Clone LD42896 Report

Search the DGRC for LD42896

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:428
Well:96
Vector:pOT2
Associated Gene/Transcriptgrp-RA
Protein status:LD42896.pep: gold
Preliminary Size:2597
Sequenced Size:2561

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17161 2001-01-01 Release 2 assignment
CG17161 2001-07-04 Blastp of sequenced clone
CG17161 2003-01-01 Sim4 clustering to Release 3
grp 2008-04-29 Release 5.5 accounting
grp 2008-08-15 Release 5.9 accounting
grp 2008-12-18 5.12 accounting

Clone Sequence Records

LD42896.complete Sequence

2561 bp (2561 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051961

> LD42896.complete
ACAGGACGAAGCGCCTGCCACAGGATATGGCTGGGAAACTATAGTGGAAA
CCTACGCCGCTATGTAATAGTAAATTAATAGTAGTTCTCTACTACTGCAG
TAGTAGGCGGCGCTTTTCAATCGTATTGAAAGGAATACAATGACGGGGGC
AAGAGAGAAACGAACGGAGAAAGAGTGCACGGACCACGAGGCTGTTTCAT
TAAAATTGGGATACAGACAAAACGTGGCTCGCAGGATACCGGATACGTCT
GTGTGCGTGTGTGTGCCGCATCCATTCAGGAGGCTAAGAAAAAGGACGGC
ACACAGTTTTCAGTGGTGACTTTCTCGGCAAAATCCTAAAAAAGGACAAA
ACGGTTCGGTTCCTATTTGGTTTCTCGACTTTCGGTCTTCGGGGTAGTTC
CTTAGTCTCTCAGAATAGCAAGATGATAAACCTGAAAAAGAAGAAGAAGC
CGTCCAAGAAGCAGCTTCGCAAAAATTCCGCGCTTTGGCTCTCAATCGCC
AACAATTCGTCGGAAATCAAGAAAAATATATGCACGAGGTGGCGAAAGCT
GAGCTAGAATCGGGCGGCAGATGACAAGGACAACGCCACGCACATGGCGG
CAAGGCTACAACAAGGATACAGGATACGGCCAACCGGATATTAAACCATC
AACACTAGCCAGCACAGCAAAGCAAAATTAAGGAACAACTGCAATCCCGG
TACACCAGTACACCATGGCTGCAACGCTGACGGAAGCGGGAACAGGTCCT
GCGGCCACCAGGGAGTTCGTCGAGGGATGGACTTTGGCCCAAACTCTGGG
CGAAGGTGCCTACGGCGAGGTAAAGCTACTAATCAACCGGCAGACTGGCG
AGGCTGTGGCCATGAAAATGGTGGATCTAAAAAAACATCCGGATGCAGCG
AACTCGGTGCGAAAGGAGGTATGCATACAGAAGATGCTCCAGGATAAGCA
TATCCTCCGATTTTTCGGCAAACGTTCGCAAGGCAGTGTGGAGTACATAT
TCCTGGAATACGCCGCCGGCGGAGAGCTATTCGATCGAATAGAACCAGAC
GTGGGAATGCCGCAGCATGAGGCTCAAAGGTATTTTACACAGCTCCTGTC
CGGACTCAATTACCTGCATCAGCGTGGGATCGCTCATCGGGATCTGAAGC
CGGAAAATCTGCTGCTTGACGAGCATGACAACGTGAAAATATCGGACTTT
GGCATGGCTACTATGTTTAGGTGCAAGGGCAAGGAGCGACTGCTGGACAA
ACGCTGCGGCACCTTGCCGTATGTGGCGCCCGAGGTGCTACAGAAGGCAT
ATCACGCCCAGCCGGCGGATCTCTGGTCGTGTGGCGTTATATTGGTGACA
ATGCTGGCGGGTGAGCTGCCCTGGGATCAGCCGTCCACCAATTGCACGGA
GTTCACCAACTGGAGGGATAACGATCACTGGCAACTGCAGACTCCTTGGA
GCAAACTGGACACCTTGGCTATTTCGCTGCTTCGCAAGCTGCTGGCCACC
AGTCCTGGCACGCGTTTGACCCTGGAGAAAACCCTGGATCACAAATGGTG
CAACATGCAGTTTGCAGACAATGAACGTTCCTATGACCTGGTGGACTCGG
CGGCTGCCCTGGAGATATGCTCGCCAAAGGCTAAGAGGCAGCGTCTGCAG
TCTAGTGCCCACTTGAGCAATGGCCTGGATGACTCCATCTCCCGGAACTA
CTGCTCTCAACCCATGCCCACAATGCGCAGCGACGATGACTTCAATGTCA
GACTGGGCAGTGGCCGATCCAAGGAGGATGGAGGCGACCGCCAGACGTTG
GCCCAGGAGGCTCGGCTCAGTTACTCCTTCTCGCAACCAGCTTTGCTTGA
TGATCTCCTACTGGCTACCCAGATGAACCAAACGCAGAACGCTTCCCAGA
ACTATTTCCAGCGTTTGGTGAGGAGAATGACCCGATTCTTTGTGACCACA
CGATGGGATGACACTATCAAGCGATTGGTGGGAACCATCGAAAGACTGGG
TGGTTATACGTGCAAATTTGGTGACGACGGAGTGGTCACCGTATCCACAG
TCGATCGGAATAAGCTGCGATTGGTTTTCAAGGCACACATTATAGAGATG
GATGGCAAGATTCTTGTTGACTGCCGGCTGTCAAAGGGTTGCGGCTTGGA
GTTTAAACGACGATTTATCAAGATCAAAAACGCCCTGGAGGATATCGTGC
TTAAAGGACCCACCACCTGGCCGATTGCGATTGCTACAAATTCGGTGCCT
TAGCTTTTAGTTTCATTCGAACTTAAAATCCTGTCTTGTCTTGTATTCGG
TTATATTTACATTTGTCTAGCCTGTAAGAGCAACTCATGCATCACCTTCG
ATCAGAATCATCTAAAATTCTCAATGTGCTAACTTATTTTTAATTCATTG
CATTGTTTACGAGTACGTTGTGTATTGCTAAGCGGGCTCTCATTCGATTT
TAATTTTGTTGAATTTTAAAGCAAAAGTCGAGTATTGAAAACTAGTTTAA
ATGTTATCGAACAATAAATCTTATGCGATTTTGAGTAGAAAAAAAAAAAA
AAAAAAAAAAA

LD42896.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:28:43
Subject Length Description Subject Range Query Range Score Percent Strand
grp-RA 2804 grp-RA 263..2804 1..2542 12710 100 Plus
grp-RC 2352 grp-RC 338..2352 524..2538 10060 99.9 Plus
grp-RB 2242 grp-RB 232..2242 528..2538 10055 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:47:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 16697668..16698633 1573..2538 4770 99.6 Plus
chr2L 23010047 chr2L 16684117..16684643 1..527 2620 99.8 Plus
chr2L 23010047 chr2L 16689608..16689899 528..819 1460 100 Plus
chr2L 23010047 chr2L 16690607..16690830 819..1042 1120 100 Plus
chr2L 23010047 chr2L 16696845..16697055 1363..1573 1055 100 Plus
chr2L 23010047 chr2L 16695290..16695471 1041..1222 910 100 Plus
chr2L 23010047 chr2L 16696206..16696350 1219..1363 725 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:38:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:47:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16698961..16699930 1573..2542 4850 100 Plus
2L 23513712 2L 16685415..16685941 1..527 2635 100 Plus
2L 23513712 2L 16690902..16691193 528..819 1460 100 Plus
2L 23513712 2L 16691901..16692124 819..1042 1120 100 Plus
2L 23513712 2L 16698138..16698348 1363..1573 1055 100 Plus
2L 23513712 2L 16696583..16696764 1041..1222 910 100 Plus
2L 23513712 2L 16697499..16697643 1219..1363 725 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:51:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16698961..16699930 1573..2542 4850 100 Plus
2L 23513712 2L 16685415..16685941 1..527 2635 100 Plus
2L 23513712 2L 16690902..16691193 528..819 1460 100 Plus
2L 23513712 2L 16691901..16692124 819..1042 1120 100 Plus
2L 23513712 2L 16698138..16698348 1363..1573 1055 100 Plus
2L 23513712 2L 16696583..16696764 1041..1222 910 100 Plus
2L 23513712 2L 16697499..16697643 1219..1363 725 100 Plus
Blast to na_te.dros performed on 2019-03-15 19:47:50 has no hits.

LD42896.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:48:55 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 16684117..16684643 1..527 99 -> Plus
chr2L 16689608..16689898 528..818 100 -> Plus
chr2L 16690607..16690830 819..1042 100 -> Plus
chr2L 16695292..16695469 1043..1220 100 -> Plus
chr2L 16696208..16696350 1221..1363 100 -> Plus
chr2L 16696846..16697055 1364..1573 100 -> Plus
chr2L 16697669..16698633 1574..2538 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:44:05 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
grp-RA 1..1539 715..2253 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:16:07 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
grp-RA 1..1539 715..2253 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:02:03 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
grp-RC 1..1539 715..2253 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:47:34 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
grp-RA 1..1539 715..2253 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:07:40 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
grp-RC 1..1539 715..2253 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:44:04 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
grp-RA 239..2776 1..2538 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:16:07 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
grp-RA 239..2776 1..2538 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:03 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
grp-RA 26..2563 1..2538 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:47:34 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
grp-RA 239..2776 1..2538 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:07:40 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
grp-RA 26..2563 1..2538 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:48:55 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16685415..16685941 1..527 100 -> Plus
2L 16690902..16691192 528..818 100 -> Plus
2L 16691901..16692124 819..1042 100 -> Plus
2L 16696585..16696762 1043..1220 100 -> Plus
2L 16697501..16697643 1221..1363 100 -> Plus
2L 16698139..16698348 1364..1573 100 -> Plus
2L 16698962..16699926 1574..2538 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:48:55 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16685415..16685941 1..527 100 -> Plus
2L 16690902..16691192 528..818 100 -> Plus
2L 16691901..16692124 819..1042 100 -> Plus
2L 16696585..16696762 1043..1220 100 -> Plus
2L 16697501..16697643 1221..1363 100 -> Plus
2L 16698139..16698348 1364..1573 100 -> Plus
2L 16698962..16699926 1574..2538 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:48:55 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16685415..16685941 1..527 100 -> Plus
2L 16690902..16691192 528..818 100 -> Plus
2L 16691901..16692124 819..1042 100 -> Plus
2L 16696585..16696762 1043..1220 100 -> Plus
2L 16697501..16697643 1221..1363 100 -> Plus
2L 16698139..16698348 1364..1573 100 -> Plus
2L 16698962..16699926 1574..2538 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:03 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16698962..16699926 1574..2538 100   Plus
arm_2L 16685415..16685941 1..527 100 -> Plus
arm_2L 16690902..16691192 528..818 100 -> Plus
arm_2L 16691901..16692124 819..1042 100 -> Plus
arm_2L 16696585..16696762 1043..1220 100 -> Plus
arm_2L 16697501..16697643 1221..1363 100 -> Plus
arm_2L 16698139..16698348 1364..1573 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:25:33 Download gff for LD42896.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16696585..16696762 1043..1220 100 -> Plus
2L 16697501..16697643 1221..1363 100 -> Plus
2L 16698139..16698348 1364..1573 100 -> Plus
2L 16690902..16691192 528..818 100 -> Plus
2L 16685415..16685941 1..527 100 -> Plus
2L 16691901..16692124 819..1042 100 -> Plus
2L 16698962..16699926 1574..2538 100   Plus

LD42896.pep Sequence

Translation from 714 to 2252

> LD42896.pep
MAATLTEAGTGPAATREFVEGWTLAQTLGEGAYGEVKLLINRQTGEAVAM
KMVDLKKHPDAANSVRKEVCIQKMLQDKHILRFFGKRSQGSVEYIFLEYA
AGGELFDRIEPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHRDLKPENLL
LDEHDNVKISDFGMATMFRCKGKERLLDKRCGTLPYVAPEVLQKAYHAQP
ADLWSCGVILVTMLAGELPWDQPSTNCTEFTNWRDNDHWQLQTPWSKLDT
LAISLLRKLLATSPGTRLTLEKTLDHKWCNMQFADNERSYDLVDSAAALE
ICSPKAKRQRLQSSAHLSNGLDDSISRNYCSQPMPTMRSDDDFNVRLGSG
RSKEDGGDRQTLAQEARLSYSFSQPALLDDLLLATQMNQTQNASQNYFQR
LVRRMTRFFVTTRWDDTIKRLVGTIERLGGYTCKFGDDGVVTVSTVDRNK
LRLVFKAHIIEMDGKILVDCRLSKGCGLEFKRRFIKIKNALEDIVLKGPT
TWPIAIATNSVP*

LD42896.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:19:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14005-PA 519 GF14005-PA 23..519 13..512 2357 89.6 Plus
Dana\GF11717-PA 1419 GF11717-PA 479..779 14..314 462 36.2 Plus
Dana\GF21013-PA 581 GF21013-PA 28..336 22..329 440 32.5 Plus
Dana\GF10369-PA 863 GF10369-PA 13..268 17..278 422 36 Plus
Dana\GF18162-PA 741 GF18162-PA 136..441 22..331 419 33.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:19:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22761-PA 512 GG22761-PA 1..512 1..512 2709 98 Plus
Dere\GG21978-PA 1223 GG21978-PA 488..755 14..287 451 37.7 Plus
Dere\GG17228-PA 585 GG17228-PA 42..336 9..294 446 35.3 Plus
Dere\GG12850-PA 582 GG12850-PA 28..336 22..329 434 32.2 Plus
Dere\GG13513-PA 861 GG13513-PA 13..268 17..278 425 36.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:19:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25199-PA 498 GH25199-PA 12..498 16..512 2394 89.1 Plus
Dgri\GH20210-PA 1146 GH20210-PA 479..746 14..287 447 37.7 Plus
Dgri\GH12117-PA 589 GH12117-PA 28..336 22..329 433 31.9 Plus
Dgri\GH14360-PA 865 GH14360-PA 13..268 17..278 424 36.4 Plus
Dgri\GH24031-PA 711 GH24031-PA 106..425 22..332 417 32.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:09:40
Subject Length Description Subject Range Query Range Score Percent Strand
grp-PA 512 CG17161-PA 1..512 1..512 2688 100 Plus
grp-PB 512 CG17161-PB 1..512 1..512 2688 100 Plus
grp-PC 512 CG17161-PC 1..512 1..512 2688 100 Plus
grp-PF 398 CG17161-PF 1..398 115..512 2105 100 Plus
grp-PD 398 CG17161-PD 1..398 115..512 2105 100 Plus
par-1-PV 951 CG8201-PV 245..570 14..355 449 34.7 Plus
par-1-PT 1058 CG8201-PT 473..798 14..355 449 34.7 Plus
par-1-PP 1141 CG8201-PP 473..798 14..355 449 34.7 Plus
par-1-PS 827 CG8201-PS 245..567 14..355 445 34.6 Plus
par-1-PW 832 CG8201-PW 245..567 14..355 445 34.6 Plus
par-1-PL 833 CG8201-PL 245..567 14..355 445 34.6 Plus
par-1-PA 938 CG8201-PA 245..567 14..355 445 34.6 Plus
par-1-PH 993 CG8201-PH 368..690 14..355 445 34.6 Plus
par-1-PR 1046 CG8201-PR 473..795 14..355 445 34.6 Plus
par-1-PX 1170 CG8201-PX 245..567 14..355 445 34.6 Plus
AMPKalpha-PC 582 CG3051-PC 8..336 2..329 418 31.5 Plus
AMPKalpha-PB 582 CG3051-PB 8..336 2..329 418 31.5 Plus
AMPKalpha-PA 582 CG3051-PA 8..336 2..329 418 31.5 Plus
sff-PB 845 CG6114-PB 13..268 17..278 410 36.4 Plus
sff-PC 851 CG6114-PC 13..268 17..278 410 36.4 Plus
sff-PA 861 CG6114-PA 13..268 17..278 410 36.4 Plus
KP78a-PB 705 CG6715-PB 98..392 22..325 402 32.4 Plus
KP78b-PB 604 CG17216-PB 63..318 22..283 390 36.2 Plus
KP78b-PA 604 CG17216-PA 63..318 22..283 390 36.2 Plus
Sik3-PA 702 CG15072-PA 41..398 22..374 390 29.2 Plus
Sik3-PF 1379 CG42856-PF 41..398 22..374 390 29.2 Plus
Sik3-PE 1382 CG42856-PE 41..398 22..374 390 29.2 Plus
Sik3-PD 1468 CG42856-PD 41..398 22..374 390 29.2 Plus
Sik3-PC 1471 CG18604-PA 41..398 22..374 390 29.2 Plus
Sik3-PB 1471 CG15072-PB 41..398 22..374 390 29.2 Plus
CG43143-PD 1180 CG11870-PD 72..337 24..297 380 33.5 Plus
CG43143-PG 1199 CG43143-PG 72..337 24..297 380 33.5 Plus
CG43143-PB 1427 CG11870-PB 72..337 24..297 380 33.5 Plus
CG43143-PC 1427 CG11870-PC 72..337 24..297 380 33.5 Plus
CG43143-PA 1427 CG11870-PA 72..337 24..297 380 33.5 Plus
CG43143-PF 1532 CG43143-PF 72..337 24..297 380 33.5 Plus
CG43143-PH 1551 CG43143-PH 72..337 24..297 380 33.5 Plus
CG43143-PE 2537 CG43143-PE 72..337 24..297 380 33.5 Plus
CG43143-PI 2556 CG43143-PI 72..337 24..297 380 33.5 Plus
CG17528-PD 748 CG17528-PD 477..734 22..278 371 33.8 Plus
CG17528-PC 748 CG17528-PC 477..734 22..278 371 33.8 Plus
Sik2-PA 1398 CG4290-PA 141..391 22..278 370 35.6 Plus
CaMKII-PK 482 CG18069-PK 4..325 12..340 357 29 Plus
CaMKII-PH 490 CG18069-PH 4..325 12..340 357 29 Plus
CaMKII-PC 490 CG18069-PC 4..325 12..340 357 29 Plus
CaMKII-PA 490 CG18069-PA 4..325 12..340 357 29 Plus
CaMKII-PM 504 CG18069-PM 4..325 12..340 357 29 Plus
CaMKII-PB 509 CG18069-PB 4..325 12..340 357 29 Plus
CaMKII-PE 509 CG18069-PE 4..325 12..340 357 29 Plus
CaMKII-PG 516 CG18069-PG 4..325 12..340 357 29 Plus
CaMKII-PL 522 CG18069-PL 4..325 12..340 357 29 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:19:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17268-PA 508 GI17268-PA 6..508 13..512 2412 89.1 Plus
Dmoj\GI20735-PA 1228 GI20735-PA 492..792 14..314 467 36.6 Plus
Dmoj\GI16329-PA 589 GI16329-PA 34..342 22..329 431 31.9 Plus
Dmoj\GI10063-PA 766 GI10063-PA 131..391 22..288 420 34.6 Plus
Dmoj\GI23579-PA 1495 GI23579-PA 69..336 22..297 412 34.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:19:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19651-PA 397 GL19651-PA 1..397 115..512 1907 91 Plus
Dper\GL10531-PA 1212 GL10531-PA 476..743 14..287 464 38.4 Plus
Dper\GL14247-PA 581 GL14247-PA 28..330 22..329 413 31.9 Plus
Dper\GL12610-PA 733 GL12610-PA 124..388 22..290 413 35.2 Plus
Dper\GL21140-PA 755 GL21140-PA 466..741 1..278 388 33.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:19:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26044-PA 518 GA26044-PA 23..518 16..512 2426 92.2 Plus
Dpse\GA24400-PA 1212 GA24400-PA 476..743 14..287 464 38.4 Plus
Dpse\GA15892-PA 587 GA15892-PA 28..336 22..329 434 32.2 Plus
Dpse\GA23557-PA 866 GA23557-PA 13..268 17..278 424 36.4 Plus
Dpse\GA19806-PA 735 GA19806-PA 124..388 22..290 412 35.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:19:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17194-PA 570 GM17194-PA 1..570 1..512 2659 88.8 Plus
Dsec\GM21966-PA 1192 GM21966-PA 462..729 14..287 460 38 Plus
Dsec\GM26105-PA 603 GM26105-PA 44..318 8..283 433 35.7 Plus
Dsec\GM26104-PA 705 GM26104-PA 98..358 22..288 416 34.6 Plus
Dsec\GM19132-PA 565 GM19132-PA 28..319 22..329 403 32.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24070-PA 187 GD24070-PA 1..178 1..189 913 92.1 Plus
Dsim\GD24071-PA 123 GD24071-PA 2..123 391..512 633 97.5 Plus
Dsim\GD20665-PA 603 GD20665-PA 44..318 8..283 434 35.3 Plus
Dsim\GD16554-PA 582 GD16554-PA 28..336 22..329 433 32.2 Plus
Dsim\GD12530-PA 680 GD12530-PA 119..374 17..278 422 36.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22747-PA 509 GJ22747-PA 12..509 16..512 2415 89.4 Plus
Dvir\GJ20472-PA 1208 GJ20472-PA 472..772 14..314 467 36.6 Plus
Dvir\GJ14109-PA 857 GJ14109-PA 13..268 17..278 424 36.4 Plus
Dvir\GJ23798-PA 756 GJ23798-PA 130..394 22..290 411 34.8 Plus
Dvir\GJ23554-PA 1365 GJ23554-PA 69..336 22..297 409 33.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18348-PA 523 GK18348-PA 30..523 16..512 2354 87.8 Plus
Dwil\GK20195-PA 395 GK20195-PA 1..395 115..512 1845 86 Plus
Dwil\GK15874-PA 1239 GK15874-PA 504..804 14..314 466 36.6 Plus
Dwil\GK16296-PA 592 GK16296-PA 31..339 22..329 438 32.5 Plus
Dwil\GK20597-PA 874 GK20597-PA 13..268 17..278 425 36.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:19:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12755-PA 512 GE12755-PA 1..512 1..512 2721 98.2 Plus
Dyak\GE12057-PA 1211 GE12057-PA 475..742 14..287 460 38 Plus
Dyak\GE24628-PA 600 GE24628-PA 42..409 6..375 443 32 Plus
Dyak\GE16684-PA 582 GE16684-PA 28..336 22..329 434 32.2 Plus
Dyak\GE23131-PA 861 GE23131-PA 13..268 17..278 425 36.4 Plus

LD42896.hyp Sequence

Translation from 714 to 2252

> LD42896.hyp
MAATLTEAGTGPAATREFVEGWTLAQTLGEGAYGEVKLLINRQTGEAVAM
KMVDLKKHPDAANSVRKEVCIQKMLQDKHILRFFGKRSQGSVEYIFLEYA
AGGELFDRIEPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHRDLKPENLL
LDEHDNVKISDFGMATMFRCKGKERLLDKRCGTLPYVAPEVLQKAYHAQP
ADLWSCGVILVTMLAGELPWDQPSTNCTEFTNWRDNDHWQLQTPWSKLDT
LAISLLRKLLATSPGTRLTLEKTLDHKWCNMQFADNERSYDLVDSAAALE
ICSPKAKRQRLQSSAHLSNGLDDSISRNYCSQPMPTMRSDDDFNVRLGSG
RSKEDGGDRQTLAQEARLSYSFSQPALLDDLLLATQMNQTQNASQNYFQR
LVRRMTRFFVTTRWDDTIKRLVGTIERLGGYTCKFGDDGVVTVSTVDRNK
LRLVFKAHIIEMDGKILVDCRLSKGCGLEFKRRFIKIKNALEDIVLKGPT
TWPIAIATNSVP*

LD42896.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:59:22
Subject Length Description Subject Range Query Range Score Percent Strand
grp-PA 512 CG17161-PA 1..512 1..512 2688 100 Plus
grp-PB 512 CG17161-PB 1..512 1..512 2688 100 Plus
grp-PC 512 CG17161-PC 1..512 1..512 2688 100 Plus
grp-PF 398 CG17161-PF 1..398 115..512 2105 100 Plus
grp-PD 398 CG17161-PD 1..398 115..512 2105 100 Plus