTTACAATTTGAACTTCGCAACTAATG CTAAATGAACGCGACAAGGTGGAGGAAGTGTAATCGAGGTAAACAACAAT GCTTAAATGCCCCTATATTCAAGCGGAATAAAATCATACACTTTAAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5126-RA | 1795 | CG5126-RA | 60..1705 | 1..1646 | 8230 | 100 | Plus |
CG4896-RE | 3756 | CG4896-RE | 3592..3756 | 1646..1482 | 825 | 100 | Minus |
CG4896-RD | 3176 | CG4896-RD | 3017..3176 | 1646..1487 | 800 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1293..1366 | 1539..1460 | 116 | 65 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 1182247..1183421 | 470..1644 | 99 | <- | Minus |
chr2L | 1183479..1183947 | 1..469 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5126-RA | 1..1368 | 79..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5126-RA | 1..1368 | 79..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5126-RA | 1..1368 | 79..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5126-RA | 1..1368 | 79..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5126-RA | 1..1368 | 79..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5126-RA | 25..1668 | 1..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5126-RA | 25..1668 | 1..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5126-RA | 24..1667 | 1..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5126-RA | 25..1668 | 1..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5126-RA | 24..1667 | 1..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1182297..1183471 | 470..1644 | 100 | <- | Minus |
2L | 1183529..1183997 | 1..469 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1182297..1183471 | 470..1644 | 100 | <- | Minus |
2L | 1183529..1183997 | 1..469 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1182297..1183471 | 470..1644 | 100 | <- | Minus |
2L | 1183529..1183997 | 1..469 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 1182297..1183471 | 470..1644 | 100 | <- | Minus |
arm_2L | 1183529..1183997 | 1..469 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1182297..1183471 | 470..1644 | 100 | <- | Minus |
2L | 1183529..1183997 | 1..469 | 100 | Minus |
Translation from 0 to 1445
> LD42035.hyp KYTPTCVYCQLRLPIQIAIDSCVEVTMSTQQQQLDYIERHLVYDIFKNFG PSASLESHSVECSNGLDGFMSALYTVTLDVVIAERKRTEVVLVKFMKGTE EFRESSNSYIQFSNEIFAYAEILPAYENVLRTSHLESEVVKNWVPCCYFA RFGHVEGLGNGRESVLALKHLKGDGYQLGPRLTLRRDQLEAMVGLVGPFH ALGYATKILQPNVHARLRAGVVDMPFVSSSGKGIFDVLYRVAFDRFYEFY DRQKEQLLQGADPGFGAAIERLREKYFKQPTLLLERIRTSSFAEDQPDSH FATFLHGDYNRNNVLFHYGAEDKVDAIKAIDFQELRFSTTAIDLSFFMYM NTPSEGRKEIYADLLRKYHRSMIEMLELVLRRNRNELTDDRVDQLLQEYS FERFNAHFKRYAFYGPMVCMHFLPWLLGTEKDCAELSRLFETDMHGPAFH QLSLDIAGDEANQEIFKTVRHAYEHGYMDEI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5126-PA | 455 | CG5126-PA | 1..455 | 27..481 | 2384 | 100 | Plus |
CG11893-PA | 416 | CG11893-PA | 20..416 | 36..481 | 211 | 20.8 | Plus |
CG31300-PA | 422 | CG31300-PA | 20..339 | 36..379 | 203 | 21.9 | Plus |
CG2004-PG | 425 | CG2004-PG | 44..424 | 67..478 | 179 | 24.1 | Plus |
CG2004-PF | 425 | CG2004-PF | 44..424 | 67..478 | 179 | 24.1 | Plus |
Translation from 78 to 1445
> LD42035.pep MSTQQQQLDYIERHLVYDIFKNFGPSASLESHSVECSNGLDGFMSALYTV TLDVVIAERKRTEVVLVKFMKGTEEFRESSNSYIQFSNEIFAYAEILPAY ENVLRTSHLESEVVKNWVPCCYFARFGHVEGLGNGRESVLALKHLKGDGY QLGPRLTLRRDQLEAMVGLVGPFHALGYATKILQPNVHARLRAGVVDMPF VSSSGKGIFDVLYRVAFDRFYEFYDRQKEQLLQGADPGFGAAIERLREKY FKQPTLLLERIRTSSFAEDQPDSHFATFLHGDYNRNNVLFHYGAEDKVDA IKAIDFQELRFSTTAIDLSFFMYMNTPSEGRKEIYADLLRKYHRSMIEML ELVLRRNRNELTDDRVDQLLQEYSFERFNAHFKRYAFYGPMVCMHFLPWL LGTEKDCAELSRLFETDMHGPAFHQLSLDIAGDEANQEIFKTVRHAYEHG YMDEI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20839-PA | 317 | GF20839-PA | 1..158 | 1..158 | 654 | 76.6 | Plus |
Dana\GF20839-PA | 317 | GF20839-PA | 259..317 | 397..455 | 288 | 86.4 | Plus |
Dana\GF18512-PA | 449 | GF18512-PA | 39..357 | 18..353 | 227 | 25.2 | Plus |
Dana\GF17566-PA | 422 | GF17566-PA | 54..390 | 41..417 | 188 | 20.4 | Plus |
Dana\GF10136-PA | 471 | GF10136-PA | 54..403 | 34..398 | 186 | 23.5 | Plus |
Dana\GF19128-PA | 426 | GF19128-PA | 31..425 | 13..452 | 184 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24605-PA | 455 | GG24605-PA | 1..455 | 1..455 | 2321 | 94.9 | Plus |
Dere\GG17657-PA | 457 | GG17657-PA | 1..457 | 1..455 | 1936 | 77.5 | Plus |
Dere\GG22726-PA | 438 | GG22726-PA | 33..414 | 18..424 | 218 | 23.5 | Plus |
Dere\GG11392-PA | 422 | GG11392-PA | 54..336 | 41..350 | 194 | 22.5 | Plus |
Dere\GG20590-PA | 439 | GG20590-PA | 98..354 | 86..373 | 169 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12143-PA | 459 | GH12143-PA | 1..459 | 1..455 | 1468 | 60.3 | Plus |
Dgri\GH12146-PA | 137 | GH12146-PA | 1..88 | 44..131 | 260 | 54.5 | Plus |
Dgri\GH15763-PA | 443 | GH15763-PA | 33..401 | 18..410 | 188 | 22.5 | Plus |
Dgri\GH12146-PA | 137 | GH12146-PA | 89..137 | 375..455 | 174 | 42 | Plus |
Dgri\GH14961-PA | 452 | GH14961-PA | 54..451 | 34..453 | 163 | 21.9 | Plus |
Dgri\GH18230-PA | 420 | GH18230-PA | 54..339 | 41..353 | 156 | 20.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5126-PA | 455 | CG5126-PA | 1..455 | 1..455 | 2384 | 100 | Plus |
CG11893-PA | 416 | CG11893-PA | 20..416 | 10..455 | 211 | 20.8 | Plus |
CG14314-PA | 438 | CG14314-PA | 33..346 | 18..353 | 210 | 23.8 | Plus |
CG31300-PA | 422 | CG31300-PA | 20..339 | 10..353 | 203 | 21.9 | Plus |
CG2004-PG | 425 | CG2004-PG | 44..424 | 41..452 | 179 | 24.1 | Plus |
CG2004-PF | 425 | CG2004-PF | 44..424 | 41..452 | 179 | 24.1 | Plus |
CG2004-PD | 425 | CG2004-PD | 44..424 | 41..452 | 179 | 24.1 | Plus |
CG2004-PC | 425 | CG2004-PC | 44..424 | 41..452 | 179 | 24.1 | Plus |
CG2004-PA | 425 | CG2004-PA | 44..424 | 41..452 | 179 | 24.1 | Plus |
CG13658-PB | 422 | CG13658-PB | 54..339 | 41..353 | 172 | 21.8 | Plus |
CG5644-PA | 459 | CG5644-PA | 56..452 | 34..452 | 171 | 23 | Plus |
CG31104-PA | 420 | CG31104-PA | 18..420 | 10..455 | 156 | 18.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16200-PA | 456 | GI16200-PA | 1..456 | 1..455 | 1592 | 63.2 | Plus |
Dmoj\GI23724-PA | 447 | GI23724-PA | 37..405 | 18..410 | 199 | 23.6 | Plus |
Dmoj\GI15575-PA | 420 | GI15575-PA | 43..419 | 41..452 | 173 | 24.6 | Plus |
Dmoj\GI19247-PA | 457 | GI19247-PA | 99..421 | 86..448 | 163 | 23.3 | Plus |
Dmoj\GI19246-PA | 457 | GI19246-PA | 99..421 | 86..448 | 160 | 22.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26879-PA | 456 | GL26879-PA | 1..456 | 1..455 | 1836 | 76.1 | Plus |
Dper\GL12598-PA | 448 | GL12598-PA | 37..355 | 18..353 | 213 | 23.5 | Plus |
Dper\GL15044-PA | 456 | GL15044-PA | 59..449 | 34..452 | 171 | 24.7 | Plus |
Dper\GL13040-PA | 424 | GL13040-PA | 44..389 | 41..416 | 159 | 24.1 | Plus |
Dper\GL10725-PA | 434 | GL10725-PA | 87..314 | 74..331 | 158 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22648-PA | 456 | GA22648-PA | 1..456 | 1..455 | 1847 | 77.4 | Plus |
Dpse\GA12901-PA | 448 | GA12901-PA | 37..355 | 18..353 | 212 | 23.5 | Plus |
Dpse\GA16250-PA | 422 | GA16250-PA | 45..390 | 32..417 | 174 | 21.3 | Plus |
Dpse\GA19027-PA | 456 | GA19027-PA | 59..449 | 34..452 | 171 | 24.7 | Plus |
Dpse\GA15179-PA | 424 | GA15179-PA | 44..423 | 41..452 | 160 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16618-PA | 386 | GM16618-PA | 1..386 | 70..455 | 2036 | 98.2 | Plus |
Dsec\GM17835-PA | 422 | GM17835-PA | 54..339 | 41..353 | 211 | 23.7 | Plus |
Dsec\GM15287-PA | 439 | GM15287-PA | 34..397 | 18..410 | 209 | 22.8 | Plus |
Dsec\GM21117-PA | 425 | GM21117-PA | 30..424 | 13..452 | 181 | 24.2 | Plus |
Dsec\GM24900-PA | 459 | GM24900-PA | 56..452 | 34..452 | 164 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22920-PA | 455 | GD22920-PA | 1..455 | 1..455 | 2400 | 98.2 | Plus |
Dsim\GD21204-PA | 422 | GD21204-PA | 54..339 | 41..353 | 211 | 24.3 | Plus |
Dsim\GD19214-PA | 368 | GD19214-PA | 34..347 | 18..353 | 209 | 23.5 | Plus |
Dsim\GD21209-PA | 416 | GD21209-PA | 20..416 | 10..455 | 190 | 20.2 | Plus |
Dsim\GD16097-PA | 425 | GD16097-PA | 30..424 | 13..452 | 184 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15891-PA | 456 | GJ15891-PA | 1..456 | 1..455 | 1593 | 64.3 | Plus |
Dvir\GJ23282-PA | 448 | GJ23282-PA | 38..416 | 18..420 | 183 | 21.9 | Plus |
Dvir\GJ15182-PA | 420 | GJ15182-PA | 20..419 | 18..452 | 169 | 23.4 | Plus |
Dvir\GJ13682-PA | 443 | GJ13682-PA | 46..441 | 34..452 | 161 | 22.6 | Plus |
Dvir\GJ23473-PA | 422 | GJ23473-PA | 42..336 | 29..351 | 151 | 21.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25451-PA | 455 | GK25451-PA | 1..455 | 1..455 | 1505 | 61.4 | Plus |
Dwil\GK11249-PA | 440 | GK11249-PA | 38..349 | 23..353 | 195 | 24 | Plus |
Dwil\GK20724-PA | 436 | GK20724-PA | 40..419 | 29..448 | 169 | 22.8 | Plus |
Dwil\GK12285-PA | 492 | GK12285-PA | 152..488 | 86..455 | 168 | 23.3 | Plus |
Dwil\GK10325-PA | 424 | GK10325-PA | 24..423 | 18..452 | 159 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15699-PA | 455 | GE15699-PA | 1..455 | 1..455 | 2310 | 93.4 | Plus |
Dyak\GE16447-PA | 455 | GE16447-PA | 1..455 | 1..455 | 1953 | 77.6 | Plus |
Dyak\GE25520-PA | 438 | GE25520-PA | 33..346 | 18..353 | 209 | 23.5 | Plus |
Dyak\GE17434-PA | 425 | GE17434-PA | 30..424 | 13..452 | 190 | 24.2 | Plus |
Dyak\GE23592-PA | 416 | GE23592-PA | 20..333 | 10..353 | 181 | 22.1 | Plus |