Clone LD43101 Report

Search the DGRC for LD43101

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:431
Well:1
Vector:pOT2
Associated Gene/TranscriptChc-RC
Protein status:LD43101.pep: gold
Preliminary Size:5388
Sequenced Size:5506

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9012 2002-06-06 Blastp of sequenced clone
CG9012 2003-01-01 Sim4 clustering to Release 3
Chc 2008-04-29 Release 5.5 accounting
Chc 2008-08-15 Release 5.9 accounting
Chc 2008-12-18 5.12 accounting

Clone Sequence Records

LD43101.complete Sequence

5506 bp (5506 high quality bases) assembled on 2002-06-06

GenBank Submission: AY119615

> LD43101.complete
TATAACTTTCACACCTCTACCTTGTCTTGCAGTCAGTATTTAGTCAAACA
AAAGAAAAATAAACTACATTTGTTAGAGCTTGATAAGAGCTCAGTTTGTC
TTCAGTGTGTGTGCCCGTCATCTAGCAACAAACCGACGTGATTATTTCGA
CTAAACGTTCCAATGGAAACCGAATCTTAAACCAGAAACCGACTAAACTC
GAACGCAATTAAACAACAATAAATCCTCGAAACAAATCAAATACAAACTG
TTACCAAGTGTGCAATTCAAGAAAACATCGTATTGGCATTGTTTTCGCAA
AGATACATTTACGTTGTAAAGGTCTGTCAATAACTAGACCTCACTGTAGT
AGTAAAGATGACGCAACCACTGCCCATCCGCTTTCAGGAGCATTTACAGC
TCACAAATGTCGGGATCAACGCCAATTCATTTTCATTCAGCACGCTCACG
ATGGAATCGGATAAGTTTATTTGCGTGCGGGAGAAGGTGAATGATACCGC
CCAAGTGGTCATCATTGACATGAACGATGCCACCAATCCCACGCGGCGTC
CCATCTCAGCGGATTCGGCTATCATGAATCCAGCTAGCAAGGTCATTGCG
CTCAAAGCGCAAAAGACGTTGCAGATCTTCAACATTGAGATGAAGTCGAA
GATGAAGGCGCATACCATGAACGAGGATGTGGTGTTCTGGAAGTGGATCT
CCCTCAATACGCTAGCTCTGGTCACAGAAACGAGTGTGTTCCATTGGTCC
ATGGAGGGCGATTCGATGCCGCAAAAGATGTTTGACCGGCATTCATCGCT
GAACGGTTGTCAAATCATCAACTACCGCTGCAATGCCTCCCAGCAGTGGC
TACTCTTGGTCGGCATTTCGGCACTGCCAAGTCGCGTTGCCGGTGCCATG
CAGTTGTATTCGGTGGAGCGTAAGGTGTCCCAGGCGATCGAGGGGCATGC
GGCCAGTTTTGCCACGTTTAAAATCGATGCCAACAAGGAGCCGACCACGC
TGTTCTGCTTTGCAGTTCGTACGGCCACTGGGGGCAAGCTTCATATTATC
GAAGTTGGTGCTCCGCCGAACGGCAATCAGCCGTTTGCCAAGAAGGCTGT
CGATGTCTTCTTTCCGCCGGAAGCACAAAATGATTTCCCTGTGGCTATGC
AAGTCTCTGCCAAGTACGACACCATCTACTTGATAACCAAGTATGGATAC
ATACATCTGTATGACATGGAGACGGCCACGTGCATATACATGAATCGTAT
ATCGGCCGATACGATCTTTGTTACCGCACCGCATGAGGCAAGTGGTGGCA
TCATTGGCGTCAATCGCAAGGGACAGGTCCTCTCCGTGACCGTCGACGAG
GAGCAGATCATTCCCTACATCAACACCGTTCTGCAGAATCCCGATTTGGC
CCTTCGCATGGCCGTGCGCAACAATTTGGCTGGTGCCGAAGATCTCTTTG
TGCGAAAGTTCAACAAGCTCTTTACAGCCGGCCAGTATGCTGAAGCGGCT
AAAGTTGCTGCCCTGGCACCCAAGGCCATTCTGCGTACGCCACAGACGAT
CCAGCGTTTCCAACAGGTGCAGACACCAGCTGGCTCCACGACTCCGCCGC
TGCTGCAATACTTTGGCATTCTCCTCGACCAGGGCAAGCTGAACAAGTTC
GAGTCTCTCGAGCTGTGCCGTCCCGTCTTGCTGCAGGGCAAGAAGCAGCT
GTGCGAGAAGTGGCTGAAGGAGGAGAAGTTGGAATGCAGCGAGGAGTTGG
GTGATCTGGTCAAGGCCTCCGATCTTACACTTGCCCTGTCCATCTATCTG
CGCGCAAATGTGCCCAACAAGGTTATCCAATGCTTTGCTGAGACTGGGCA
GTTCCAGAAGATTGTACTCTACGCCAAGAAGGTCAACTATACGCCCGATT
ACGTGTTCCTGCTGCGCTCCGTGATGCGAAGCAACCCGGAGCAAGGAGCT
GGTTTCGCCTCTATGTTGGTGGCCGAGGAAGAGCCACTGGCGGACATCAA
TCAGATTGTGGACATCTTCATGGAGCACTCCATGGTGCAGCAGTGCACTG
CATTCCTGCTGGACGCCCTCAAGCATAACCGTCCCGCCGAGGGTGCCCTC
CAGACGCGCCTGCTGGAAATGAATCTGATGTCTGCTCCGCAGGTGGCCGA
CGCCATCCTGGGCAATGCTATGTTCACCCACTACGATCGGGCCCACATTG
CCCAGCTGTGCGAGAAGGCTGGACTGCTCCAGCGCGCCCTCGAGCACTAC
ACGGATCTGTATGACATTAAGCGGGCCGTTGTGCACACGCACATGCTGAA
TGCCGAATGGCTGGTCAGTTTCTTTGGCACGCTGTCGGTGGAGGACTCGC
TGGAATGTCTGAAGGCAATGCTTACGGCGAATTTGCGCCAGAACTTGCAG
ATCTGTGTGCAGATTGCCACCAAGTATCACGAACAGCTGACCAACAAGGC
ACTGATTGATCTGTTCGAAGGTTTCAAGAGCTACGACGGACTGTTCTACT
TCCTGAGCAGCATTGTCAACTTCTCACAGGATCCCGAAGTGCACTTCAAA
TACATTCAGGCGGCATGCAAGACTAATCAGATTAAGGAGGTGGAGCGAAT
TTGCCGTGAATCAAACTGCTACAATCCCGAACGGGTGAAGAACTTCTTGA
AGGAGGCCAAGCTGACGGATCAGCTACCATTAATTATTGTTTGTGATCGT
TTTGATTTCGTGCACGACTTGGTGCTTTACCTGTATCGTAACAATCTGCA
GAAGTACATTGAGATCTATGTGCAGAAAGTGAATCCATCCCGCTTGCCAG
TGGTAGTGGGTGGTCTTCTTGATGTTGATTGCAGTGAGGATATAATTAAA
AATCTAATTCTCGTGGTCAAGGGACAATTCTCAACCGACGAACTGGTCGA
GGAGGTCGAGAAGCGCAACCGTCTCAAGCTTCTCCTTCCCTGGCTGGAGT
CCCGAGTTCACGAGGGCTGCGTCGAGCCAGCCACCCACAACGCGTTGGCC
AAGATCTACATTGACTCGAACAACAATCCCGAGAGATATCTTAAGGAGAA
TCAGTACTACGATAGCCGTGTGGTCGGTCGCTACTGCGAGAAGCGGGATC
CCCATTTGGCGTGTGTCGCCTACGAGCGTGGATTGTGCGATCGCGAGCTG
ATCGCCGTTTGTAACGAGAATTCTCTGTTCAAGAGCGAAGCACGCTACTT
GGTTGGTCGCCGCGACGCCGAACTCTGGGCCGAGGTCCTTTCGGAGAGCA
ATCCATACAAGCGCCAGTTGATCGATCAGGTGGTACAGACCGCTTTGTCC
GAGACCCAGGATCCCGATGACATCTCTGTAACGGTCAAAGCATTCATGAC
CGCCGATTTGCCCAATGAGCTGATCGAACTTCTCGAGAAGATTATTCTGG
ACTCGTCCGTCTTTAGCGACCATCGCAATCTGCAAAACTTGCTCATTCTC
ACAGCCATCAAGGCTGATCGCACCCGAGTCATGGACTACATTAACCGGCT
GGAGAACTACGATGCACCGGACATCGCGAACATTGCGATCAGTAATCAGT
TGTACGAAGAAGCCTTCGCCATCTTCAAGAAGTTCGATGTGAACACATCG
GCCATTCAGGTGCTCATCGATCAAGTGAACAACCTGGAGCGGGCTAACGA
GTTCGCCGAGCGGTGCAATGAGCCGGCCGTTTGGTCGCAGCTGGCCAAGG
CCCAACTGCAGCAGGGTCTGGTCAAGGAGGCTATCGACTCGTACATCAAG
GCTGATGATCCGAGCGCTTACGTCGATGTCGTCGATGTGGCCAGCAAGGT
GGAGTCTTGGGATGACCTCGTTCGCTATCTGCAAATGGCACGCAAGAAGG
CGCGCGAATCTTACATCGAGAGCGAATTGATCTATGCCTATGCGCGCACT
GGACGTCTGGCCGATCTGGAGGAGTTCATTTCGGGTCCCAACCATGCCGA
TATCCAGAAGATTGGCAACCGTTGCTTCAGCGACGGCATGTACGATGCAG
CGAAGCTACTGTACAACAATGTGAGCAACTTTGCCCGTCTGGCCATCACT
TTGGTCTACCTGAAGGAGTTCCAAGGGGCCGTGGACTCGGCGCGGAAAGC
CAACTCAACGCGCACATGGAAGGAGGTGTGCTTCGCCTGCGTGGACGCCG
AGGAGTTTAGGCTAGCTCAGATGTGCGGCCTGCACATTGTGGTGCATGCC
GATGAGCTAGAGGATCTGATTAACTACTATCAAAACCGTGGATACTTCGA
TGAATTGATTGCGCTACTCGAGTCGGCTTTGGGGCTGGAACGTGCGCACA
TGGGAATGTTCACCGAATTAGCTATACTTTATTCAAAATTCAAACCTTCC
AAAATGCGCGAACACTTGGAGCTGTTCTGGTCTCGCGTTAACATTCCAAA
AGTTCTGCGTGCCGCTGAATCGGCTCACTTGTGGTCGGAGCTGGTGTTCC
TGTACGATAAGTACGAGGAGTACGATAACGCCGTCCTGGCCATGATGGCT
CATCCCACGGAGGCGTGGCGCGAGGGGCACTTTAAGGACATTATCACCAA
GGTAGCCAACATTGAGCTGTACTACAAGGCTATCGAATTCTATTTGGACT
TCAAGCCGCTGCTGTTGAACGACATGCTGCTCGTGCTGGCACCCAGGATG
GATCACACTCGTGCTGTTAGTTACTTCTCCAAAACCGGCTATTTGCCACT
CGTCAAGCCTTATCTGCGTTCAGTCCAATCTCTCAATAACAAGGCAATCA
ACGAAGCCCTGAACGGACTCTTAATCGACGAGGAGGACTACCAGGGTCTG
CGCAATTCGATCGATGGATTTGATAACTTTGACAACATTGCGTTGGCACA
GAAACTCGAAAAGCACGAACTTACCGAATTCCGTAGGATTGCCGCCTACT
TGTACAAGGGAAATAATCGCTGGAAACAGAGCGTTGAGCTCTGCAAAAAG
GATAAACTCTACAAGGATGCTATGGAGTACGCCGCCGAATCTTGCAAGCA
AGATATTGCCGAAGAGTTGTTGGGTTGGTTCCTAGAACGTGACGCTTACG
ATTGTTTTGCAGCTTGTCTTTATCAGTGTTACGACTTGCTGCGCCCTGAT
GTTATCTTGGAGTTGGCCTGGAAACACAAAATCGTTGACTTTGCCATGCC
CTATTTGATTCAGGTTCTGCGCGAATACACAACAAAGGTGGACAAACTGG
AGTTGAACGAGGCTCAGCGCGAGAAGGAGGACGATTCCACTGAGCACAAA
AACATTATTCAGATGGAGCCACAACTGATGATCACCGCTGGCCCAGCAAT
GGGCATTCCTCCACAATATGCACAGAATTATCCACCTGGTGCAGCAACGG
TAACGGCGGCAGGAGGACGCAACATGGGCTATCCCTACTTGTAGGACTTG
CGCCCGATAATGAGATCATCAAAACAACTTTAAAAACAAATGTATCAGCA
TTAAAGGAATACCAATAAAATAAGAAAAATAATCTATTAAAAAAAAAAAA
AAAAAA

LD43101.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:54:17
Subject Length Description Subject Range Query Range Score Percent Strand
Chc.l 6383 Chc.l 196..5536 150..5490 26705 100 Plus
Chc.h 6884 Chc.h 196..5536 150..5490 26705 100 Plus
Chc-RC 5726 Chc-RC 196..5536 150..5490 26705 100 Plus
Chc.l 6383 Chc.l 9..158 1..150 750 100 Plus
Chc.h 6884 Chc.h 9..158 1..150 750 100 Plus
Chc-RC 5726 Chc-RC 9..158 1..150 750 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:12:40
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 15718782..15723086 4910..606 21465 99.9 Minus
chrX 22417052 chrX 15718009..15718338 5488..5159 1635 99.7 Minus
chrX 22417052 chrX 15723954..15724202 399..151 1230 99.6 Minus
chrX 22417052 chrX 15723323..15723534 607..396 1060 100 Minus
chrX 22417052 chrX 15718547..15718714 5076..4909 840 100 Minus
chrX 22417052 chrX 15725163..15725312 150..1 750 100 Minus
chrX 22417052 chrX 15718392..15718483 5165..5074 460 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:38:20 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:12:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15828951..15833255 4910..606 21525 100 Minus
X 23542271 X 15828176..15828507 5490..5159 1660 100 Minus
X 23542271 X 15834123..15834371 399..151 1245 100 Minus
X 23542271 X 15833492..15833703 607..396 1060 100 Minus
X 23542271 X 15828716..15828883 5076..4909 840 100 Minus
X 23542271 X 15835325..15835474 150..1 750 100 Minus
X 23542271 X 15828561..15828652 5165..5074 460 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:13:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 15837049..15841353 4910..606 21525 100 Minus
X 23527363 X 15836274..15836605 5490..5159 1660 100 Minus
X 23527363 X 15842221..15842469 399..151 1245 100 Minus
X 23527363 X 15841590..15841801 607..396 1060 100 Minus
X 23527363 X 15836814..15836981 5076..4909 840 100 Minus
X 23527363 X 15843423..15843572 150..1 750 100 Minus
X 23527363 X 15836659..15836750 5165..5074 460 100 Minus
Blast to na_te.dros performed on 2019-03-15 16:12:38 has no hits.

LD43101.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:13:45 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 15725163..15725312 1..150 100   Minus
chrX 15723323..15723530 400..607 100 <- Minus
chrX 15723954..15724202 151..399 99 <- Minus
chrX 15718009..15718333 5164..5488 99 <- Minus
chrX 15718394..15718480 5077..5163 100 <- Minus
chrX 15718547..15718713 4910..5076 100 <- Minus
chrX 15718783..15723084 608..4909 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:25:41 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
Chc-RC 1..5037 358..5394 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:51:30 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
Chc-RC 1..5037 358..5394 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:55:25 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
Chc-RE 1..5037 358..5394 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:33:48 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
Chc-RC 1..5037 358..5394 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:29:05 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
Chc-RE 1..5037 358..5394 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:02:49 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
Chc-RA 1..5488 1..5488 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:51:30 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
Chc-RA 1..5488 1..5488 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:55:25 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
Chc-RA 17..5504 1..5488 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:33:49 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
Chc-RA 1..5488 1..5488 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:29:05 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
Chc-RA 17..5504 1..5488 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:13:45 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
X 15828178..15828502 5164..5488 100 <- Minus
X 15828563..15828649 5077..5163 100 <- Minus
X 15828716..15828882 4910..5076 100 <- Minus
X 15828952..15833253 608..4909 100 <- Minus
X 15833492..15833699 400..607 100 <- Minus
X 15834123..15834371 151..399 100 <- Minus
X 15835325..15835474 1..150 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:13:45 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
X 15828178..15828502 5164..5488 100 <- Minus
X 15828563..15828649 5077..5163 100 <- Minus
X 15828716..15828882 4910..5076 100 <- Minus
X 15828952..15833253 608..4909 100 <- Minus
X 15833492..15833699 400..607 100 <- Minus
X 15834123..15834371 151..399 100 <- Minus
X 15835325..15835474 1..150 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:13:45 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
X 15828178..15828502 5164..5488 100 <- Minus
X 15828563..15828649 5077..5163 100 <- Minus
X 15828716..15828882 4910..5076 100 <- Minus
X 15828952..15833253 608..4909 100 <- Minus
X 15833492..15833699 400..607 100 <- Minus
X 15834123..15834371 151..399 100 <- Minus
X 15835325..15835474 1..150 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:55:25 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15727525..15727732 400..607 100 <- Minus
arm_X 15722211..15722535 5164..5488 100 <- Minus
arm_X 15722596..15722682 5077..5163 100 <- Minus
arm_X 15722749..15722915 4910..5076 100 <- Minus
arm_X 15722985..15727286 608..4909 100 <- Minus
arm_X 15728156..15728404 151..399 100 <- Minus
arm_X 15729358..15729507 1..150 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:14:50 Download gff for LD43101.complete
Subject Subject Range Query Range Percent Splice Strand
X 15843423..15843572 1..150 100   Minus
X 15842221..15842469 151..399 100 <- Minus
X 15836276..15836600 5164..5488 100 <- Minus
X 15836661..15836747 5077..5163 100 <- Minus
X 15836814..15836980 4910..5076 100 <- Minus
X 15837050..15841351 608..4909 100 <- Minus
X 15841590..15841797 400..607 100 <- Minus

LD43101.pep Sequence

Translation from 357 to 5393

> LD43101.pep
MTQPLPIRFQEHLQLTNVGINANSFSFSTLTMESDKFICVREKVNDTAQV
VIIDMNDATNPTRRPISADSAIMNPASKVIALKAQKTLQIFNIEMKSKMK
AHTMNEDVVFWKWISLNTLALVTETSVFHWSMEGDSMPQKMFDRHSSLNG
CQIINYRCNASQQWLLLVGISALPSRVAGAMQLYSVERKVSQAIEGHAAS
FATFKIDANKEPTTLFCFAVRTATGGKLHIIEVGAPPNGNQPFAKKAVDV
FFPPEAQNDFPVAMQVSAKYDTIYLITKYGYIHLYDMETATCIYMNRISA
DTIFVTAPHEASGGIIGVNRKGQVLSVTVDEEQIIPYINTVLQNPDLALR
MAVRNNLAGAEDLFVRKFNKLFTAGQYAEAAKVAALAPKAILRTPQTIQR
FQQVQTPAGSTTPPLLQYFGILLDQGKLNKFESLELCRPVLLQGKKQLCE
KWLKEEKLECSEELGDLVKASDLTLALSIYLRANVPNKVIQCFAETGQFQ
KIVLYAKKVNYTPDYVFLLRSVMRSNPEQGAGFASMLVAEEEPLADINQI
VDIFMEHSMVQQCTAFLLDALKHNRPAEGALQTRLLEMNLMSAPQVADAI
LGNAMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHMLNAE
WLVSFFGTLSVEDSLECLKAMLTANLRQNLQICVQIATKYHEQLTNKALI
DLFEGFKSYDGLFYFLSSIVNFSQDPEVHFKYIQAACKTNQIKEVERICR
ESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKY
IEIYVQKVNPSRLPVVVGGLLDVDCSEDIIKNLILVVKGQFSTDELVEEV
EKRNRLKLLLPWLESRVHEGCVEPATHNALAKIYIDSNNNPERYLKENQY
YDSRVVGRYCEKRDPHLACVAYERGLCDRELIAVCNENSLFKSEARYLVG
RRDAELWAEVLSESNPYKRQLIDQVVQTALSETQDPDDISVTVKAFMTAD
LPNELIELLEKIILDSSVFSDHRNLQNLLILTAIKADRTRVMDYINRLEN
YDAPDIANIAISNQLYEEAFAIFKKFDVNTSAIQVLIDQVNNLERANEFA
ERCNEPAVWSQLAKAQLQQGLVKEAIDSYIKADDPSAYVDVVDVASKVES
WDDLVRYLQMARKKARESYIESELIYAYARTGRLADLEEFISGPNHADIQ
KIGNRCFSDGMYDAAKLLYNNVSNFARLAITLVYLKEFQGAVDSARKANS
TRTWKEVCFACVDAEEFRLAQMCGLHIVVHADELEDLINYYQNRGYFDEL
IALLESALGLERAHMGMFTELAILYSKFKPSKMREHLELFWSRVNIPKVL
RAAESAHLWSELVFLYDKYEEYDNAVLAMMAHPTEAWREGHFKDIITKVA
NIELYYKAIEFYLDFKPLLLNDMLLVLAPRMDHTRAVSYFSKTGYLPLVK
PYLRSVQSLNNKAINEALNGLLIDEEDYQGLRNSIDGFDNFDNIALAQKL
EKHELTEFRRIAAYLYKGNNRWKQSVELCKKDKLYKDAMEYAAESCKQDI
AEELLGWFLERDAYDCFAACLYQCYDLLRPDVILELAWKHKIVDFAMPYL
IQVLREYTTKVDKLELNEAQREKEDDSTEHKNIIQMEPQLMITAGPAMGI
PPQYAQNYPPGAATVTAAGGRNMGYPYL*

LD43101.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:59:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11191-PA 1679 GF11191-PA 1..1679 1..1678 8765 96.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:59:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19369-PA 1678 GG19369-PA 1..1678 1..1678 9041 99.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:59:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24776-PA 1681 GH24776-PA 1..1681 1..1678 8844 97.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:43
Subject Length Description Subject Range Query Range Score Percent Strand
Chc-PG 1678 CG9012-PG 1..1678 1..1678 8672 100 Plus
Chc-PF 1678 CG9012-PF 1..1678 1..1678 8672 100 Plus
Chc-PE 1678 CG9012-PE 1..1678 1..1678 8672 100 Plus
Chc-PD 1678 CG9012-PD 1..1678 1..1678 8672 100 Plus
Chc-PC 1678 CG9012-PC 1..1678 1..1678 8672 100 Plus
Chc-PB 1678 CG9012-PB 1..1678 1..1678 8672 100 Plus
Chc-PA 1678 CG9012-PA 1..1678 1..1678 8672 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:59:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14823-PA 1680 GI14823-PA 1..1680 1..1678 8824 97.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:59:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11922-PA 1680 GL11922-PA 1..1680 1..1678 8881 97.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:59:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21476-PA 1584 GA21476-PA 1..1573 1..1573 8346 98.3 Plus
Dpse\GA22551-PA 107 GA22551-PA 1..107 1574..1678 490 86 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:59:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22522-PA 1678 GM22522-PA 1..1678 1..1678 9037 99.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:59:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15774-PA 281 GD15774-PA 1..206 1..206 1110 99.5 Plus
Dsim\GD15774-PA 281 GD15774-PA 205..281 1602..1678 422 98.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:59:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19488-PA 1427 GJ19488-PA 208..1427 460..1678 6431 97.6 Plus
Dvir\GJ19488-PA 1427 GJ19488-PA 1..203 1..203 1080 98 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:59:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25278-PA 1681 GK25278-PA 1..1681 1..1678 8791 96.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:59:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16016-PA 1678 GE16016-PA 1..1678 1..1678 9036 99.9 Plus

LD43101.hyp Sequence

Translation from 357 to 5393

> LD43101.hyp
MTQPLPIRFQEHLQLTNVGINANSFSFSTLTMESDKFICVREKVNDTAQV
VIIDMNDATNPTRRPISADSAIMNPASKVIALKAQKTLQIFNIEMKSKMK
AHTMNEDVVFWKWISLNTLALVTETSVFHWSMEGDSMPQKMFDRHSSLNG
CQIINYRCNASQQWLLLVGISALPSRVAGAMQLYSVERKVSQAIEGHAAS
FATFKIDANKEPTTLFCFAVRTATGGKLHIIEVGAPPNGNQPFAKKAVDV
FFPPEAQNDFPVAMQVSAKYDTIYLITKYGYIHLYDMETATCIYMNRISA
DTIFVTAPHEASGGIIGVNRKGQVLSVTVDEEQIIPYINTVLQNPDLALR
MAVRNNLAGAEDLFVRKFNKLFTAGQYAEAAKVAALAPKAILRTPQTIQR
FQQVQTPAGSTTPPLLQYFGILLDQGKLNKFESLELCRPVLLQGKKQLCE
KWLKEEKLECSEELGDLVKASDLTLALSIYLRANVPNKVIQCFAETGQFQ
KIVLYAKKVNYTPDYVFLLRSVMRSNPEQGAGFASMLVAEEEPLADINQI
VDIFMEHSMVQQCTAFLLDALKHNRPAEGALQTRLLEMNLMSAPQVADAI
LGNAMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHMLNAE
WLVSFFGTLSVEDSLECLKAMLTANLRQNLQICVQIATKYHEQLTNKALI
DLFEGFKSYDGLFYFLSSIVNFSQDPEVHFKYIQAACKTNQIKEVERICR
ESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKY
IEIYVQKVNPSRLPVVVGGLLDVDCSEDIIKNLILVVKGQFSTDELVEEV
EKRNRLKLLLPWLESRVHEGCVEPATHNALAKIYIDSNNNPERYLKENQY
YDSRVVGRYCEKRDPHLACVAYERGLCDRELIAVCNENSLFKSEARYLVG
RRDAELWAEVLSESNPYKRQLIDQVVQTALSETQDPDDISVTVKAFMTAD
LPNELIELLEKIILDSSVFSDHRNLQNLLILTAIKADRTRVMDYINRLEN
YDAPDIANIAISNQLYEEAFAIFKKFDVNTSAIQVLIDQVNNLERANEFA
ERCNEPAVWSQLAKAQLQQGLVKEAIDSYIKADDPSAYVDVVDVASKVES
WDDLVRYLQMARKKARESYIESELIYAYARTGRLADLEEFISGPNHADIQ
KIGNRCFSDGMYDAAKLLYNNVSNFARLAITLVYLKEFQGAVDSARKANS
TRTWKEVCFACVDAEEFRLAQMCGLHIVVHADELEDLINYYQNRGYFDEL
IALLESALGLERAHMGMFTELAILYSKFKPSKMREHLELFWSRVNIPKVL
RAAESAHLWSELVFLYDKYEEYDNAVLAMMAHPTEAWREGHFKDIITKVA
NIELYYKAIEFYLDFKPLLLNDMLLVLAPRMDHTRAVSYFSKTGYLPLVK
PYLRSVQSLNNKAINEALNGLLIDEEDYQGLRNSIDGFDNFDNIALAQKL
EKHELTEFRRIAAYLYKGNNRWKQSVELCKKDKLYKDAMEYAAESCKQDI
AEELLGWFLERDAYDCFAACLYQCYDLLRPDVILELAWKHKIVDFAMPYL
IQVLREYTTKVDKLELNEAQREKEDDSTEHKNIIQMEPQLMITAGPAMGI
PPQYAQNYPPGAATVTAAGGRNMGYPYL*

LD43101.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:08:14
Subject Length Description Subject Range Query Range Score Percent Strand
Chc-PG 1678 CG9012-PG 1..1678 1..1678 8672 100 Plus
Chc-PF 1678 CG9012-PF 1..1678 1..1678 8672 100 Plus
Chc-PE 1678 CG9012-PE 1..1678 1..1678 8672 100 Plus
Chc-PD 1678 CG9012-PD 1..1678 1..1678 8672 100 Plus
Chc-PC 1678 CG9012-PC 1..1678 1..1678 8672 100 Plus