BDGP Sequence Production Resources |
Search the DGRC for LD42063
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 420 |
Well: | 63 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1636-RA |
Protein status: | LD42063.pep: gold |
Preliminary Size: | 1406 |
Sequenced Size: | 1323 |
Gene | Date | Evidence |
---|---|---|
CG1636 | 2001-01-01 | Release 2 assignment |
CG1636 | 2001-07-04 | Blastp of sequenced clone |
CG1636 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1636 | 2008-04-29 | Release 5.5 accounting |
CG1636 | 2008-08-15 | Release 5.9 accounting |
CG1636 | 2008-12-18 | 5.12 accounting |
1323 bp (1323 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051948
> LD42063.complete TAGAAACGAAACAAATTCTCCCAATTTTCGGCTGAAAACGAGGAACACCA ACTCGCGATTCTGGGGCGGCAGAACGGGAAATCCCGCCGAGGAGCAGCAT GACCTCCATTCTGGACATGAAGGCCGGTCCGCCCGACTACTGGGCGGAGA TCAGCAACTTCTTTCTGCCGCTGAAATACCTGATCACCAACGACCGCTTC GATTCGATGGTGCGGGACATAGACCTCTATTACCTGATCAACGGGGTCTT TTGGATATTCGTGGCGTTGTCTTGCGGCTACTACGCCTTCCAGCGGCTCT TCCAGTTCTTTCTGAAGTCGTCGAGCATGAAGCACTTTCAGCGGAGGCTG TTCGCCCGCGTCATTTGGAACATCGCCTTCTATGCGGCCAGCTGCCTGTT CCTGCACTTCTACAACGAGTTCATGATCCTGCCGCAGCTGATGAAGAACC AAGGACGCTACTCGCTCTTCTACTCCTCGGAGAACCTGATCTTCTATCGA TCTCATCAGGCGGAAAAGTTTCAGTTCTACTCGATCTTCATTATCACGTT CTACCTGCATGGGGCGTGGTTGGACTTCAAGGACGCTGACTTCCTGGAGG TGGGCTCCAAGGGACTCTACCTGCTGTCCCTCGTCGCCATCGATGTTTAC AGGTACGAAAACTACTTTGTGGGCCTGAATCTAACGGTGGGTCTGTACAG CATACTCACCGAGGTGCTAGCCCTGTTGGTCCTGCCCAGCACCAATTCAC ACCGGATCATCTACCAGGTTTTCCTCGGTCTGCGCATCATGGTGTGGGCG TATGTGTTTGTCAACCTACTGCCCTTTAAGTACTTCATACCCACGCTGTT CGCCAAGAACTTTAAGCTTTCCCTGAATGTGCCCATTTGGTTGTGGTACG GCCTCTCCATTTGGAACTCGCCGGTGCTGCAATACTTCTACCATCAGATA TATCACACAGCGCCGTCGGATTGTTCGGGCGAGGGATCGGCGGCTAAGTG CATCCTGGTCAAGGACACCAGTGAGTTCCGGCACTACAAGACACTGAAGA AGGCCTATTTGGAGGTAAAGCTGGCACACATTAGAACCACGTCCAATTCG CTGCCCTCCGAAACCAGTTCGGCCTCGGCCAAAACCTTTCAGGCCATAAA ATGCGTCATGATGCTTAAGCGCAAATTGAAGCGAATTCGCGAGGGACGTG GCCATGAGCCGGAGGATGACAACGATGACCAGGCCATTGATACCTAATCG CGTCCTACCGCACGGACGCAGCACACTTTTACACAGTAGAAAACCACATT TCCTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 8166514..8167016 | 651..1153 | 2455 | 99.2 | Plus |
chrX | 22417052 | chrX | 8166084..8166434 | 303..653 | 1740 | 99.7 | Plus |
chrX | 22417052 | chrX | 8165257..8165561 | 1..305 | 1525 | 100 | Plus |
chrX | 22417052 | chrX | 8167075..8167227 | 1153..1305 | 765 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 8274707..8275209 | 651..1153 | 2515 | 100 | Plus |
X | 23542271 | X | 8274277..8274627 | 303..653 | 1755 | 100 | Plus |
X | 23542271 | X | 8273450..8273754 | 1..305 | 1525 | 100 | Plus |
X | 23542271 | X | 8275268..8275436 | 1153..1321 | 785 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 8282805..8283307 | 651..1153 | 2515 | 100 | Plus |
X | 23527363 | X | 8282375..8282725 | 303..653 | 1755 | 100 | Plus |
X | 23527363 | X | 8281548..8281852 | 1..305 | 1525 | 100 | Plus |
X | 23527363 | X | 8283366..8283534 | 1153..1321 | 785 | 97.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8165257..8165561 | 1..305 | 100 | -> | Plus |
chrX | 8166087..8166433 | 306..652 | 99 | -> | Plus |
chrX | 8166516..8167015 | 653..1152 | 99 | -> | Plus |
chrX | 8167075..8167227 | 1153..1305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1636-RA | 1..1149 | 99..1247 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1636-RA | 1..1149 | 99..1247 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1636-RA | 1..1149 | 99..1247 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1636-RA | 1..1149 | 99..1247 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1636-RA | 1..1149 | 99..1247 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1636-RA | 34..1338 | 1..1305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1636-RA | 34..1338 | 1..1305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1636-RA | 39..1343 | 1..1305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1636-RA | 34..1338 | 1..1305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1636-RA | 39..1343 | 1..1305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8273450..8273754 | 1..305 | 100 | -> | Plus |
X | 8274280..8274626 | 306..652 | 100 | -> | Plus |
X | 8274709..8275208 | 653..1152 | 100 | -> | Plus |
X | 8275268..8275420 | 1153..1305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8273450..8273754 | 1..305 | 100 | -> | Plus |
X | 8274280..8274626 | 306..652 | 100 | -> | Plus |
X | 8274709..8275208 | 653..1152 | 100 | -> | Plus |
X | 8275268..8275420 | 1153..1305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8273450..8273754 | 1..305 | 100 | -> | Plus |
X | 8274280..8274626 | 306..652 | 100 | -> | Plus |
X | 8274709..8275208 | 653..1152 | 100 | -> | Plus |
X | 8275268..8275420 | 1153..1305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8168313..8168659 | 306..652 | 100 | -> | Plus |
arm_X | 8167483..8167787 | 1..305 | 100 | -> | Plus |
arm_X | 8168742..8169241 | 653..1152 | 100 | -> | Plus |
arm_X | 8169301..8169453 | 1153..1305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8281548..8281852 | 1..305 | 100 | -> | Plus |
X | 8282378..8282724 | 306..652 | 100 | -> | Plus |
X | 8282807..8283306 | 653..1152 | 100 | -> | Plus |
X | 8283366..8283518 | 1153..1305 | 100 | Plus |
Translation from 98 to 1246
> LD42063.pep MTSILDMKAGPPDYWAEISNFFLPLKYLITNDRFDSMVRDIDLYYLINGV FWIFVALSCGYYAFQRLFQFFLKSSSMKHFQRRLFARVIWNIAFYAASCL FLHFYNEFMILPQLMKNQGRYSLFYSSENLIFYRSHQAEKFQFYSIFIIT FYLHGAWLDFKDADFLEVGSKGLYLLSLVAIDVYRYENYFVGLNLTVGLY SILTEVLALLVLPSTNSHRIIYQVFLGLRIMVWAYVFVNLLPFKYFIPTL FAKNFKLSLNVPIWLWYGLSIWNSPVLQYFYHQIYHTAPSDCSGEGSAAK CILVKDTSEFRHYKTLKKAYLEVKLAHIRTTSNSLPSETSSASAKTFQAI KCVMMLKRKLKRIREGRGHEPEDDNDDQAIDT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22490-PA | 383 | GF22490-PA | 1..383 | 1..382 | 1814 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19310-PA | 382 | GG19310-PA | 1..382 | 1..382 | 2027 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12362-PA | 380 | GH12362-PA | 2..380 | 3..382 | 1684 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1636-PC | 382 | CG1636-PC | 1..382 | 1..382 | 2017 | 100 | Plus |
CG1636-PA | 382 | CG1636-PA | 1..382 | 1..382 | 2017 | 100 | Plus |
CG1636-PB | 366 | CG1636-PB | 1..366 | 1..382 | 1904 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14734-PA | 379 | GI14734-PA | 2..375 | 3..377 | 1665 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19814-PA | 383 | GL19814-PA | 1..383 | 1..382 | 1772 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27232-PA | 323 | GA27232-PA | 1..323 | 1..323 | 1528 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21496-PA | 382 | GM21496-PA | 1..382 | 1..382 | 2038 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16892-PA | 382 | GD16892-PA | 1..382 | 1..382 | 2038 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19146-PA | 379 | GJ19146-PA | 2..379 | 3..381 | 1613 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16290-PA | 381 | GK16290-PA | 1..377 | 1..377 | 1716 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15775-PA | 382 | GE15775-PA | 1..382 | 1..382 | 2024 | 99 | Plus |
Translation from 98 to 1246
> LD42063.hyp MTSILDMKAGPPDYWAEISNFFLPLKYLITNDRFDSMVRDIDLYYLINGV FWIFVALSCGYYAFQRLFQFFLKSSSMKHFQRRLFARVIWNIAFYAASCL FLHFYNEFMILPQLMKNQGRYSLFYSSENLIFYRSHQAEKFQFYSIFIIT FYLHGAWLDFKDADFLEVGSKGLYLLSLVAIDVYRYENYFVGLNLTVGLY SILTEVLALLVLPSTNSHRIIYQVFLGLRIMVWAYVFVNLLPFKYFIPTL FAKNFKLSLNVPIWLWYGLSIWNSPVLQYFYHQIYHTAPSDCSGEGSAAK CILVKDTSEFRHYKTLKKAYLEVKLAHIRTTSNSLPSETSSASAKTFQAI KCVMMLKRKLKRIREGRGHEPEDDNDDQAIDT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1636-PC | 382 | CG1636-PC | 1..382 | 1..382 | 2017 | 100 | Plus |
CG1636-PA | 382 | CG1636-PA | 1..382 | 1..382 | 2017 | 100 | Plus |
CG1636-PB | 366 | CG1636-PB | 1..366 | 1..382 | 1904 | 95.8 | Plus |