BDGP Sequence Production Resources |
Search the DGRC for LD42227
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 422 |
Well: | 27 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11596-RA |
Protein status: | LD42227.pep: gold |
Preliminary Size: | 1900 |
Sequenced Size: | 1750 |
Gene | Date | Evidence |
---|---|---|
CG11596 | 2001-01-01 | Release 2 assignment |
CG11596 | 2001-07-04 | Blastp of sequenced clone |
CG11596 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11596 | 2008-04-29 | Release 5.5 accounting |
CG11596 | 2008-08-15 | Release 5.9 accounting |
CG11596 | 2008-12-18 | 5.12 accounting |
1750 bp (1750 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051951
> LD42227.complete AGACGACAGCAGAATGCAAAGGCAACGGATTACTCCCAGGATTTAAATAG CATAGATTATCGTTGAAACCGCTGACGACGCGCCCAGATGAGCTCCATGG ACTGCGCCACGTTCCCAATGCATCCTAAAATGGACGAGCAACTGGCCCGA ACCTTCGTCATCAACGAGGAGGAGGAGGAGAAGCACATTCAGAAGGTGCA GAACGCCTTCCTTTACTATGGGCCATATGCGTGTCAGCGGCTAAAGCGCT CCATGGATTACCTGAACAGCCTGTCTGGCGAGGACCAAATCATGCTAGCC AAGTACCGAGGGCATCTGGAGTGCGTGCGCACGTGCATCGATCGCAACCA GGCGGTTATCCGGGAAATATTGCGCGGGCGTGTCCTCTATCCGACGGATG AGGCGACTGGTGATCCCTCGGAGTTTGACGAGCCGCCGCCAAATGTGCGG CACGGTGACATGGACCAGGCCCAGTCGACGTTGAAGTTGATTGCGCGCGA CTGGAGCACTGAAGGAGCCTTAGAACGGGAGCAATCGTATAAACCGATCA TCGACAGCATCGTTGCGTACTTCAAGCACAGCGATTTCGAGCTGAAGGAT ATAAAGATCCTAGTGCCGGGAGCGGGGTTGGGACGGCTCACCTACGAGCT TGCCTGCTTGGGGTACTCGTGCGAGGGCAACGAGTTTTCCTACTTCATGC TGATCGCCTCCAATTTTGTCCTCAACCTCTGCGACAACGAGAACAAGTAC GTGTTATATCCGTGGGTGCACCAGTATGTGAATAACTTAAGGCGTGAGGA TCAGGTGGCCCCCGTTCGTTTCCCAGACGTCTGCCCGCTTAAAAATCCAC CCAAGGGCCATTTTGAAATAGCAGCTGGCGACTTTCTGGAGGTCTACAAG ACGCCGAACGCCTACAACTGCGTGGCTACGTGCTTCTTCATCGATTGTGC CAATAATGTTATTGACTTCATACGCACAATTTACAAAATCCTCGTGCCTG GTGGCATTTGGGTGAATCTCGGGCCGCTGCTGTACCATTTTAGCGACGTC AGCGGGCAAAACAGCATCGAGCCGGCTTTCGAGGACCTTTGCATTATCAT GGAAAGCGTAGGATTCGTTATCGAGAAATCACGCACCGGCATCCGTACCA AGTACGCACAGAACCCGTCTTCAATGAAACAGAGCGAGTACCAGAGTCTT TTCTGGGTCTGCCGCAAGCCGGATCTATTTGAGGAGCAGCGGGGCAAACG CAAGGCCTCCAGGGAGCCACACGATCTTATTGTGCGCGAGGACAGCGAGG AGGAGGGGGAGCAACAGCCGGAACGAAATGAAACGGAAGAAAAACAGCAA CTGAAACCGCTGGCCACAGCCAACTGCGAGACTGAGATAAAGGAGCAGCC ATCGTGATAGCCATTGAACCAAACTCAACAACACATCCAAACACCACAAT CAAGTCCAAGTGCAAACCCACCTACAGATGGCATCACGAACATCTTAATT ACCACGTCACAGGCAAGACAGGGAATCGACACTGCAGTGCTTCGATGTTA TAGATTACACTTTATACCTATTATTTACTCCTACACACTGTTATATATGC CAGTTTTAATTTTTCAAAGGATGCAAATTTTAGGACAATTTCTCGCTCAT TATGCTCATCATGCTAACTTAAATGGGAAAAGCGTCCCAACTAGGTCAAC CAAATATATCAAAAGAAAATTTTTAAAAATTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11596-RA | 1868 | CG11596-RA | 37..1777 | 1..1741 | 8675 | 99.8 | Plus |
CG11596.a | 1756 | CG11596.a | 244..1756 | 221..1733 | 7565 | 100 | Plus |
CG11596-RC | 1932 | CG11596-RC | 567..1841 | 467..1741 | 6345 | 99.8 | Plus |
CG11596-RC | 1932 | CG11596-RC | 50..517 | 1..468 | 2340 | 100 | Plus |
CG11596.a | 1756 | CG11596.a | 50..245 | 1..196 | 980 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1823619..1824363 | 987..1731 | 3725 | 100 | Plus |
chrX | 22417052 | chrX | 1823300..1823557 | 729..986 | 1290 | 100 | Plus |
chrX | 22417052 | chrX | 1822179..1822427 | 221..469 | 1245 | 100 | Plus |
chrX | 22417052 | chrX | 1821545..1821766 | 1..222 | 1110 | 100 | Plus |
chrX | 22417052 | chrX | 1823090..1823230 | 588..728 | 705 | 100 | Plus |
chrX | 22417052 | chrX | 1822896..1823016 | 467..587 | 605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 1929773..1930527 | 987..1741 | 3745 | 99.7 | Plus |
X | 23542271 | X | 1929454..1929711 | 729..986 | 1290 | 100 | Plus |
X | 23542271 | X | 1928333..1928581 | 221..469 | 1245 | 100 | Plus |
X | 23542271 | X | 1927699..1927920 | 1..222 | 1110 | 100 | Plus |
X | 23542271 | X | 1929244..1929384 | 588..728 | 705 | 100 | Plus |
X | 23542271 | X | 1929050..1929170 | 467..587 | 605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 1937871..1938625 | 987..1741 | 3745 | 99.7 | Plus |
X | 23527363 | X | 1937552..1937809 | 729..986 | 1290 | 100 | Plus |
X | 23527363 | X | 1936431..1936679 | 221..469 | 1245 | 100 | Plus |
X | 23527363 | X | 1935797..1936018 | 1..222 | 1110 | 100 | Plus |
X | 23527363 | X | 1937342..1937482 | 588..728 | 705 | 100 | Plus |
X | 23527363 | X | 1937148..1937268 | 467..587 | 605 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1821545..1821765 | 1..221 | 100 | -> | Plus |
chrX | 1822180..1822426 | 222..468 | 100 | -> | Plus |
chrX | 1822898..1823016 | 469..587 | 100 | -> | Plus |
chrX | 1823090..1823230 | 588..728 | 100 | -> | Plus |
chrX | 1823300..1823557 | 729..986 | 100 | -> | Plus |
chrX | 1823619..1824363 | 987..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11596-RA | 1..1320 | 88..1407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11596-RA | 1..1320 | 88..1407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11596-RA | 1..1320 | 88..1407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11596-RA | 1..1320 | 88..1407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11596-RA | 1..1320 | 88..1407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11596-RA | 1..1731 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11596-RA | 1..1731 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11596-RA | 17..1747 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11596-RA | 1..1731 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11596-RA | 17..1747 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1927699..1927919 | 1..221 | 100 | -> | Plus |
X | 1928334..1928580 | 222..468 | 100 | -> | Plus |
X | 1929052..1929170 | 469..587 | 100 | -> | Plus |
X | 1929244..1929384 | 588..728 | 100 | -> | Plus |
X | 1929454..1929711 | 729..986 | 100 | -> | Plus |
X | 1929773..1930517 | 987..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1927699..1927919 | 1..221 | 100 | -> | Plus |
X | 1928334..1928580 | 222..468 | 100 | -> | Plus |
X | 1929052..1929170 | 469..587 | 100 | -> | Plus |
X | 1929244..1929384 | 588..728 | 100 | -> | Plus |
X | 1929454..1929711 | 729..986 | 100 | -> | Plus |
X | 1929773..1930517 | 987..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1927699..1927919 | 1..221 | 100 | -> | Plus |
X | 1928334..1928580 | 222..468 | 100 | -> | Plus |
X | 1929052..1929170 | 469..587 | 100 | -> | Plus |
X | 1929244..1929384 | 588..728 | 100 | -> | Plus |
X | 1929454..1929711 | 729..986 | 100 | -> | Plus |
X | 1929773..1930517 | 987..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1823277..1823417 | 588..728 | 100 | -> | Plus |
arm_X | 1821732..1821952 | 1..221 | 100 | -> | Plus |
arm_X | 1822367..1822613 | 222..468 | 100 | -> | Plus |
arm_X | 1823085..1823203 | 469..587 | 100 | -> | Plus |
arm_X | 1823487..1823744 | 729..986 | 100 | -> | Plus |
arm_X | 1823806..1824550 | 987..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1937552..1937809 | 729..986 | 100 | -> | Plus |
X | 1935797..1936017 | 1..221 | 100 | -> | Plus |
X | 1936432..1936678 | 222..468 | 100 | -> | Plus |
X | 1937150..1937268 | 469..587 | 100 | -> | Plus |
X | 1937342..1937482 | 588..728 | 100 | -> | Plus |
X | 1937871..1938615 | 987..1731 | 100 | Plus |
Translation from 87 to 1406
> LD42227.pep MSSMDCATFPMHPKMDEQLARTFVINEEEEEKHIQKVQNAFLYYGPYACQ RLKRSMDYLNSLSGEDQIMLAKYRGHLECVRTCIDRNQAVIREILRGRVL YPTDEATGDPSEFDEPPPNVRHGDMDQAQSTLKLIARDWSTEGALEREQS YKPIIDSIVAYFKHSDFELKDIKILVPGAGLGRLTYELACLGYSCEGNEF SYFMLIASNFVLNLCDNENKYVLYPWVHQYVNNLRREDQVAPVRFPDVCP LKNPPKGHFEIAAGDFLEVYKTPNAYNCVATCFFIDCANNVIDFIRTIYK ILVPGGIWVNLGPLLYHFSDVSGQNSIEPAFEDLCIIMESVGFVIEKSRT GIRTKYAQNPSSMKQSEYQSLFWVCRKPDLFEEQRGKRKASREPHDLIVR EDSEEEGEQQPERNETEEKQQLKPLATANCETEIKEQPS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22187-PA | 436 | GF22187-PA | 1..395 | 15..404 | 1898 | 89.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12893-PA | 460 | GG12893-PA | 1..460 | 1..439 | 2088 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17892-PA | 419 | GH17892-PA | 1..419 | 15..427 | 1522 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11596-PA | 439 | CG11596-PA | 1..439 | 1..439 | 2345 | 100 | Plus |
CG11596-PC | 456 | CG11596-PC | 1..456 | 1..439 | 2317 | 96.3 | Plus |
CG11596-PE | 401 | CG11596-PE | 1..401 | 56..439 | 2022 | 95.8 | Plus |
CG11596-PD | 401 | CG11596-PD | 1..401 | 56..439 | 2022 | 95.8 | Plus |
CG11596-PB | 401 | CG11596-PB | 1..401 | 56..439 | 2022 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21682-PA | 424 | GI21682-PA | 10..423 | 9..413 | 1577 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15251-PA | 453 | GL15251-PA | 1..412 | 1..404 | 1816 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11089-PA | 453 | GA11089-PA | 1..414 | 1..406 | 1818 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19182-PA | 455 | GM19182-PA | 1..455 | 4..439 | 2276 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16577-PA | 457 | GD16577-PA | 1..457 | 4..439 | 2268 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15861-PA | 430 | GJ15861-PA | 10..430 | 9..416 | 1557 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25180-PA | 443 | GK25180-PA | 1..431 | 1..427 | 1725 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16224-PA | 458 | GE16224-PA | 1..458 | 1..439 | 2061 | 89.3 | Plus |
Translation from 87 to 1406
> LD42227.hyp MSSMDCATFPMHPKMDEQLARTFVINEEEEEKHIQKVQNAFLYYGPYACQ RLKRSMDYLNSLSGEDQIMLAKYRGHLECVRTCIDRNQAVIREILRGRVL YPTDEATGDPSEFDEPPPNVRHGDMDQAQSTLKLIARDWSTEGALEREQS YKPIIDSIVAYFKHSDFELKDIKILVPGAGLGRLTYELACLGYSCEGNEF SYFMLIASNFVLNLCDNENKYVLYPWVHQYVNNLRREDQVAPVRFPDVCP LKNPPKGHFEIAAGDFLEVYKTPNAYNCVATCFFIDCANNVIDFIRTIYK ILVPGGIWVNLGPLLYHFSDVSGQNSIEPAFEDLCIIMESVGFVIEKSRT GIRTKYAQNPSSMKQSEYQSLFWVCRKPDLFEEQRGKRKASREPHDLIVR EDSEEEGEQQPERNETEEKQQLKPLATANCETEIKEQPS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11596-PA | 439 | CG11596-PA | 1..439 | 1..439 | 2345 | 100 | Plus |
CG11596-PC | 456 | CG11596-PC | 1..456 | 1..439 | 2317 | 96.3 | Plus |
CG11596-PE | 401 | CG11596-PE | 1..401 | 56..439 | 2022 | 95.8 | Plus |
CG11596-PD | 401 | CG11596-PD | 1..401 | 56..439 | 2022 | 95.8 | Plus |
CG11596-PB | 401 | CG11596-PB | 1..401 | 56..439 | 2022 | 95.8 | Plus |