BDGP Sequence Production Resources |
Search the DGRC for LD43096
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 430 |
Well: | 96 |
Vector: | pOT2 |
Associated Gene/Transcript | CG32428-RA |
Protein status: | LD43096.pep: gold |
Preliminary Size: | 2788 |
Sequenced Size: | 1196 |
Gene | Date | Evidence |
---|---|---|
CG5145 | 2001-01-01 | Release 2 assignment |
CG13249 | 2001-01-01 | Release 2 assignment |
CG32428 | 2001-09-19 | Blastp of sequenced clone |
CG32428 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32428 | 2008-04-29 | Release 5.5 accounting |
CG32428 | 2008-08-15 | Release 5.9 accounting |
CG32428 | 2008-12-18 | 5.12 accounting |
1196 bp (1196 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060430
> LD43096.complete TGAATCGAAAGGCGCACGCGGCAAAATGTAAAACTTGCTTATTGGTTTAT TTTTAACAGTTGCCGTCACCGCATTTACAGTCGCATTTCGGCCGAATGCT CGCGCGCCCCGCTTGCGTGTGTTAATTGAATTATTTCATCCATTTTAGCA ACTGCTGCGTATTTTCGGCGCTTATTAAGCCGACAGAGCCATCAAAATCC ATACTGCATACAAATACGATTTCAATTAGGGGAAAAATACGCGCCTGCAG TTCGCCGCACGATTTCGTACAGTACAGTACGGACGCAGAGGAGCGTTTTT TCCGAATTTACTGTACTTGCTTTTCGGTTTTTTTGGGGAAATTCCACTGC AGCTGGCGCGCGATGGTTTTGACGAACTTCGAGTGCTGGGCACATGGTGA TCCGTCGTCGTCGGCGGCCGCCACTTTCGAAACTGGAGCGCTGCGTCCTT CGATGGATCCGTTCAATCCACGCGCCGTCACCTTCATGACCGACGCCAAC AACAACAACAACAACAATGATGGCAATAACCTCGCGGCACAACCGATGCC GGTCGTCCTGCCTCCGGAAGTCCTGCGCTGCAAGAAGCGCCTGAATCCCG GTCACAATCCTGTCGGGGATTTGGACACGGACCAACCGGTGTACACCAAG AGATGTCGCTACGACGAGTCTGACTTGGCCGCCCAGTACTGCAATGATTT CTTTTCCTTGCCTGCCACACAAATAATTGGAACGCAGGCCTCTTTGATGG ATTACGAGATGCAGGCCACCGGCGGCATGATGATGATGGAATCGGAGACG AGTTTTCCAGCGCAGCAGCAGCAACATCAAGAGCAACAGCAACATCCACA GCAGCCACATCAATATCAGCGCATTCATCAGCATTATCAAGGTCATTTGC ATCGCGCCAACCGTGATGTGAGTCGTTGCATGATGTCGCACATGATTTAG GGGCCCTCGTTCACACAAAACTCAAAATGTACATATATAACCCAAAACAT GTACTGTAGCTGAGAAAAGCGCACAAGAAACACATGCAACAGTTCACCGA GCGACGCGTCTCTCTTTATTTGCTAAACAGCCGACAATGTATCGAAAAAT GTTCGCATATCACTCAGAAAGCAAATTAACGCAAAGGAGCAATTGAATTG AAAATATCCGCAATGCACATACCCACCGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32428.b | 1912 | CG32428.b | 160..1336 | 1..1177 | 5870 | 99.9 | Plus |
CG32428-RA | 1362 | CG32428-RA | 160..1336 | 1..1177 | 5870 | 99.9 | Plus |
CG32428-RB | 1137 | CG32428-RB | 104..1137 | 144..1177 | 5155 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20459678..20459985 | 871..1178 | 99 | == | Minus |
chr3L | 20460049..20460159 | 697..807 | 100 | <- | Minus |
chr3L | 20461653..20462348 | 1..696 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32428-RB | 1..588 | 363..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32428-RB | 1..588 | 363..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32428-RA | 1..588 | 363..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32428-RA | 1..588 | 363..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32428-RA | 1..588 | 363..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32428-RA | 13..1189 | 1..1177 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32428-RA | 13..1189 | 1..1177 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32428-RA | 37..1213 | 1..1177 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32428-RA | 13..1189 | 1..1178 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32428-RA | 37..1213 | 1..1177 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20470667..20471148 | 697..1178 | 99 | <- | Minus |
3L | 20472641..20473336 | 1..696 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20470667..20471148 | 697..1178 | 99 | <- | Minus |
3L | 20472641..20473336 | 1..696 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20470667..20471148 | 697..1178 | 99 | <- | Minus |
3L | 20472641..20473336 | 1..696 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20463767..20464248 | 697..1178 | 99 | <- | Minus |
arm_3L | 20465741..20466436 | 1..696 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20463767..20464248 | 697..1178 | 99 | <- | Minus |
3L | 20465741..20466436 | 1..696 | 100 | Minus |
Translation from 362 to 949
> LD43096.pep MVLTNFECWAHGDPSSSAAATFETGALRPSMDPFNPRAVTFMTDANNNNN NNDGNNLAAQPMPVVLPPEVLRCKKRLNPGHNPVGDLDTDQPVYTKRCRY DESDLAAQYCNDFFSLPATQIIGTQASLMDYEMQATGGMMMMESETSFPA QQQQHQEQQQHPQQPHQYQRIHQHYQGHLHRANRDVSRCMMSHMI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24128-PA | 189 | GF24128-PA | 1..189 | 1..195 | 551 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13306-PA | 188 | GG13306-PA | 1..188 | 1..195 | 750 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17014-PA | 224 | GH17014-PA | 1..224 | 1..195 | 373 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32428-PB | 195 | CG32428-PB | 1..195 | 1..195 | 1066 | 100 | Plus |
CG32428-PA | 195 | CG32428-PA | 1..195 | 1..195 | 1066 | 100 | Plus |
CG32428-PC | 238 | CG32428-PC | 1..176 | 1..176 | 961 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11908-PA | 226 | GI11908-PA | 1..226 | 1..195 | 372 | 44.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12773-PA | 188 | GL12773-PA | 1..188 | 1..195 | 495 | 55.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16894-PA | 187 | GA16894-PA | 1..187 | 1..195 | 479 | 54.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22210-PA | 195 | GM22210-PA | 1..195 | 1..195 | 1008 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12182-PA | 193 | GD12182-PA | 1..193 | 1..195 | 995 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13782-PA | 214 | GJ13782-PA | 1..214 | 1..195 | 352 | 45.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12339-PA | 204 | GK12339-PA | 1..204 | 1..195 | 361 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22396-PA | 185 | GE22396-PA | 1..185 | 1..195 | 777 | 85.6 | Plus |
Translation from 362 to 949
> LD43096.hyp MVLTNFECWAHGDPSSSAAATFETGALRPSMDPFNPRAVTFMTDANNNNN NNDGNNLAAQPMPVVLPPEVLRCKKRLNPGHNPVGDLDTDQPVYTKRCRY DESDLAAQYCNDFFSLPATQIIGTQASLMDYEMQATGGMMMMESETSFPA QQQQHQEQQQHPQQPHQYQRIHQHYQGHLHRANRDVSRCMMSHMI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32428-PB | 195 | CG32428-PB | 1..195 | 1..195 | 1066 | 100 | Plus |
CG32428-PA | 195 | CG32428-PA | 1..195 | 1..195 | 1066 | 100 | Plus |
CG32428-PC | 238 | CG32428-PC | 1..176 | 1..176 | 961 | 100 | Plus |