BDGP Sequence Production Resources |
Search the DGRC for LD42289
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 422 |
Well: | 89 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4036-RA |
Protein status: | LD42289.pep: gold |
Preliminary Size: | 1118 |
Sequenced Size: | 987 |
Gene | Date | Evidence |
---|---|---|
CG4036 | 2001-01-01 | Release 2 assignment |
CG4036 | 2002-06-12 | Blastp of sequenced clone |
CG4036 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4036 | 2008-04-29 | Release 5.5 accounting |
CG4036 | 2008-08-15 | Release 5.9 accounting |
CG4036 | 2008-12-18 | 5.12 accounting |
987 bp (987 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122185
> LD42289.complete CTTTTGCCCAATTTCAGGATGAATACAATTCGTCCTTGCGGTTGTAAGGG CGTTCGCACCTGCTTGAGCTGCGAACAGGACTTTCATATAGCGAAGACCT CGCTACGGGAACAATTCCAGCAACTGGAAGCATGGTCCTACTGTATCCAG TGCGACCTTCTGCAGCGCGGTTGGGATACCAATCATGTCCAAAAGGATCA TGAAAATCACAAAAAAGATGAGGGCCTCCCACTGCCGGGCATCCTGGTGC AGGAGGAATTCCTTAGCGTTGATGAGGGCGCCCAACTTATAGCCGACTTG GATGACCTGCCATGGGACATCTCGCAGAGCGGCAGGCGAAAACAGAACTT CGGACCCAAGACCAACTTTAAAAAGCGCAAACTGCGGCTGGGATCCTTTG CCGGATTCCCCAGGACAACGGAATATGTGCAACGGCGCTTCGAAGACGTT CCCCTGCTTCGTGGCTTTCAGACCATCGAACAGTGCTCCCTGGAGTACGA GCCCAGCAAAGGAGCCAGCATAGATCCGCACGTGGACGATTGCTGGATCT GGGGCGAGCGTGTGGTCACTGTCAACTGCCTCGGCGACTCAGTGCTCACT TTGACGCCCTACGAAGTTCAACAATCGGGCAAGTACAACTTGGACTTGGT TGCCAGCTACGAAGATGAACTATTGGCGCCTCTACTGACAGATGACCAAC TTGCAACTTTTGAGGGAAAGGTGCTGCGCATACCTATGCCAAACCTCTCC TTGATAGTTTTGTATGGGCCAGCGAGGTACCAGTTTGAGCATTCTGTACT ACGCGAGGATGTCCAAGAGCGCCGCGTTTGTGTAGCCTACCGGGAGTTTA CGCCCATGTACATCAATGGCGTAGACATCCAAAAGGGAGATCCTGTCCGA GAAAAGTCTCAGATATTCTGGCAAATAAACTAGCAAACAAGACCAATAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 9789794..9790536 | 1..743 | 3685 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 9790597..9790800 | 744..947 | 1020 | 100 | Plus |
chr2L | 23010047 | chr2L | 9788207..9788374 | 743..576 | 705 | 94.6 | Minus |
chr2L | 23010047 | chr2L | 9788376..9788471 | 97..2 | 315 | 88.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9790952..9791694 | 1..743 | 3715 | 100 | Plus |
2L | 23513712 | 2L | 9791755..9791958 | 744..947 | 1020 | 100 | Plus |
2L | 23513712 | 2L | 9789367..9789534 | 743..576 | 705 | 94.6 | Minus |
2L | 23513712 | 2L | 9789536..9789631 | 97..2 | 315 | 88.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9790952..9791694 | 1..743 | 3715 | 100 | Plus |
2L | 23513712 | 2L | 9791755..9791958 | 744..947 | 1020 | 100 | Plus |
2L | 23513712 | 2L | 9789367..9789534 | 743..576 | 705 | 94.6 | Minus |
2L | 23513712 | 2L | 9789536..9789631 | 97..2 | 315 | 88.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 9789794..9790536 | 1..743 | 99 | -> | Plus |
chr2L | 9790597..9790800 | 744..947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4036-RA | 1..915 | 19..933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4036-RC | 1..915 | 19..933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4036-RA | 1..915 | 19..933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4036-RA | 1..915 | 19..933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4036-RA | 1..915 | 19..933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4036-RA | 1..947 | 1..947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4036-RA | 38..984 | 1..947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4036-RA | 56..1002 | 1..947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4036-RA | 1..947 | 1..947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4036-RA | 56..1002 | 1..947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9791755..9791958 | 744..947 | 100 | Plus | |
2L | 9790952..9791694 | 1..743 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9791755..9791958 | 744..947 | 100 | Plus | |
2L | 9790952..9791694 | 1..743 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9791755..9791958 | 744..947 | 100 | Plus | |
2L | 9790952..9791694 | 1..743 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 9790952..9791694 | 1..743 | 100 | -> | Plus |
arm_2L | 9791755..9791958 | 744..947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9790952..9791694 | 1..743 | 100 | -> | Plus |
2L | 9791755..9791958 | 744..947 | 100 | Plus |
Translation from 0 to 932
> LD42289.hyp LLPNFRMNTIRPCGCKGVRTCLSCEQDFHIAKTSLREQFQQLEAWSYCIQ CDLLQRGWDTNHVQKDHENHKKDEGLPLPGILVQEEFLSVDEGAQLIADL DDLPWDISQSGRRKQNFGPKTNFKKRKLRLGSFAGFPRTTEYVQRRFEDV PLLRGFQTIEQCSLEYEPSKGASIDPHVDDCWIWGERVVTVNCLGDSVLT LTPYEVQQSGKYNLDLVASYEDELLAPLLTDDQLATFEGKVLRIPMPNLS LIVLYGPARYQFEHSVLREDVQERRVCVAYREFTPMYINGVDIQKGDPVR EKSQIFWQIN*
Translation from 18 to 932
> LD42289.pep MNTIRPCGCKGVRTCLSCEQDFHIAKTSLREQFQQLEAWSYCIQCDLLQR GWDTNHVQKDHENHKKDEGLPLPGILVQEEFLSVDEGAQLIADLDDLPWD ISQSGRRKQNFGPKTNFKKRKLRLGSFAGFPRTTEYVQRRFEDVPLLRGF QTIEQCSLEYEPSKGASIDPHVDDCWIWGERVVTVNCLGDSVLTLTPYEV QQSGKYNLDLVASYEDELLAPLLTDDQLATFEGKVLRIPMPNLSLIVLYG PARYQFEHSVLREDVQERRVCVAYREFTPMYINGVDIQKGDPVREKSQIF WQIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22814-PA | 304 | GF22814-PA | 1..303 | 1..303 | 1345 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10057-PA | 304 | GG10057-PA | 1..304 | 1..304 | 1518 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13824-PA | 307 | GH13824-PA | 1..304 | 1..303 | 1249 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4036-PB | 304 | CG4036-PB | 1..304 | 1..304 | 1635 | 100 | Plus |
CG4036-PA | 304 | CG4036-PA | 1..304 | 1..304 | 1635 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20151-PA | 304 | GI20151-PA | 1..296 | 1..296 | 1212 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18936-PA | 304 | GL18936-PA | 1..304 | 1..304 | 1308 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25863-PA | 304 | GA25863-PA | 1..304 | 1..304 | 1323 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17708-PA | 389 | GM17708-PA | 86..389 | 1..304 | 1604 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23631-PA | 349 | GD23631-PA | 44..349 | 20..304 | 764 | 54 | Plus |
Dsim\GD17818-PA | 58 | GD17818-PA | 1..29 | 1..29 | 139 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13536-PA | 306 | GJ13536-PA | 1..303 | 1..303 | 1233 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24867-PA | 307 | GK24867-PA | 1..306 | 1..303 | 1260 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18871-PA | 304 | GE18871-PA | 1..304 | 1..304 | 1512 | 92.4 | Plus |