BDGP Sequence Production Resources |
Search the DGRC for LD42037
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 420 |
Well: | 37 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8420-RA |
Protein status: | LD42037.pep: gold |
Preliminary Size: | 1984 |
Sequenced Size: | 1961 |
Gene | Date | Evidence |
---|---|---|
CG8420 | 2001-01-01 | Release 2 assignment |
CG8420 | 2001-07-04 | Blastp of sequenced clone |
CG8420 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8420 | 2008-04-29 | Release 5.5 accounting |
CG8420 | 2008-08-15 | Release 5.9 accounting |
CG8420 | 2008-12-18 | 5.12 accounting |
1961 bp (1961 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051945
> LD42037.complete AGTTTTCGGCTGTGCTGGCTGCTCTACGCTGCGATCTCCGTTCTCCGTTC TCCAATCTTTGTAATATCTGTTTAGATATACATAGTTATAGTATATACAT ACATATATTTCGTGTGCTCAGTGGAGCGTCTTCCGCGTTTTGTGGCTGCG TCGCTTAATTGGCCCAAAAGTATCTCAAGTGTGTGATTGTGAAAGTTCCT GAAGCAAAATGTACGTGAGACGAGCTCTGCTCTTGGCCTGCCTGCTGTGC CTCCAGCCGCTGGGTCCATCTATGGCCAGCGAGGATGAGTCCAATCCGCT GCTGGACATGGCCTCCATGTTCTTCCAGGAGGCGCTGTCCAACCAGAACG GTGGCAACAATGGAGGAGGCGGTGCTGGTTTGGCGGGTGTGGCCTCGCTA ATTGGCACCTTCATGCAAGCGAGTGGCAAATCTGGAGGCGCCGGAGCAGG AGGCGGCGGTGCTGGTGGCGCCATGCAGATCCTCTCGGGCCTGGGCAGTC TTCTGTCCAAGAGTCAGGGCGGTCAGAGCGGTGGCTTCGATCCCTCCATC ATTGGCAATGTCCTCGAGATGTTCACCCAGGGCGATGACGAGGAAGCCAC TCCACAGCAAAAGCGCAGCAATGGCGGTGGCTCTGAATCTGGCATTGGTC TGGATACCATACTGCAAGTGGCATCCGCCTTCATGAACACCCAGGGCAAC GATAAGGCCACACATCATCACCAGCAGAAGCGATCCACCGCCACGGAACC GGAATCCGAGAACGGACTGATGAACCTTCTGCCACTGGTCATGCAGGCGG TTAGCTCCTTTGCCGGTCCCGAGGGTCAGAGCACCCAGGAGAAGCACAAG AGCCACGCCTGGGTGCTGCCCCCATTCCTGGAGCACATTCACGTGCTGTG GGATCACTTCTCCAACTCCGAGCTGGCTGATGCGTTGTACGAGAAGTCCG GAGTTAACAAAATCATGAAGGGCTTCAAGGGTTCCGATGGCAAGCTGGAC TATGATAAGCTCTTCGAGTCGCTGAATAACCAATCCTTCCGTCGCCGCTG GATCAAGTCGGCCACACTCTACCTGGCCGACTGGGCCAGCTACCTGGCCA ATCCCGAGGTGTATCTCAGGTACTTCCAGACGGCACAGATCATGTTTAAC GGCTTGCTGAAGTCTCAAGGTTACCCCAAGCAGACCCACTTCGATCCCTC CCGTCCGGGCGAGACCATCTCGAATCTCTTGGACCATGTGGCCAAGCATC ATCTGAACGTTAAGATCGATTCGAGGCAGTACGTCAAGCCAGCCGTGGGC TATGCCAAGGAACTGCTAAAACTTGGCCAGGCACGCGGATTACTTCAGTT CAATGCCACCGAGATCAGCGACAAGCTAACGGATACGCTTAACCTGGAGG TTATTGAACCGGTGCTGAAAGTCCATCGCGCCTACAGATACATCTCCAAG TCGCCGCAATGCGATCGCTACGTGCTCTGTCAGCTGAATGCAGCGGCTCT CGATCAGCAGGAGAAGCAGAGGCAGCACGACCAATACCAGCAGCACCACC AGCCCAAGCAGAGCCAACTGAATCGCCCGACATCGGCGTCCAGTCTAATT GCCGGAGTTAGTCCGAAAATCGTTAAGATCGGGAGCATGGGTGCGGCAAT CTTCATTAGCACGGAAACCGGTACGCCGTTCTGGACCCTCTTCGGTGTGA TCAATGCGCCATACAATTGCGAGGCCAAATATCCAGTCGACTGCAATGGT TTCCACGAGGGCGAGGCCAAGGTGACCACGGAATATATCCACAACGAGTT GTAGTATTCCAGTTGCAAATGGACAAGCGAGATCCGGACAAGAAAAGTAG AAGACGAAGGCTCATTAAGACGATTTAGCTGTAATTGAGATAAAGATTTC GTGTGTATATAGTATTACGGATTGAAATATATATTTAAATTTAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5073260..5074230 | 1..971 | 4855 | 100 | Plus |
chr3R | 27901430 | chr3R | 5076458..5076784 | 1398..1724 | 1620 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 5075709..5075993 | 1117..1401 | 1410 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 5077015..5077235 | 1722..1942 | 1030 | 97.7 | Plus |
chr3R | 27901430 | chr3R | 5074615..5074767 | 969..1121 | 765 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 9247466..9248436 | 1..971 | 4855 | 100 | Plus |
3R | 32079331 | 3R | 9250654..9250980 | 1398..1724 | 1635 | 100 | Plus |
3R | 32079331 | 3R | 9249917..9250201 | 1117..1401 | 1425 | 100 | Plus |
3R | 32079331 | 3R | 9251211..9251434 | 1722..1945 | 1120 | 100 | Plus |
3R | 32079331 | 3R | 9248823..9248975 | 969..1121 | 765 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 8988297..8989267 | 1..971 | 4855 | 100 | Plus |
3R | 31820162 | 3R | 8991485..8991811 | 1398..1724 | 1635 | 100 | Plus |
3R | 31820162 | 3R | 8990748..8991032 | 1117..1401 | 1425 | 100 | Plus |
3R | 31820162 | 3R | 8992042..8992265 | 1722..1945 | 1120 | 100 | Plus |
3R | 31820162 | 3R | 8989654..8989806 | 969..1121 | 765 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5073260..5074229 | 1..970 | 100 | -> | Plus |
chr3R | 5074617..5074765 | 971..1119 | 100 | -> | Plus |
chr3R | 5075712..5075991 | 1120..1399 | 99 | -> | Plus |
chr3R | 5076460..5076783 | 1400..1723 | 99 | -> | Plus |
chr3R | 5077017..5077213 | 1724..1920 | 97 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8420-RA | 1..1596 | 209..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8420-RA | 1..1596 | 209..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8420-RA | 1..1596 | 209..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8420-RA | 1..1596 | 209..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8420-RA | 1..1596 | 209..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8420-RA | 16..1957 | 1..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8420-RA | 16..1957 | 1..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8420-RA | 18..1959 | 1..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8420-RA | 16..1957 | 1..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8420-RA | 18..1959 | 1..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9247466..9248435 | 1..970 | 100 | -> | Plus |
3R | 9248825..9248973 | 971..1119 | 100 | -> | Plus |
3R | 9249920..9250199 | 1120..1399 | 100 | -> | Plus |
3R | 9250656..9250979 | 1400..1723 | 100 | -> | Plus |
3R | 9251213..9251431 | 1724..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9247466..9248435 | 1..970 | 100 | -> | Plus |
3R | 9248825..9248973 | 971..1119 | 100 | -> | Plus |
3R | 9249920..9250199 | 1120..1399 | 100 | -> | Plus |
3R | 9250656..9250979 | 1400..1723 | 100 | -> | Plus |
3R | 9251213..9251431 | 1724..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9247466..9248435 | 1..970 | 100 | -> | Plus |
3R | 9248825..9248973 | 971..1119 | 100 | -> | Plus |
3R | 9249920..9250199 | 1120..1399 | 100 | -> | Plus |
3R | 9250656..9250979 | 1400..1723 | 100 | -> | Plus |
3R | 9251213..9251431 | 1724..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5073188..5074157 | 1..970 | 100 | -> | Plus |
arm_3R | 5074547..5074695 | 971..1119 | 100 | -> | Plus |
arm_3R | 5075642..5075921 | 1120..1399 | 100 | -> | Plus |
arm_3R | 5076378..5076701 | 1400..1723 | 100 | -> | Plus |
arm_3R | 5076935..5077153 | 1724..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8988297..8989266 | 1..970 | 100 | -> | Plus |
3R | 8989656..8989804 | 971..1119 | 100 | -> | Plus |
3R | 8990751..8991030 | 1120..1399 | 100 | -> | Plus |
3R | 8991487..8991810 | 1400..1723 | 100 | -> | Plus |
3R | 8992044..8992262 | 1724..1942 | 100 | Plus |
Translation from 208 to 1803
> LD42037.pep MYVRRALLLACLLCLQPLGPSMASEDESNPLLDMASMFFQEALSNQNGGN NGGGGAGLAGVASLIGTFMQASGKSGGAGAGGGGAGGAMQILSGLGSLLS KSQGGQSGGFDPSIIGNVLEMFTQGDDEEATPQQKRSNGGGSESGIGLDT ILQVASAFMNTQGNDKATHHHQQKRSTATEPESENGLMNLLPLVMQAVSS FAGPEGQSTQEKHKSHAWVLPPFLEHIHVLWDHFSNSELADALYEKSGVN KIMKGFKGSDGKLDYDKLFESLNNQSFRRRWIKSATLYLADWASYLANPE VYLRYFQTAQIMFNGLLKSQGYPKQTHFDPSRPGETISNLLDHVAKHHLN VKIDSRQYVKPAVGYAKELLKLGQARGLLQFNATEISDKLTDTLNLEVIE PVLKVHRAYRYISKSPQCDRYVLCQLNAAALDQQEKQRQHDQYQQHHQPK QSQLNRPTSASSLIAGVSPKIVKIGSMGAAIFISTETGTPFWTLFGVINA PYNCEAKYPVDCNGFHEGEAKVTTEYIHNEL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16583-PA | 526 | GF16583-PA | 1..526 | 1..531 | 2199 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15312-PA | 535 | GG15312-PA | 2..535 | 1..531 | 2727 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19923-PA | 539 | GH19923-PA | 1..539 | 1..531 | 2126 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8420-PA | 531 | CG8420-PA | 1..531 | 1..531 | 2775 | 100 | Plus |
CG8420-PB | 220 | CG8420-PB | 1..220 | 312..531 | 1160 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22041-PA | 538 | GI22041-PA | 1..538 | 1..531 | 1973 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13940-PA | 514 | GL13940-PA | 8..514 | 33..531 | 2135 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21065-PA | 538 | GA21065-PA | 1..538 | 1..531 | 2253 | 85.8 | Plus |
Dpse\GA21065-PB | 219 | GA21065-PB | 1..219 | 312..531 | 998 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23786-PA | 267 | GM23786-PA | 38..267 | 305..531 | 1227 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18597-PA | 534 | GD18597-PA | 1..534 | 1..531 | 2805 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24093-PA | 533 | GJ24093-PA | 1..533 | 1..531 | 2103 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22429-PA | 539 | GK22429-PA | 1..539 | 1..531 | 2134 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25931-PA | 531 | GE25931-PA | 2..531 | 1..531 | 2763 | 97 | Plus |
Translation from 208 to 1803
> LD42037.hyp MYVRRALLLACLLCLQPLGPSMASEDESNPLLDMASMFFQEALSNQNGGN NGGGGAGLAGVASLIGTFMQASGKSGGAGAGGGGAGGAMQILSGLGSLLS KSQGGQSGGFDPSIIGNVLEMFTQGDDEEATPQQKRSNGGGSESGIGLDT ILQVASAFMNTQGNDKATHHHQQKRSTATEPESENGLMNLLPLVMQAVSS FAGPEGQSTQEKHKSHAWVLPPFLEHIHVLWDHFSNSELADALYEKSGVN KIMKGFKGSDGKLDYDKLFESLNNQSFRRRWIKSATLYLADWASYLANPE VYLRYFQTAQIMFNGLLKSQGYPKQTHFDPSRPGETISNLLDHVAKHHLN VKIDSRQYVKPAVGYAKELLKLGQARGLLQFNATEISDKLTDTLNLEVIE PVLKVHRAYRYISKSPQCDRYVLCQLNAAALDQQEKQRQHDQYQQHHQPK QSQLNRPTSASSLIAGVSPKIVKIGSMGAAIFISTETGTPFWTLFGVINA PYNCEAKYPVDCNGFHEGEAKVTTEYIHNEL*