BDGP Sequence Production Resources |
Search the DGRC for LD42868
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 428 |
Well: | 68 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4041-RB |
Protein status: | LD42868.pep: gold |
Sequenced Size: | 2680 |
Gene | Date | Evidence |
---|---|---|
CG4041 | 2008-04-29 | Release 5.5 accounting |
CG4041 | 2008-04-29 | Picked prior to 5.5 |
CG4041 | 2008-08-15 | Release 5.9 accounting |
CG4041 | 2008-12-18 | 5.12 accounting |
2680 bp assembled on 2007-11-15
GenBank Submission: BT031268
> LD42868.complete CTGATGCTGGCGTGAAGTCCAAGGAAATCGCTGTGATTTGCAAATCGCAT CGAGATCATGGGCACGCGGGAGCGCGAAAGGGAGTGCCGCCTGTGCGCGG TCACCTTCTTCGCGAAACTGCATCCCGGCGACGTGTGCGGCAGCAACGGC CTGCCCCTAACGCCCAACTCGATTGCGATCCTGGGGCGTGCCCAGAAACT GAAGGAGCTGCAGGACGAGCACCTGTGCCAGTACCTGGATGTGATCCGCG GCAAACACGAGCGCACCATTGTGGTTTCGGAGTATCTGGGACTCTCACTG GAGGACTACGCCATGCGTCATCCACCGCTGGCCATTGCCCAGATACTGAG AATCTTCTACCAGGTGGCGTGCGGCATCAATGTGCTGAGTCGACACCATC TGGTGGCCCACAACGTGGAGCCCAAGCACATTCTACTCTCCAGCGATGGG CAGCGGGTGAAGCTCTTCAACTACGGGCTGCATCACATGACCAAGGGCGG TGCCTATGTGCCCTTTCCCATTGGCAACATTCGCTACATGGCACCCGAAC GACTGCTCGGTCTGAATGGCAATGTGAAGAGCGACGTTTGGTCGCTGGCC CTGGTAATGGTGGAGCTAATATTGCAGATCGAGCTGTGGCCGAAGCTCAA GCTCTCGAATGTGGTTAGAAAGATCCTGGCCTTTGGCAAGAGCAACGGGG CGTTGGAGAAGATTGCGCGAGAGCACCAGTGTCACGAGCGCTATGTGCAG ATGGATCAGCGCCTGCGACAGCTGCTGGAGAGCTGTTTAAGTGTACTGCC CAAGAGGAGACCACTGCCAGGTGAGCTCTTGGAACATCCCATTTTCGAGG AAGTCCTATTGGATTTGAAGAAACAGAAGATGCAGCCACTGAGCCCAGAA ACCGAACATTTACCGCTGCTGCTGCGATGTCCCTTGTCGCAGATCTACCA CCTGTGGCAACTGGCCGGCGGAGATGTGCAGGCGGAGCTGAAAAAGGAGG GCCTCATCCGGAGTGAGGCACCCATTTTGGGTCTGCCACAAATCGTTCGC CTGAGCGGCGCCAGCGTTTGTCCCGGCCGAAGCCAGGCGCAGCTGATGGA CGATCGCGTGGTGCCGCTGCGCCTGAAGGCGCTGCTCCAGCGACTGAGTG GCCTGCCGGCCGCAGTCTACTTTCCCCTGCTCCACTCGCCGCGTTTTCCC GCCCACTTTGCCCGCGAATTGCAGGAACTGCCGCTGGTGATCCGCGAAAA GGACATCGAGTATCAGTTTCAGCGCGTGCGACTTTTTGCGCGCCTGCTCC AGGGCTATCCGCATACGGCGGAGCAGCTGCAGCGCGAGGCAGCCGTGGAT GTGCCGCCGCTACTGAGGGGTCCCATTTGGGCCGCCCTGCTGGAGGTTGT GCCCAATGGCAGTTACGCGAAGATCGACAAGTTTACGTCTACGAGCACGG ATCGGCAGATCGAGGTGGATATACCGCGCTGCCATCAGTACGATGAGCTG CTCTCCTCGCCGGATGGCCACCGCAAGCTGAGGCGGCTGCTCAAGGCCTG GGTCACCGCCCATCCGCAGTACGTCTACTGGCAGGGACTGGACTCACTGA CGGCACCGTTTCTCTATCTCAACTTTAACAATGAAGAGTTGGCCTTCCTC AGCTTGTTCAAGTTCATTCCAAAGTATCTGCAATGGTTCTTTCTCAAGGA TAATTCGGCGGTGATCAAGGAGTACCTGAGCAAGTTCTCCCAGCTGACTG CCTTCCATGAGCCGCTTCTCGCTCAGCATTTGGCCAGCATTAGCTTTATA CCCGAGTTGTTTGCCATCCCGTGGTTCCTAACCATGTTCTCGCATGTATT CCCGCTGCACAAGATCCTGCATTTGTGGGATAAACTCATGCTGGGCGATA GTTCGTATCCGCTGTTCATTGGCATCGCCATATTGCGCCAGCTGAGAAGC ACGCTGCTCACCTCCGGTTTCAACGAGTGCATCCTGCTCTTCTCCGACCT GCCCGATATCGTGATGGATGGCTGTGTGCTGGAGTCACAGAAGATGTACG AAGCCACACCGAAGAGTATTACTCATCGCCAGCACGCGTTGCGCCTCCAG CCGCCACAGGCGTTGGACATTGGCGTGGCGGATGTCGAGCTGAAGCACCT GCAACAGGAGCAGTGCCCCCGGATCAGCGCCAAGGATGTGCAATTCCTGT TGGACAATTCGCCAGCGGAGCTGGCCCTCATCGATTTGCGCAGTGTAGTC GAGTTCGGACGCGTCCATGTGCCGCATAGCATCAACATACCGTTCGCCAC CGTCCAGTTGGGTGAACAGCGATTGGAGGCCCTGCAGGTGCCCCAATTGG AGGCGCAGCTCCGCGGCAAGATCGTCGTCTGCGTGAGCAATATCCATCAG CACTCCGTGGAGTTCTCGCACTTTCTGGTGGCCTGCGGTGTCCAGCGCAC CTGTATCCTTCACAAAGGATTCAACGTCCTGCACTCCATCGAGCCAAATA TACTCATCTCGAATTGAGCTCCCGACTTGCTGATCCTTTCTTGTTGGCCT CATCGCTTCTGCTCGTCTACGCTAAGCTCAATGTACATTTATTATCTATC TTTTTTAAACGGATTGCATTTGCAAATAAACTATATATACATATATGTAT TATATAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4041-RB | 2960 | CG4041-RB | 195..2853 | 1..2659 | 13295 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 4809281..4810658 | 1636..259 | 6875 | 99.9 | Minus |
chrX | 22417052 | chrX | 4808322..4808619 | 2412..2115 | 1490 | 100 | Minus |
chrX | 22417052 | chrX | 4808678..4808950 | 2116..1844 | 1365 | 100 | Minus |
chrX | 22417052 | chrX | 4810855..4811113 | 259..1 | 1280 | 99.6 | Minus |
chrX | 22417052 | chrX | 4808016..4808260 | 2655..2411 | 1195 | 99.2 | Minus |
chrX | 22417052 | chrX | 4809021..4809229 | 1843..1635 | 1030 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 4916545..4917922 | 1636..259 | 6890 | 100 | Minus |
X | 23542271 | X | 4915586..4915883 | 2412..2115 | 1490 | 100 | Minus |
X | 23542271 | X | 4915942..4916214 | 2116..1844 | 1365 | 100 | Minus |
X | 23542271 | X | 4918121..4918379 | 259..1 | 1295 | 100 | Minus |
X | 23542271 | X | 4915276..4915524 | 2659..2411 | 1245 | 100 | Minus |
X | 23542271 | X | 4916285..4916493 | 1843..1635 | 1045 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 4924643..4926020 | 1636..259 | 6890 | 100 | Minus |
X | 23527363 | X | 4923684..4923981 | 2412..2115 | 1490 | 100 | Minus |
X | 23527363 | X | 4924040..4924312 | 2116..1844 | 1365 | 100 | Minus |
X | 23527363 | X | 4926219..4926477 | 259..1 | 1295 | 100 | Minus |
X | 23527363 | X | 4923374..4923622 | 2659..2411 | 1245 | 100 | Minus |
X | 23527363 | X | 4924383..4924591 | 1843..1635 | 1045 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 4808016..4808258 | 2413..2655 | 99 | <- | Minus |
chrX | 4808322..4808618 | 2116..2412 | 100 | <- | Minus |
chrX | 4808679..4808950 | 1844..2115 | 100 | <- | Minus |
chrX | 4809021..4809227 | 1637..1843 | 99 | <- | Minus |
chrX | 4809281..4810657 | 260..1636 | 99 | <- | Minus |
chrX | 4810855..4811113 | 1..259 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4041-RA | 1..2355 | 58..2412 | 100 | -> | Plus |
CG4041-RA | 2419..2523 | 2413..2517 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4041-RB | 1..2460 | 58..2517 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4041-RB | 1..2460 | 58..2517 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4041-RA | 1..2355 | 58..2412 | 100 | -> | Plus |
CG4041-RA | 2419..2523 | 2413..2517 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4041-RB | 1..2460 | 58..2517 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4041-RA | 67..2478 | 1..2412 | 100 | -> | Plus |
CG4041-RA | 2542..2646 | 2413..2517 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4041-RB | 67..2721 | 1..2655 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4041-RB | 69..2723 | 1..2655 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4041-RA | 2542..2646 | 2413..2517 | 100 | Plus | |
CG4041-RA | 67..2478 | 1..2412 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4041-RB | 69..2723 | 1..2655 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4915280..4915522 | 2413..2655 | 100 | <- | Minus |
X | 4915586..4915882 | 2116..2412 | 100 | <- | Minus |
X | 4915943..4916214 | 1844..2115 | 100 | <- | Minus |
X | 4916285..4916491 | 1637..1843 | 100 | <- | Minus |
X | 4916545..4917921 | 260..1636 | 100 | <- | Minus |
X | 4918121..4918379 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4915280..4915522 | 2413..2655 | 100 | <- | Minus |
X | 4915586..4915882 | 2116..2412 | 100 | <- | Minus |
X | 4915943..4916214 | 1844..2115 | 100 | <- | Minus |
X | 4916285..4916491 | 1637..1843 | 100 | <- | Minus |
X | 4916545..4917921 | 260..1636 | 100 | <- | Minus |
X | 4918121..4918379 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4915280..4915522 | 2413..2655 | 100 | <- | Minus |
X | 4915586..4915882 | 2116..2412 | 100 | <- | Minus |
X | 4915943..4916214 | 1844..2115 | 100 | <- | Minus |
X | 4916285..4916491 | 1637..1843 | 100 | <- | Minus |
X | 4916545..4917921 | 260..1636 | 100 | <- | Minus |
X | 4918121..4918379 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 4809619..4809915 | 2116..2412 | 100 | <- | Minus |
arm_X | 4809976..4810247 | 1844..2115 | 100 | <- | Minus |
arm_X | 4810318..4810524 | 1637..1843 | 100 | <- | Minus |
arm_X | 4809313..4809555 | 2413..2655 | 100 | <- | Minus |
arm_X | 4810578..4811954 | 260..1636 | 100 | <- | Minus |
arm_X | 4812154..4812412 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4923378..4923620 | 2413..2655 | 100 | <- | Minus |
X | 4923684..4923980 | 2116..2412 | 100 | <- | Minus |
X | 4924041..4924312 | 1844..2115 | 100 | <- | Minus |
X | 4924383..4924589 | 1637..1843 | 100 | <- | Minus |
X | 4924643..4926019 | 260..1636 | 100 | <- | Minus |
X | 4926219..4926477 | 1..259 | 100 | Minus |
Translation from 57 to 2516
> LD42868.pep MGTRERERECRLCAVTFFAKLHPGDVCGSNGLPLTPNSIAILGRAQKLKE LQDEHLCQYLDVIRGKHERTIVVSEYLGLSLEDYAMRHPPLAIAQILRIF YQVACGINVLSRHHLVAHNVEPKHILLSSDGQRVKLFNYGLHHMTKGGAY VPFPIGNIRYMAPERLLGLNGNVKSDVWSLALVMVELILQIELWPKLKLS NVVRKILAFGKSNGALEKIAREHQCHERYVQMDQRLRQLLESCLSVLPKR RPLPGELLEHPIFEEVLLDLKKQKMQPLSPETEHLPLLLRCPLSQIYHLW QLAGGDVQAELKKEGLIRSEAPILGLPQIVRLSGASVCPGRSQAQLMDDR VVPLRLKALLQRLSGLPAAVYFPLLHSPRFPAHFARELQELPLVIREKDI EYQFQRVRLFARLLQGYPHTAEQLQREAAVDVPPLLRGPIWAALLEVVPN GSYAKIDKFTSTSTDRQIEVDIPRCHQYDELLSSPDGHRKLRRLLKAWVT AHPQYVYWQGLDSLTAPFLYLNFNNEELAFLSLFKFIPKYLQWFFLKDNS AVIKEYLSKFSQLTAFHEPLLAQHLASISFIPELFAIPWFLTMFSHVFPL HKILHLWDKLMLGDSSYPLFIGIAILRQLRSTLLTSGFNECILLFSDLPD IVMDGCVLESQKMYEATPKSITHRQHALRLQPPQALDIGVADVELKHLQQ EQCPRISAKDVQFLLDNSPAELALIDLRSVVEFGRVHVPHSINIPFATVQ LGEQRLEALQVPQLEAQLRGKIVVCVSNIHQHSVEFSHFLVACGVQRTCI LHKGFNVLHSIEPNILISN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20338-PA | 816 | GF20338-PA | 4..816 | 7..819 | 3774 | 88.6 | Plus |
Dana\GF21013-PA | 581 | GF21013-PA | 66..238 | 38..206 | 157 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18512-PA | 819 | GG18512-PA | 1..819 | 1..819 | 4268 | 98.5 | Plus |
Dere\GG12850-PA | 582 | GG12850-PA | 66..238 | 38..206 | 157 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12593-PA | 841 | GH12593-PA | 5..841 | 2..819 | 3358 | 77.4 | Plus |
Dgri\GH12117-PA | 589 | GH12117-PA | 78..238 | 46..206 | 158 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4041-PB | 819 | CG4041-PB | 1..819 | 1..819 | 4258 | 100 | Plus |
AMPKalpha-PC | 582 | CG3051-PC | 78..220 | 46..188 | 165 | 27.8 | Plus |
AMPKalpha-PB | 582 | CG3051-PB | 78..220 | 46..188 | 165 | 27.8 | Plus |
AMPKalpha-PA | 582 | CG3051-PA | 78..220 | 46..188 | 165 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16222-PA | 832 | GI16222-PA | 15..832 | 11..819 | 3330 | 78.2 | Plus |
Dmoj\GI16329-PA | 589 | GI16329-PA | 84..244 | 46..206 | 158 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14810-PA | 825 | GL14810-PA | 6..825 | 9..819 | 3560 | 83.7 | Plus |
Dper\GL14247-PA | 581 | GL14247-PA | 78..238 | 46..206 | 157 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17907-PA | 825 | GA17907-PA | 6..825 | 9..819 | 3568 | 83.7 | Plus |
Dpse\GA15892-PA | 587 | GA15892-PA | 78..238 | 46..206 | 158 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12660-PA | 819 | GM12660-PA | 1..819 | 1..819 | 4302 | 99.3 | Plus |
Dsec\GM19132-PA | 565 | GM19132-PA | 78..238 | 46..206 | 156 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16270-PA | 819 | GD16270-PA | 1..819 | 1..819 | 4288 | 99.3 | Plus |
Dsim\GD16554-PA | 582 | GD16554-PA | 66..238 | 38..206 | 157 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15914-PA | 834 | GJ15914-PA | 13..834 | 12..819 | 3265 | 77.6 | Plus |
Dvir\GJ15670-PA | 568 | GJ15670-PA | 55..213 | 38..206 | 156 | 27.6 | Plus |
Translation from 57 to 2516
> LD42868.hyp MGTRERERECRLCAVTFFAKLHPGDVCGSNGLPLTPNSIAILGRAQKLKE LQDEHLCQYLDVIRGKHERTIVVSEYLGLSLEDYAMRHPPLAIAQILRIF YQVACGINVLSRHHLVAHNVEPKHILLSSDGQRVKLFNYGLHHMTKGGAY VPFPIGNIRYMAPERLLGLNGNVKSDVWSLALVMVELILQIELWPKLKLS NVVRKILAFGKSNGALEKIAREHQCHERYVQMDQRLRQLLESCLSVLPKR RPLPGELLEHPIFEEVLLDLKKQKMQPLSPETEHLPLLLRCPLSQIYHLW QLAGGDVQAELKKEGLIRSEAPILGLPQIVRLSGASVCPGRSQAQLMDDR VVPLRLKALLQRLSGLPAAVYFPLLHSPRFPAHFARELQELPLVIREKDI EYQFQRVRLFARLLQGYPHTAEQLQREAAVDVPPLLRGPIWAALLEVVPN GSYAKIDKFTSTSTDRQIEVDIPRCHQYDELLSSPDGHRKLRRLLKAWVT AHPQYVYWQGLDSLTAPFLYLNFNNEELAFLSLFKFIPKYLQWFFLKDNS AVIKEYLSKFSQLTAFHEPLLAQHLASISFIPELFAIPWFLTMFSHVFPL HKILHLWDKLMLGDSSYPLFIGIAILRQLRSTLLTSGFNECILLFSDLPD IVMDGCVLESQKMYEATPKSITHRQHALRLQPPQALDIGVADVELKHLQQ EQCPRISAKDVQFLLDNSPAELALIDLRSVVEFGRVHVPHSINIPFATVQ LGEQRLEALQVPQLEAQLRGKIVVCVSNIHQHSVEFSHFLVACGVQRTCI LHKGFNVLHSIEPNILISN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4041-PB | 819 | CG4041-PB | 1..819 | 1..819 | 4258 | 100 | Plus |
AMPKalpha-PC | 582 | CG3051-PC | 78..220 | 46..188 | 165 | 27.8 | Plus |
AMPKalpha-PB | 582 | CG3051-PB | 78..220 | 46..188 | 165 | 27.8 | Plus |
AMPKalpha-PA | 582 | CG3051-PA | 78..220 | 46..188 | 165 | 27.8 | Plus |