BDGP Sequence Production Resources |
Search the DGRC for LD43175
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 431 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | yellow-b-RA |
Protein status: | LD43175.pep: gold |
Preliminary Size: | 1876 |
Sequenced Size: | 1644 |
Gene | Date | Evidence |
---|---|---|
CG17914 | 2001-01-01 | Release 2 assignment |
CG17914 | 2002-05-30 | Blastp of sequenced clone |
CG17914 | 2003-01-01 | Sim4 clustering to Release 3 |
yellow-b | 2008-04-29 | Release 5.5 accounting |
yellow-b | 2008-08-15 | Release 5.9 accounting |
yellow-b | 2008-12-18 | 5.12 accounting |
1644 bp (1644 high quality bases) assembled on 2002-05-30
GenBank Submission: AY118575
> LD43175.complete TGCTGCTCTTTGGTTGATCATAAGAAGTGAATTTATTGGAGACATGCTGC GATTCAGATTAGGCCTGCTACTTCTGTGGGCGGTCTCTGCCCTGGCGAAC GACAATCTTCGCGTAGCGTACGAGTGGCGGGAAATGGACTTCAAGTACGC CAATCCAGACCAAAGATGGTCGGCCATCGAGCGGGGCGAGTTCAAGCCGG CCAATGTGATACCCTTTGGCCTGGAGGTTGCCGGCCACCGACTCTTTGTC ACCCTGCCCAGATGGAGGGACGGAGTGCCGGCCTCGTTGGCCTACCTTGA TCTTAATGATACCTCCAGCAAGGGTCCAGCCTTGAAGCCATTCCCCAGCT GGCAGGCTCACAATCTCCAGGAAGCCGAACCGGAATTGGTTTCTCCATTC CGCGTGCGAGCCGATAGATGCGGACGCCTGTGGGTGCTCGACTCTAGGAT CTCCGGAGTCCTGGAGCAGACCAAGATCTATGGAGCAGCCCAGCTGCTGG TCTACGATCTGCACAATGATGATTTGTTGAGACGACACGTTTTGCCCGCC GGTCAGTTGAAGCAGGGATCTTTACTGGCCAATCTGGCGGTGGAGGACTC TGACTGTGAGAATACCTTTGCCTACGCAGCCGATTTGGGCAGTCCCGGCT TGGTGGTTTACTCATGGAAGGATGAGGAATCGTGGCGTGTGCAGCATCAC TTCTTCCACCCAGATCCAATGGCCGGTAACTTCAGCATCAATGGCATTGA GTTTCAATGGGATGATGGCCTATACGGACTGGCTCTATCGAAGCCCCTGG AAACGGGCTATGCCACATTGTACTTCCATCCCCTCTGCTCCACTACGGAA TTCTCGGTGGATACATCGATATTGCGTAACAAGACCCTGGCCACTTCGCC GATGATTTATCGAGAATTCAAGGTGCTGGGCTCCAGAGGACCGAACACCC AGGCTGGAGCCGAGTTCTTGGATCCGGATACCGGAGTCCTATTCTACGCC CTGCCCAATCTGAACGAAGTCGCCTGCTGGCGCACTGCCACAGACTTTAG TCACAGTTCCCAGAGCCGCATCCACATGAACAATGATACCTTGGTGTTCC CCAGTGACATCAAGGTTGATGATCAGAAACGTCTATGGGTCCTATCCAAT CAGCTACCCGTCTTCATCTACGATGAACTGTACGCCGGCTCAATAAACTT CCGTATCCTGACTGCCAGTGTTAAGGAGGCCATTGAGAATACAGCCTGTG AAATTAGAACTTCCCCTCTGCCAGATGTAATCAACAAACTGGGGGATATT CTCAATACTAACATCAAACTGAAGTCCAATTCGGCTTCTTCCCTTAGGAA CCTCAGCTCCCTTATGCTGATTGCCTTATGTTTGCTGATGAGCTTTAGAA TCTAGATTCCCGCAGCGGTACAAAAGTATCTTGCGCACTTGCGAACGAAA ATGTTTTATGTTTTTCAAGAACAGAGAACTTGAAAAATTTCTGTAATTTT AGCATTTTCACTGATTTCTTAAACGTACGAAATATTTTTATTTGAGTGCA ATTGTAATCTGTTAAGATGTAGGCTTAGAAAACTTAAACGTTGTACGTGA AGTTGATTAAATGTAAGAAGTGTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yellow-b-RA | 1707 | yellow-b-RA | 56..1679 | 1..1624 | 8120 | 100 | Plus |
yellow-b.a | 1665 | yellow-b.a | 70..1665 | 28..1623 | 7980 | 100 | Plus |
yellow-b.b | 1665 | yellow-b.b | 70..1665 | 28..1623 | 7980 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 16753119..16753145 | 1..27 | 100 | -> | Plus |
chr2L | 16754433..16754713 | 28..308 | 100 | -> | Plus |
chr2L | 16755726..16757040 | 309..1623 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-b-RA | 1..1362 | 44..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-b-RA | 1..1362 | 44..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-b-RA | 1..1362 | 44..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-b-RA | 1..1362 | 44..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-b-RA | 1..1362 | 44..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-b-RA | 37..1659 | 1..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-b-RA | 37..1659 | 1..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-b-RA | 37..1659 | 1..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-b-RA | 37..1659 | 1..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-b-RA | 37..1659 | 1..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16754372..16754398 | 1..27 | 100 | -> | Plus |
2L | 16755683..16755963 | 28..308 | 100 | -> | Plus |
2L | 16756969..16758283 | 309..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16754372..16754398 | 1..27 | 100 | -> | Plus |
2L | 16755683..16755963 | 28..308 | 100 | -> | Plus |
2L | 16756969..16758283 | 309..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16754372..16754398 | 1..27 | 100 | -> | Plus |
2L | 16755683..16755963 | 28..308 | 100 | -> | Plus |
2L | 16756969..16758283 | 309..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 16754372..16754398 | 1..27 | 100 | -> | Plus |
arm_2L | 16755683..16755963 | 28..308 | 100 | -> | Plus |
arm_2L | 16756969..16758283 | 309..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16755683..16755963 | 28..308 | 100 | -> | Plus |
2L | 16756969..16758283 | 309..1623 | 100 | Plus | |
2L | 16754372..16754398 | 1..27 | 100 | -> | Plus |
Translation from 0 to 1404
> LD43175.hyp AALWLIIRSEFIGDMLRFRLGLLLLWAVSALANDNLRVAYEWREMDFKYA NPDQRWSAIERGEFKPANVIPFGLEVAGHRLFVTLPRWRDGVPASLAYLD LNDTSSKGPALKPFPSWQAHNLQEAEPELVSPFRVRADRCGRLWVLDSRI SGVLEQTKIYGAAQLLVYDLHNDDLLRRHVLPAGQLKQGSLLANLAVEDS DCENTFAYAADLGSPGLVVYSWKDEESWRVQHHFFHPDPMAGNFSINGIE FQWDDGLYGLALSKPLETGYATLYFHPLCSTTEFSVDTSILRNKTLATSP MIYREFKVLGSRGPNTQAGAEFLDPDTGVLFYALPNLNEVACWRTATDFS HSSQSRIHMNNDTLVFPSDIKVDDQKRLWVLSNQLPVFIYDELYAGSINF RILTASVKEAIENTACEIRTSPLPDVINKLGDILNTNIKLKSNSASSLRN LSSLMLIALCLLMSFRI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yellow-b-PB | 453 | CG17914-PB | 1..453 | 15..467 | 2379 | 100 | Plus |
yellow-b-PA | 453 | CG17914-PA | 1..453 | 15..467 | 2379 | 100 | Plus |
yellow-c-PB | 438 | CG4182-PB | 6..438 | 15..418 | 840 | 37.6 | Plus |
yellow-c-PA | 438 | CG4182-PA | 6..438 | 15..418 | 840 | 37.6 | Plus |
y-PA | 541 | CG3757-PA | 25..410 | 36..421 | 772 | 37.5 | Plus |
Translation from 43 to 1404
> LD43175.pep MLRFRLGLLLLWAVSALANDNLRVAYEWREMDFKYANPDQRWSAIERGEF KPANVIPFGLEVAGHRLFVTLPRWRDGVPASLAYLDLNDTSSKGPALKPF PSWQAHNLQEAEPELVSPFRVRADRCGRLWVLDSRISGVLEQTKIYGAAQ LLVYDLHNDDLLRRHVLPAGQLKQGSLLANLAVEDSDCENTFAYAADLGS PGLVVYSWKDEESWRVQHHFFHPDPMAGNFSINGIEFQWDDGLYGLALSK PLETGYATLYFHPLCSTTEFSVDTSILRNKTLATSPMIYREFKVLGSRGP NTQAGAEFLDPDTGVLFYALPNLNEVACWRTATDFSHSSQSRIHMNNDTL VFPSDIKVDDQKRLWVLSNQLPVFIYDELYAGSINFRILTASVKEAIENT ACEIRTSPLPDVINKLGDILNTNIKLKSNSASSLRNLSSLMLIALCLLMS FRI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15359-PA | 453 | GF15359-PA | 19..453 | 19..453 | 2040 | 85.5 | Plus |
Dana\GF14904-PA | 438 | GF14904-PA | 11..438 | 6..404 | 842 | 37.3 | Plus |
Dana\y-PA | 546 | GF21448-PA | 27..412 | 22..407 | 778 | 37.8 | Plus |
Dana\GF18090-PA | 452 | GF18090-PA | 96..452 | 50..403 | 622 | 34.7 | Plus |
Dana\GF11858-PA | 411 | GF11858-PA | 30..410 | 31..402 | 432 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22769-PA | 453 | GG22769-PA | 12..453 | 12..453 | 2249 | 93.9 | Plus |
Dere\GG25141-PA | 434 | GG25141-PA | 6..434 | 1..404 | 823 | 36.8 | Plus |
Dere\y-PA | 541 | GG12780-PA | 25..410 | 22..407 | 796 | 38.3 | Plus |
Dere\GG16380-PA | 459 | GG16380-PA | 49..445 | 22..415 | 717 | 35.9 | Plus |
Dere\GG17085-PA | 452 | GG17085-PA | 96..452 | 50..403 | 609 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11563-PA | 464 | GH11563-PA | 9..426 | 6..427 | 1688 | 73.5 | Plus |
Dgri\GH10914-PA | 435 | GH10914-PA | 24..435 | 22..404 | 802 | 37 | Plus |
Dgri\GH24338-PA | 546 | GH24338-PA | 9..408 | 8..407 | 785 | 38 | Plus |
Dgri\GH23996-PA | 455 | GH23996-PA | 44..432 | 20..402 | 652 | 35.9 | Plus |
Dgri\GH19199-PA | 446 | GH19199-PA | 89..446 | 50..403 | 600 | 33.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yellow-b-PB | 453 | CG17914-PB | 1..453 | 1..453 | 2379 | 100 | Plus |
yellow-b-PA | 453 | CG17914-PA | 1..453 | 1..453 | 2379 | 100 | Plus |
yellow-c-PB | 438 | CG4182-PB | 6..438 | 1..404 | 840 | 37.6 | Plus |
yellow-c-PA | 438 | CG4182-PA | 6..438 | 1..404 | 840 | 37.6 | Plus |
y-PA | 541 | CG3757-PA | 25..410 | 22..407 | 772 | 37.5 | Plus |
yellow-h-PA | 463 | CG1629-PA | 49..440 | 18..402 | 724 | 37.3 | Plus |
yellow-f-PC | 413 | CG18550-PC | 4..413 | 6..403 | 626 | 33.2 | Plus |
yellow-f-PB | 418 | CG18550-PB | 4..418 | 6..403 | 625 | 32.8 | Plus |
yellow-f-PA | 429 | CG18550-PA | 4..429 | 6..403 | 616 | 31.9 | Plus |
yellow-f2-PA | 452 | CG8063-PA | 98..452 | 52..403 | 609 | 34.6 | Plus |
yellow-d2-PA | 412 | CG9891-PA | 16..411 | 13..402 | 428 | 29.2 | Plus |
yellow-e2-PB | 435 | CG17044-PB | 43..434 | 24..402 | 411 | 30 | Plus |
yellow-d-PA | 432 | CG9889-PA | 39..406 | 27..389 | 406 | 31.4 | Plus |
yellow-e-PA | 530 | CG9792-PA | 1..386 | 1..389 | 381 | 27.6 | Plus |
yellow-e3-PA | 409 | CG17045-PA | 27..399 | 41..404 | 322 | 28 | Plus |
yellow-g-PA | 393 | CG5717-PA | 46..373 | 30..377 | 185 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17054-PA | 454 | GI17054-PA | 10..426 | 9..428 | 1712 | 73.8 | Plus |
Dmoj\GI13248-PA | 432 | GI13248-PA | 2..432 | 4..404 | 828 | 37.6 | Plus |
Dmoj\GI21724-PA | 543 | GI21724-PA | 30..415 | 22..407 | 743 | 36.5 | Plus |
Dmoj\GI11002-PA | 470 | GI11002-PA | 49..446 | 16..402 | 684 | 37.5 | Plus |
Dmoj\GI24232-PA | 417 | GI24232-PA | 60..417 | 50..403 | 621 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18784-PA | 454 | GL18784-PA | 1..453 | 1..453 | 2049 | 82.8 | Plus |
Dper\GL26025-PA | 438 | GL26025-PA | 9..438 | 2..404 | 841 | 37.8 | Plus |
Dper\GL20376-PA | 482 | GL20376-PA | 34..421 | 22..409 | 789 | 38.1 | Plus |
Dper\GL18156-PA | 466 | GL18156-PA | 48..443 | 15..402 | 684 | 35.4 | Plus |
Dper\GL23151-PA | 436 | GL23151-PA | 80..436 | 50..403 | 620 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14722-PA | 454 | GA14722-PA | 1..453 | 1..453 | 2048 | 82.8 | Plus |
Dpse\GA18010-PA | 438 | GA18010-PA | 9..438 | 2..404 | 841 | 37.8 | Plus |
Dpse\y-PA | 560 | GA17665-PA | 17..419 | 9..407 | 783 | 37.9 | Plus |
Dpse\GA27858-PA | 427 | GA27858-PA | 9..404 | 15..402 | 685 | 35.4 | Plus |
Dpse\GA27163-PA | 460 | GA27163-PA | 104..460 | 50..403 | 627 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17203-PA | 453 | GM17203-PA | 1..453 | 1..453 | 2382 | 98.5 | Plus |
Dsec\GM15882-PA | 438 | GM15882-PA | 9..438 | 6..404 | 844 | 37.7 | Plus |
Dsec\GM25969-PA | 434 | GM25969-PA | 4..434 | 6..403 | 618 | 31.6 | Plus |
Dsec\GM25968-PA | 452 | GM25968-PA | 96..452 | 50..403 | 613 | 33.9 | Plus |
Dsec\y-PA | 426 | GM19059-PA | 9..321 | 6..317 | 591 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24079-PA | 453 | GD24079-PA | 1..453 | 1..453 | 2385 | 98.5 | Plus |
Dsim\GD23989-PA | 438 | GD23989-PA | 6..438 | 1..404 | 848 | 37.2 | Plus |
Dsim\GD20529-PA | 429 | GD20529-PA | 4..429 | 6..403 | 612 | 31.9 | Plus |
Dsim\GD20528-PA | 452 | GD20528-PA | 96..452 | 50..403 | 611 | 33.9 | Plus |
Dsim\y-PA | 406 | GD24705-PA | 9..354 | 6..351 | 597 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17304-PA | 466 | GJ17304-PA | 13..444 | 9..439 | 1795 | 76.8 | Plus |
Dvir\GJ11869-PA | 435 | GJ11869-PA | 21..434 | 19..403 | 811 | 38.5 | Plus |
Dvir\y-PA | 541 | GJ15591-PA | 27..412 | 22..407 | 763 | 37.5 | Plus |
Dvir\GJ14923-PA | 455 | GJ14923-PA | 41..432 | 21..402 | 705 | 38.3 | Plus |
Dvir\GJ10805-PA | 452 | GJ10805-PA | 95..452 | 50..403 | 620 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18231-PA | 415 | GK18231-PA | 7..390 | 6..389 | 1647 | 76.9 | Plus |
Dwil\GK18310-PA | 436 | GK18310-PA | 4..436 | 2..404 | 832 | 37.7 | Plus |
Dwil\GK25268-PA | 545 | GK25268-PA | 29..414 | 22..407 | 786 | 38.3 | Plus |
Dwil\GK13672-PA | 468 | GK13672-PA | 57..434 | 24..393 | 665 | 36.8 | Plus |
Dwil\GK12212-PA | 404 | GK12212-PA | 50..404 | 54..403 | 579 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12764-PA | 453 | GE12764-PA | 1..453 | 1..453 | 2351 | 96.2 | Plus |
Dyak\GE20803-PA | 438 | GE20803-PA | 6..438 | 1..404 | 845 | 37 | Plus |
Dyak\y-PA | 541 | GE16608-PA | 25..410 | 22..407 | 779 | 37.5 | Plus |
Dyak\GE14541-PA | 463 | GE14541-PA | 53..449 | 22..415 | 688 | 35.4 | Plus |
Dyak\GE24475-PA | 434 | GE24475-PA | 4..434 | 6..403 | 624 | 31.9 | Plus |