Clone LD43050 Report

Search the DGRC for LD43050

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:430
Well:50
Vector:pOT2
Associated Gene/TranscriptCG42684-RB
Protein status:LD43050.pep: gold
Preliminary Size:4902
Sequenced Size:5405

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15816 2001-01-01 Release 2 assignment
CG5898 2001-01-01 Release 2 assignment
CG5960 2001-01-01 Release 2 assignment
CG32560 2001-09-19 Blastp of sequenced clone
CG32560 2003-01-01 Sim4 clustering to Release 3
CG32560 2008-04-29 Release 5.5 accounting
CG42270 2008-08-15 Release 5.9 accounting
CG42270 2008-12-18 5.12 accounting

Clone Sequence Records

LD43050.complete Sequence

5405 bp (5405 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058706

> LD43050.complete
AATCGCCATAAGGCACAAGTGCAATAAAAACCATAACAACAACAACAACA
GCAAGAACAAACAAAATCAATATTCAAATTAAGCAGCAGCACCAACAACA
ACAACTCAACGAGCCGAGTCGATAAGCTAAACGATAAGTGCGAGAGCCAA
AAAGGGGAGAAGAGCGCTCGACAGAGAGCGCGCGAGAGAAAAGCCGAGAG
AGTGAGAACACAGCATCCACCCAAACCAAATCCACAAAATTACCACCCCC
ACAAAATGGGACGTCGAACGTATTTAAGCCGGTCCTCAACGATTTCCTAC
CCCAGCAGAATCGAAGGATGGCTGGATGTCTGCGAAACCGAGGGAGAACT
AACTCGCCTGATCAAGACGCTTCCCTGGGGTCCTTTATACTGCGTGCTGC
AACAGGACGATCAGACATTCACCGCCTACTGCAGCGAGGAGATTTCGCTA
GGCGATGTTTGCTACGAGGACATTCCAAGGGTTCGGTTGGACCGAGTTCG
TCGTCCTGCGAAGGCTTTGTGGGACGGACCGCCGACGTTGGTCGAGGAAA
ACGAGGATTCAGATTCGTGTGTTGGGGGCAGCGGCGGCATGAGTGGCATC
AACGACATCGTCCTGAATACGACGCTCTACAGTGAACTAGATACGTCCTA
TGAGAAGGCGTGCCGCCGTGGATCAGCGCCCACCACGCCCATTTTGGGCA
GCAAACAGCACCAGACGGAGCACAATGCCACCTCGCGTTTCACCAACTTC
TTTTCCAAGAAATCCAATCCTTTGAAGCGGACCAAGTCGGTGACCAAGCT
GGAGCGGACCAAGCGCGGATCCGGCGGACTGAGGGGCTCCCGCTCGCACG
AGAGTCTGCTGTCCAGTCACGCCGTCATGTCCACCATAGATCTCTCGTGC
ACTGGGGCGGTGGGCGTGGCGCCCGTGCATCAGTCGGTTCTGGGACGTCG
TCACTGTTTCCAGGTACGGGGCGGGCCTCGTGGCGAGCGGTACTACTCAT
GCGGATCGCGCCAGGAGCGCGACCTTTGGATCTACTCGCTGCGCAAGTCG
ATCGCTCCGAATGCAGAGCACACGCGTCGCACGGACAACTCGCTGAAGAT
GTGGGTGTACGAGGCGAAAAATCTGCCGCCCAAGAAGCGTTACTTTTGCG
AACTGCAATTGGACAAGACGCTGTACGGCCGGACTTCGGTGAAGCTGCAG
ACGGATCTGCTGTTTTGGGGGGAGCACTTCGATTTCCCCGACATACCCGA
GATTAATGTGATCACTGTTAACGTTTTCCGTGAGGTGGACAAGAAGAAGA
AGCGGGACAAATACCAATTTGTGGGATCGGTGAAGATACCCGTGCACGAT
GTCACCTCCAGATTGCCCTGCGAACAATGGTATCCCATACTGAGCGACAA
GGCGGGCGACAGTCTGGGCAGGACATCGGGCGGCGGCGGCAGTGGGTCCA
AGGACAAGGAGCAATTGCCCACGCTGAGGATCAAGTGTCGTTTCCAGAGC
ACCGACATCCTGCCCATCAATGTGTACGGCAACTTTTTGACGTACCTCAA
GGAGAACTATAAGCGCGTGTGCGAGACCCTGGAGCCGGTGATCGGAGTCA
AGGCCAAGGAGGACATTGGACAGGCACTGGTGCTGCTGATGCACGCACAG
GGATTGGCGGGCGCCTTCCTCACCGATGTGGTGGCCCTCGATCTGCTGCG
AGTTGGCGATCAGAGGCTTACGTTCAGGGGCAACTCCTTGGCCACCAAGA
GCATGGAGGCATTCCTCAAGCTGACGGGCGAACAGTATCTGCAGGACACA
CTATCCGCACCAATAAACGAGCTAATTCAGTCGGAGAGGGACTGCGAGGT
GGATCCCACCAAGACGAGCGGTTCGTCGGCGGGTTCGCTGCAGCGACAGC
AGGCCGCCTTGCGTGGCGCGGTCCGAGGGGCGTGGCAGTGCATCTTCGAA
TCGCACAAGCATTTTCCCGCCCAGTTACGAAATTGCTTTGCGACGTTCCG
GGAGCGCTTGCAGCAGCTGGGCCGTCAGGATATGGCCGACAACCTGATCT
CGGCGAGCATTTTCCTGCGCTTCCTGTGCCCGGCCATCCTGTCGCCGTCG
CTCTTCAATATCACCAGCGAACTGCCGTCCGCACGGGCCACCCGCAATCT
CACACTGGTGGCCAAGACCCTGCAAACATTGGCCAATTTCACCCGCTTCC
AGGGCAAAGAGAACTTTATGGAGTTTCTCAACGATTTCCTCGAGCAGGAG
GCCGCTCGCATGCAACAGTTTCTGGAGATTATATCCACGCGGCCGGAGCA
CCCAGCTCCAGACTCGATCCTCGATTGGGCCGGGTACATCGACCAGGGCA
AACAGTTGTCCATACTACACAGTTTGCTCAGCGAAAGCCTGGCCAAGCTG
CCGGAGGCCAGGCAGCACGAGCTGGATCCGTTGCAGCATATTCTCGATGA
AATCAGCCGAGCCAAAGAGCATGGCATGGGCACAGCACTGCCGGGTGGAT
ATTTGCCGGCCACCTCGTCTACGCACTCGATAGCCAGCGAGAATCAGGAG
AATCGCAATCCGGGATCCTCGGGCTCGCACGCTGGCTCCAACTCGGAGCA
GTTACTGCCACAACAAAGCCAGTTGGCCCAGCCGCAGCATGCGATTGTTA
GTAAACCATTATCTGCGGAGCGCGGCATCATGCGAGGAGTACTTACGCCG
AATTCTCTGGAGAAGAATATCTTTAGATACAATGATCCCACGGTTAATGG
CTTACTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAAC
AGCAACATCAGCAGCTGCAACAGCATGGCCATCAGCAACAGCCGCACCAC
CAGCATCCACTCCAGATGCTCTCCAATTCACAAACCTCCATTGCCGGCAA
CCAATATATGAGTTCGCCAGGAGGCCTGCAGCATGCCCAATCGCAGACCT
CGATGGCGTCCTCATCGCTTAATGGGAGCAGCAGCAATTTGCTGCACGGC
CACCAGCAGCATGCCCATCACCCGCAGCAACTGCATCCACATCACTGCCC
GCCGGCGCCACAGACCAGTGCCTCCAGCACTATGGAGCGCATGGATCGCA
TGAACTATCCGTATATGTCGCACAATGGCAATGACTACGAGACCAGCACG
CCTTCGAGCACTCGCTCCAGGACACTGCCACGGAATGGAAATCCCAATGC
CAATGGCAACGTGGGCAGCAGCAACAATAACCAGAGCGGCAGCTACGATG
ACATGCACGGGGAGTTCCAAATCCAGATCTCTGGGTTCGATACGAGCAGT
GCTTTTGTCTGCAAGTCGCCCACACCCATGATGAAATCCAGTTTGGGACC
AGCGGGGGCCGGACGAAGTCATCACAAACTGAATTTGGGAATACCCGATC
ACTCAGGTGGCTATGTGCGGGGTAATAATTTGAATCCCAACTCGAATATG
CCCAAGAACTTGGAGGATCTGGACGATCTGTTCAAGTACGCCGAGGAGCA
TGACGTGGCGGAACCAGCGAACCATCACAATCACAACCAGGGTCAGCAGA
ACCACCAGGGACATCTGAAGCCGGCCGCCGTTCCCGGCAAGGAGCAGCTG
TCGGCGAAAAGCAGTCACTGCAGTTCTGGCTACCAGAGCATCTCCACAAA
TCCCTCGCCCTCGCAGTCCTCCAGTCCCGTGGAGAGCCAGCTGAAGGCCG
CGATGGGCAGTCACAATGCGCCGCTGGCCTTCAAGAATCCCTCCTATCAG
CTTCAGCCCCAAACTGGCTCGTCCAGATCATCGGCACAGAGTAATACACA
CCAGCAGCAGCAGCAGCAGCAACAACAACAGTTTGGCAGCCGCTTGAAAC
CAATTGGCGGCGGACTGGTGGCCGCGAGGGCGGCTTTCCTCAACAGTGGC
GGAGCCTTGGAGGCGGCCACTTTGACGCCCAGCTCCTCGGACGAACAGCT
CTCGGCGGATAATTACTTCAGTTATGCAGCGGCTGCAGCTGCTGGAGCGG
GTATTGCCACCAAATTGGAGGCTCAACGCTCGCTCAGCGGCGGCAGTAGC
TCCTCCACCTCAGCATCTGCGTCCACCTCGAATCTTGGCAAGAGCGGCGG
CTCATCCGCCTACGGGCGGCTGAATGGGCCGCTGAAGCGCGAGGATGTCT
ACGGCAGTGGCTACGGCGGCAGCAGTGGAAATGTGGGCTATGGCTTGTCC
ACTTCCAGTGCCGCGGGACACCATCAACATCCCCACCAGCAGCAGCAGAA
TCCGATGCAGCAGCAGCAGCAAAGGGAACGGGATCAGGAACACAAGCAGT
ATGCCGGCAGTGTGGCGGGCAGCGTGGGATCGGCCACATCAGCGGCTCAG
AGGCGCCTGAGCTTGGACTCGGCGCGCACGCTCTCCGACAGCAGCACGGA
TACAGAGGGACACTGCAACCAATTGCAGGAGGGCAAGCGACGCAGGCAGT
TGCGCAGCAGTGGCGGCAGCGGCGGAGGAGGAGCCGGTTCTGAGCAGGGA
CTGGGCAAGAGCTATGACCAGAACGGAGAGATTCAGCTGCTGCAACAGAC
GCTGGACACGCTCTGCCACACGCTGGACCGGGATGAGGCCGAGCTTCGCG
ACTCCAGCGACGAGCTGTTTGGCCTGCAGCGTCCGGCGGGCAGCAATGGA
TCGAACAATCTTAGCCTGCAGTCGGAGTCCACTATGCGCAGCATCATCGA
CAGACTCATAACCATGGAGGAGGAGCTGCGACGCGAGCAGCTGAAGATGT
CGCTGGCGCTGTCGCACAAGCAGCGCGTGATCGAGGAGCAGGGCCAGCAG
ATTGCGGCACTGGATGCGGCCAACAGCCGGCTGCTGAGTGCCCTGACCGC
CCTGCGCCAGCGGTACGAGACCCAGCAGCAGCAGCAGCAGCACCAAGCAC
CACCAAAGACCCAGAAGCCGCAGTGAGCGGATGGGGGGCAGAGAGGAAGG
GCAGAGATGGAAGGAGACTAAGGAGGATTAGGAGGTGACCGCGACCGAAC
CCGAAACCGAAACCGATACCTAGCATACCTAGCATACTGACGGTGGCATC
TTTGTTGCGCTGGACACCGTCGCGGTCCCGTCTTAGAGATACCTTTTTGT
TTATTTTTTTTTTTAGATATTTTTTTTGTATGCTACATAAATTATAATAT
ATATACTACATGTTTAATATATAACTATGCATAACATACATACATACATT
ATACATAATTTCTCAATCTATGTTTAAAACCAACAAATTGTGAAAACGCT
AAACGCAGCTGCAAAGGCAGCAAGATAAACCCCAGAAGATCGGAGCATGG
AAGTGAAGAAGAACCAGAACAAGTTAAGATAATGAATAAAATTATAACCA
AAGTTAGACAAAAAAAAAAAAAAAAAAAAAAACCATTAAAAAAAAAAAAA
AAAAA

LD43050.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:47:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG42270-RB 5950 CG42270-RB 414..5777 1..5364 26820 100 Plus
CG42270.a 6183 CG42270.a 647..6010 1..5364 26820 100 Plus
CG42270-RC 5477 CG42270-RC 747..5472 639..5364 23630 100 Plus
CG42270-RC 5477 CG42270-RC 37..676 1..640 3200 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:04:32
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 17636328..17639850 887..4409 17570 99.9 Plus
chrX 22417052 chrX 17640390..17641053 4701..5364 3320 100 Plus
chrX 22417052 chrX 17600129..17600462 1..334 1670 100 Plus
chrX 22417052 chrX 17639916..17640211 4408..4703 1480 100 Plus
chrX 22417052 chrX 17610782..17610975 447..640 970 100 Plus
chrX 22417052 chrX 17636132..17636259 762..889 625 99.2 Plus
chrX 22417052 chrX 17635939..17636061 639..761 615 100 Plus
chrX 22417052 chrX 17609946..17610059 334..447 570 100 Plus
chrX 22417052 chrX 9646725..9646823 2757..2855 225 81.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:38:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:04:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17746965..17750487 887..4409 17615 100 Plus
X 23542271 X 17751027..17751690 4701..5364 3320 100 Plus
X 23542271 X 17710786..17711119 1..334 1670 100 Plus
X 23542271 X 17750553..17750848 4408..4703 1480 100 Plus
X 23542271 X 17721422..17721615 447..640 970 100 Plus
X 23542271 X 17746771..17746898 762..889 640 100 Plus
X 23542271 X 17746569..17746691 639..761 615 100 Plus
X 23542271 X 17720586..17720699 334..447 570 100 Plus
X 23542271 X 9755014..9755112 2757..2855 225 81.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:07:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 17755063..17758585 887..4409 17615 100 Plus
X 23527363 X 17759125..17759788 4701..5364 3320 100 Plus
X 23527363 X 17718884..17719217 1..334 1670 100 Plus
X 23527363 X 17758651..17758946 4408..4703 1480 100 Plus
X 23527363 X 17729520..17729713 447..640 970 100 Plus
X 23527363 X 17754869..17754996 762..889 640 100 Plus
X 23527363 X 17754667..17754789 639..761 615 100 Plus
X 23527363 X 17728684..17728797 334..447 570 100 Plus
X 23527363 X 9763115..9763210 2757..2855 230 83.8 Plus
Blast to na_te.dros performed 2019-03-16 11:04:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2431 2758..2855 301 78.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6691..6767 3174..3246 132 67.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2378..2453 3182..3254 130 65.8 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 702..814 14..126 123 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6743..6788 3201..3246 122 73.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6764..6809 3201..3246 122 73.9 Plus

LD43050.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:05:11 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 17600129..17600462 1..334 100 -> Plus
chrX 17609947..17610059 335..447 100 -> Plus
chrX 17610783..17610975 448..640 100 -> Plus
chrX 17635941..17636061 641..761 100 -> Plus
chrX 17636132..17636259 762..889 99 -> Plus
chrX 17636331..17639849 890..4408 99 -> Plus
chrX 17639917..17640211 4409..4703 100 -> Plus
chrX 17640393..17641048 4704..5359 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:49:54 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
CG42270-RB 1..4671 256..4926 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:42:22 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
CG42684-RB 1..4671 256..4926 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:50:15 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
CG42684-RB 1..4671 256..4926 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:20:49 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
CG42270-RB 1..4671 256..4926 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:25:28 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
CG42684-RB 1..4671 256..4926 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:49:54 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
CG42270-RB 1..5359 1..5359 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:42:22 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
CG42684-RB 1..5359 1..5359 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:50:15 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
CG42684-RB 643..6001 1..5359 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:20:50 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
CG42270-RB 1..5359 1..5359 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:25:28 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
CG42684-RB 643..6001 1..5359 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:05:11 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
X 17710786..17711119 1..334 100 -> Plus
X 17720587..17720699 335..447 100 -> Plus
X 17721423..17721615 448..640 100 -> Plus
X 17746571..17746691 641..761 100 -> Plus
X 17746771..17746898 762..889 100 -> Plus
X 17746968..17750486 890..4408 100 -> Plus
X 17750554..17750848 4409..4703 100 -> Plus
X 17751030..17751685 4704..5359 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:05:11 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
X 17710786..17711119 1..334 100 -> Plus
X 17720587..17720699 335..447 100 -> Plus
X 17721423..17721615 448..640 100 -> Plus
X 17746571..17746691 641..761 100 -> Plus
X 17746771..17746898 762..889 100 -> Plus
X 17746968..17750486 890..4408 100 -> Plus
X 17750554..17750848 4409..4703 100 -> Plus
X 17751030..17751685 4704..5359 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:05:11 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
X 17710786..17711119 1..334 100 -> Plus
X 17720587..17720699 335..447 100 -> Plus
X 17721423..17721615 448..640 100 -> Plus
X 17746571..17746691 641..761 100 -> Plus
X 17746771..17746898 762..889 100 -> Plus
X 17746968..17750486 890..4408 100 -> Plus
X 17750554..17750848 4409..4703 100 -> Plus
X 17751030..17751685 4704..5359 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:50:15 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17604819..17605152 1..334 100 -> Plus
arm_X 17614620..17614732 335..447 100 -> Plus
arm_X 17615456..17615648 448..640 100 -> Plus
arm_X 17640604..17640724 641..761 100 -> Plus
arm_X 17640804..17640931 762..889 100 -> Plus
arm_X 17641001..17644519 890..4408 100 -> Plus
arm_X 17644587..17644881 4409..4703 100 -> Plus
arm_X 17645063..17645718 4704..5359 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:55:51 Download gff for LD43050.complete
Subject Subject Range Query Range Percent Splice Strand
X 17729521..17729713 448..640 100 -> Plus
X 17754669..17754789 641..761 100 -> Plus
X 17754869..17754996 762..889 100 -> Plus
X 17758652..17758946 4409..4703 100 -> Plus
X 17718884..17719217 1..334 100 -> Plus
X 17728685..17728797 335..447 100 -> Plus
X 17755066..17758584 890..4408 100 -> Plus
X 17759128..17759783 4704..5359 100   Plus

LD43050.pep Sequence

Translation from 255 to 4925

> LD43050.pep
MGRRTYLSRSSTISYPSRIEGWLDVCETEGELTRLIKTLPWGPLYCVLQQ
DDQTFTAYCSEEISLGDVCYEDIPRVRLDRVRRPAKALWDGPPTLVEENE
DSDSCVGGSGGMSGINDIVLNTTLYSELDTSYEKACRRGSAPTTPILGSK
QHQTEHNATSRFTNFFSKKSNPLKRTKSVTKLERTKRGSGGLRGSRSHES
LLSSHAVMSTIDLSCTGAVGVAPVHQSVLGRRHCFQVRGGPRGERYYSCG
SRQERDLWIYSLRKSIAPNAEHTRRTDNSLKMWVYEAKNLPPKKRYFCEL
QLDKTLYGRTSVKLQTDLLFWGEHFDFPDIPEINVITVNVFREVDKKKKR
DKYQFVGSVKIPVHDVTSRLPCEQWYPILSDKAGDSLGRTSGGGGSGSKD
KEQLPTLRIKCRFQSTDILPINVYGNFLTYLKENYKRVCETLEPVIGVKA
KEDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGDQRLTFRGNSLATKSM
EAFLKLTGEQYLQDTLSAPINELIQSERDCEVDPTKTSGSSAGSLQRQQA
ALRGAVRGAWQCIFESHKHFPAQLRNCFATFRERLQQLGRQDMADNLISA
SIFLRFLCPAILSPSLFNITSELPSARATRNLTLVAKTLQTLANFTRFQG
KENFMEFLNDFLEQEAARMQQFLEIISTRPEHPAPDSILDWAGYIDQGKQ
LSILHSLLSESLAKLPEARQHELDPLQHILDEISRAKEHGMGTALPGGYL
PATSSTHSIASENQENRNPGSSGSHAGSNSEQLLPQQSQLAQPQHAIVSK
PLSAERGIMRGVLTPNSLEKNIFRYNDPTVNGLLQQQQQQQQQQQQQQQQ
HQQLQQHGHQQQPHHQHPLQMLSNSQTSIAGNQYMSSPGGLQHAQSQTSM
ASSSLNGSSSNLLHGHQQHAHHPQQLHPHHCPPAPQTSASSTMERMDRMN
YPYMSHNGNDYETSTPSSTRSRTLPRNGNPNANGNVGSSNNNQSGSYDDM
HGEFQIQISGFDTSSAFVCKSPTPMMKSSLGPAGAGRSHHKLNLGIPDHS
GGYVRGNNLNPNSNMPKNLEDLDDLFKYAEEHDVAEPANHHNHNQGQQNH
QGHLKPAAVPGKEQLSAKSSHCSSGYQSISTNPSPSQSSSPVESQLKAAM
GSHNAPLAFKNPSYQLQPQTGSSRSSAQSNTHQQQQQQQQQQFGSRLKPI
GGGLVAARAAFLNSGGALEAATLTPSSSDEQLSADNYFSYAAAAAAGAGI
ATKLEAQRSLSGGSSSSTSASASTSNLGKSGGSSAYGRLNGPLKREDVYG
SGYGGSSGNVGYGLSTSSAAGHHQHPHQQQQNPMQQQQQRERDQEHKQYA
GSVAGSVGSATSAAQRRLSLDSARTLSDSSTDTEGHCNQLQEGKRRRQLR
SSGGSGGGGAGSEQGLGKSYDQNGEIQLLQQTLDTLCHTLDRDEAELRDS
SDELFGLQRPAGSNGSNNLSLQSESTMRSIIDRLITMEEELRREQLKMSL
ALSHKQRVIEEQGQQIAALDAANSRLLSALTALRQRYETQQQQQQHQAPP
KTQKPQ*

LD43050.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:20:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19468-PA 1596 GF19468-PA 1..1572 1..1538 6145 84.4 Plus
Dana\GF20186-PA 965 GF20186-PA 426..900 211..703 325 27 Plus
Dana\GF24683-PA 1164 GF24683-PA 400..749 355..684 317 27.5 Plus
Dana\GF16794-PA 2801 GF16794-PA 1266..1507 438..677 224 30.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:20:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19129-PA 1571 GG19129-PA 1..1571 1..1556 8113 97 Plus
Dere\GG19350-PA 954 GG19350-PA 428..882 211..678 344 27 Plus
Dere\GG14000-PA 1158 GG14000-PA 456..742 406..682 311 29.9 Plus
Dere\GG11448-PA 2802 GG11448-PA 1267..1508 438..677 224 30.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:20:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12821-PA 1608 GH12821-PA 1..823 1..831 4023 90 Plus
Dgri\GH17640-PA 954 GH17640-PA 428..925 211..717 359 26.7 Plus
Dgri\GH16534-PA 1016 GH16534-PA 447..730 406..678 297 29.7 Plus
Dgri\GH11772-PA 857 GH11772-PA 462..745 406..678 295 29.6 Plus
Dgri\GH19449-PA 2802 GH19449-PA 1266..1507 438..677 222 30.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG42684-PB 1556 CG42270-PB 1..1556 1..1556 8089 100 Plus
CG42684-PH 1563 CG42684-PH 1..1563 1..1556 8071 99.6 Plus
CG42684-PG 1565 CG42684-PG 1..1565 1..1556 8069 99.4 Plus
CG42684-PC 1580 CG42270-PC 1..1580 1..1556 8054 98.5 Plus
CG42684-PE 1589 CG42684-PE 1..1589 1..1556 8034 97.9 Plus
CG42684-PD 1583 CG42270-PD 145..1583 117..1556 7414 99.5 Plus
CG42684-PA 2009 CG15816-PA 582..2009 129..1556 7404 100 Plus
CG42684-PF 1590 CG42684-PF 145..1590 117..1556 7396 99 Plus
CG42684-PI 2016 CG42684-PI 582..2016 129..1556 7386 99.5 Plus
vap-PF 954 CG9209-PF 428..925 211..717 355 25.3 Plus
vap-PE 954 CG9209-PE 428..925 211..717 355 25.3 Plus
vap-PC 954 CG9209-PC 428..925 211..717 355 25.3 Plus
vap-PB 954 CG9209-PB 428..925 211..717 355 25.3 Plus
vap-PA 954 CG9209-PA 428..925 211..717 355 25.3 Plus
vap-PD 954 CG9209-PD 428..925 211..717 355 25.3 Plus
RasGAP1-PB 1163 CG6721-PB 456..742 406..682 297 29.9 Plus
RasGAP1-PA 1163 CG6721-PA 456..742 406..682 297 29.9 Plus
RasGAP1-PC 1181 CG6721-PC 456..742 406..682 297 29.9 Plus
Nf1-PF 2734 CG8318-PF 1267..1508 438..677 220 29.7 Plus
Nf1-PC 2746 CG8318-PC 1267..1508 438..677 220 29.7 Plus
Nf1-PD 2764 CG8318-PD 1267..1508 438..677 220 29.7 Plus
Nf1-PE 2793 CG8318-PE 1267..1508 438..677 220 29.7 Plus
Nf1-PB 2802 CG8318-PB 1267..1508 438..677 220 29.7 Plus
Mur89F-PC 2158 CG4090-PC 282..827 876..1419 200 21.9 Plus
Mur89F-PB 2159 CG4090-PB 282..827 876..1419 200 21.9 Plus
CG42389-PF 1762 CG31738-PB 73..616 833..1382 192 25.4 Plus
rg-PQ 3785 CG44835-PQ 2151..2684 831..1330 190 22.7 Plus
pros-PH 1674 CG17228-PH 22..662 822..1446 189 20.5 Plus
pros-PM 1703 CG17228-PM 22..662 822..1446 189 20.5 Plus
pros-PI 1835 CG17228-PI 22..662 822..1446 189 20.5 Plus
rg-PL 3719 CG44835-PL 2141..2568 831..1195 187 24.7 Plus
Smr-PG 3607 CG4013-PG 15..538 952..1549 186 20.1 Plus
kis-PF 5191 CG3696-PF 657..889 771..1009 178 29.8 Plus
kis-PE 5252 CG3696-PE 657..889 771..1009 178 29.8 Plus
kis-PA 5322 CG3696-PA 657..889 771..1009 178 29.8 Plus
kis-PD 5343 CG3696-PD 657..889 771..1009 178 29.8 Plus
kis-PC 5517 CG3696-PC 657..889 771..1009 178 29.8 Plus
ena-PE 684 CG15112-PE 153..345 747..936 176 30.8 Plus
ena-PC 684 CG15112-PC 153..345 747..936 176 30.8 Plus
ena-PA 684 CG15112-PA 153..345 747..936 176 30.8 Plus
ena-PF 980 CG15112-PF 449..641 747..936 176 30.8 Plus
N-PB 2703 CG3936-PB 2499..2703 793..1008 176 31.1 Plus
N-PA 2703 CG3936-PA 2499..2703 793..1008 176 31.1 Plus
dl-PB 677 CG6667-PB 464..647 825..1013 170 29.2 Plus
dl-PA 677 CG6667-PA 464..647 825..1013 170 29.2 Plus
dl-PE 677 CG6667-PE 464..647 825..1013 170 29.2 Plus
dl-PD 677 CG6667-PD 464..647 825..1013 170 29.2 Plus
Smr-PF 3601 CG4013-PF 15..532 952..1549 170 20.5 Plus
Smr-PE 3601 CG4013-PE 15..532 952..1549 170 20.5 Plus
Smr-PD 3601 CG4013-PD 15..532 952..1549 170 20.5 Plus
ena-PB 834 CG15112-PB 298..494 747..936 165 30.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:21:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15924-PA 1584 GI15924-PA 1..1571 1..1539 5422 75.1 Plus
Dmoj\GI16079-PA 954 GI16079-PA 428..930 211..730 355 26.9 Plus
Dmoj\GI13821-PA 770 GI13821-PA 460..743 406..678 302 30 Plus
Dmoj\GI24684-PA 2800 GI24684-PA 1264..1505 438..677 224 30.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:21:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14748-PA 362 GL14748-PA 1..341 1..343 1784 93.6 Plus
Dper\GL15969-PA 903 GL15969-PA 377..874 211..717 351 26.4 Plus
Dper\GL15068-PA 1183 GL15068-PA 471..754 406..678 306 29.6 Plus
Dper\GL21812-PA 2804 GL21812-PA 1268..1509 438..677 221 30.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16990-PA 1605 GA16990-PA 1..1605 1..1556 5760 79.9 Plus
Dpse\GA19811-PA 1182 GA19811-PA 471..754 406..678 305 29.6 Plus
Dpse\GA26413-PB 2768 GA26413-PB 1270..1511 438..677 220 30.1 Plus
Dpse\GA26413-PC 2738 GA26413-PC 1270..1511 438..677 219 30.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:21:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13523-PA 1556 GM13523-PA 1..1556 1..1556 8208 98.8 Plus
Dsec\GM11672-PA 933 GM11672-PA 407..861 211..678 343 27 Plus
Dsec\GM24835-PA 1159 GM24835-PA 456..742 406..682 313 29.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:21:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17363-PA 1420 GD17363-PA 9..1420 130..1556 7218 96 Plus
Dsim\GD15679-PA 130 GD15679-PA 1..128 1..128 695 98.4 Plus
Dsim\GD12887-PA 1159 GD12887-PA 456..742 406..682 307 29.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:21:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16831-PA 1571 GJ16831-PA 1..1571 1..1556 5488 76.7 Plus
Dvir\GJ15727-PA 954 GJ15727-PA 428..925 211..717 356 26.5 Plus
Dvir\GJ11688-PA 1166 GJ11688-PA 415..698 406..678 304 30 Plus
Dvir\GJ23901-PA 2623 GJ23901-PA 1266..1507 438..677 227 30.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:21:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25320-PA 1566 GK25320-PA 1..1566 1..1556 5515 77.7 Plus
Dwil\GK20115-PA 956 GK20115-PA 430..932 211..730 350 26.1 Plus
Dwil\GK12674-PA 1305 GK12674-PA 472..815 355..678 322 28.8 Plus
Dwil\GK12879-PA 2806 GK12879-PA 1267..1508 438..677 225 30.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:21:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17682-PA 1447 GE17682-PA 11..1447 129..1556 7473 98.1 Plus
Dyak\GE17678-PA 157 GE17678-PA 1..129 1..129 696 96.1 Plus
Dyak\GE15997-PA 954 GE15997-PA 428..882 211..678 344 27 Plus
Dyak\GE20296-PA 1167 GE20296-PA 456..742 406..682 312 29.9 Plus
Dyak\GE23642-PA 2802 GE23642-PA 1267..1508 438..677 224 30.1 Plus

LD43050.hyp Sequence

Translation from 255 to 4925

> LD43050.hyp
MGRRTYLSRSSTISYPSRIEGWLDVCETEGELTRLIKTLPWGPLYCVLQQ
DDQTFTAYCSEEISLGDVCYEDIPRVRLDRVRRPAKALWDGPPTLVEENE
DSDSCVGGSGGMSGINDIVLNTTLYSELDTSYEKACRRGSAPTTPILGSK
QHQTEHNATSRFTNFFSKKSNPLKRTKSVTKLERTKRGSGGLRGSRSHES
LLSSHAVMSTIDLSCTGAVGVAPVHQSVLGRRHCFQVRGGPRGERYYSCG
SRQERDLWIYSLRKSIAPNAEHTRRTDNSLKMWVYEAKNLPPKKRYFCEL
QLDKTLYGRTSVKLQTDLLFWGEHFDFPDIPEINVITVNVFREVDKKKKR
DKYQFVGSVKIPVHDVTSRLPCEQWYPILSDKAGDSLGRTSGGGGSGSKD
KEQLPTLRIKCRFQSTDILPINVYGNFLTYLKENYKRVCETLEPVIGVKA
KEDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGDQRLTFRGNSLATKSM
EAFLKLTGEQYLQDTLSAPINELIQSERDCEVDPTKTSGSSAGSLQRQQA
ALRGAVRGAWQCIFESHKHFPAQLRNCFATFRERLQQLGRQDMADNLISA
SIFLRFLCPAILSPSLFNITSELPSARATRNLTLVAKTLQTLANFTRFQG
KENFMEFLNDFLEQEAARMQQFLEIISTRPEHPAPDSILDWAGYIDQGKQ
LSILHSLLSESLAKLPEARQHELDPLQHILDEISRAKEHGMGTALPGGYL
PATSSTHSIASENQENRNPGSSGSHAGSNSEQLLPQQSQLAQPQHAIVSK
PLSAERGIMRGVLTPNSLEKNIFRYNDPTVNGLLQQQQQQQQQQQQQQQQ
HQQLQQHGHQQQPHHQHPLQMLSNSQTSIAGNQYMSSPGGLQHAQSQTSM
ASSSLNGSSSNLLHGHQQHAHHPQQLHPHHCPPAPQTSASSTMERMDRMN
YPYMSHNGNDYETSTPSSTRSRTLPRNGNPNANGNVGSSNNNQSGSYDDM
HGEFQIQISGFDTSSAFVCKSPTPMMKSSLGPAGAGRSHHKLNLGIPDHS
GGYVRGNNLNPNSNMPKNLEDLDDLFKYAEEHDVAEPANHHNHNQGQQNH
QGHLKPAAVPGKEQLSAKSSHCSSGYQSISTNPSPSQSSSPVESQLKAAM
GSHNAPLAFKNPSYQLQPQTGSSRSSAQSNTHQQQQQQQQQQFGSRLKPI
GGGLVAARAAFLNSGGALEAATLTPSSSDEQLSADNYFSYAAAAAAGAGI
ATKLEAQRSLSGGSSSSTSASASTSNLGKSGGSSAYGRLNGPLKREDVYG
SGYGGSSGNVGYGLSTSSAAGHHQHPHQQQQNPMQQQQQRERDQEHKQYA
GSVAGSVGSATSAAQRRLSLDSARTLSDSSTDTEGHCNQLQEGKRRRQLR
SSGGSGGGGAGSEQGLGKSYDQNGEIQLLQQTLDTLCHTLDRDEAELRDS
SDELFGLQRPAGSNGSNNLSLQSESTMRSIIDRLITMEEELRREQLKMSL
ALSHKQRVIEEQGQQIAALDAANSRLLSALTALRQRYETQQQQQQHQAPP
KTQKPQ*

LD43050.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:00:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG42684-PB 1556 CG42270-PB 1..1556 1..1556 8089 100 Plus
CG42684-PH 1563 CG42684-PH 1..1563 1..1556 8071 99.6 Plus
CG42684-PG 1565 CG42684-PG 1..1565 1..1556 8069 99.4 Plus
CG42684-PC 1580 CG42270-PC 1..1580 1..1556 8054 98.5 Plus
CG42684-PE 1589 CG42684-PE 1..1589 1..1556 8034 97.9 Plus