![]() | BDGP Sequence Production Resources |
Search the DGRC for LD43196
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 431 |
Well: | 96 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5262-RA |
Protein status: | LD43196.pep: gold |
Preliminary Size: | 1628 |
Sequenced Size: | 1921 |
Gene | Date | Evidence |
---|---|---|
CG5262 | 2001-01-01 | Release 2 assignment |
CG5262 | 2002-05-14 | Blastp of sequenced clone |
CG5262 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5262 | 2008-04-29 | Release 5.5 accounting |
CG5262 | 2008-08-15 | Release 5.9 accounting |
CG5262 | 2008-12-18 | 5.12 accounting |
1921 bp (1921 high quality bases) assembled on 2002-05-14
GenBank Submission: AY118576
> LD43196.complete AACAGTTGGGCACACTGCATTGAGTGCACTATCTGTTCTATTATTGTTTT CTTTTTGTTAAGAGTTTGATTGAATCGGATTGGATAGAAGCCTGGTGAAA AGACAAAGAACCAGCGTAAAGATGCCTCGCCTTGTCAATGGCCGCGAAGC CGCGCCCACGTACTCGAATCTGGTTGGCTTCATATTCATTTTCAATCTAA TCGTTGGAACCGGAGCGCTGACGCTACCCGGAGTCTTTGCCAGGGCAGGA TGGATGCTTTCCCTGATCGTCATTGTTCTGCTGGCCATCATCAGTTACAT GACGGTCACTTTTATCATAGAAGCAATGGCTTGTGCGAATGCAATCAGGA ATTGGCAGACTCTGCAGGCCCTGCGCCAAAGTCGCAGTTCCGCCGAAAAC AGTGAAAACGATGATAATGCTGATGATGTTTCGCTGGCATCGGGAGCCGA GCAAGTTGGCGATTTCGAGCGGGTTCCGCTGACCATCCAAAACCGGGAGT TCCACTACTATCAGCTGTCCCACAAATTCGAACTTGGCGAAATGGCGACA CTATTCTTTAATGAGTTTGGCCGCGTAATGTTCTATCTCTGCCTGATTGT TTATCTTTACGGGGATCTGAGCATATATTCCGCCGCCGTGGCAAGAAGTC TGCGTGACGTCGTATGTGACCAAACAAATGGAACGGATACTAATAACTTG ATGTATTGGCCCGGAGACTTTGAGAACAATACATCTCTGGCCTGCTGGAA GGAACACACGATATCTCGCTTGAACATGTACAGGGTGTTGCTCATAGGAT TCACATTGATCTTTGGTCCATTTGTGTACTTTAATGTGCAGAAAACGAAG TACCTGCAGATGCTGACCGCTGCTTTTCGGTGGATGGCTTTTACCCTGAT GATCTGCATATCGCTAAAACTTTTGATTTCCAGAGGTGCCAAAGGTCATC CAGCGACCTTTAATGTATATGGAATTCCCTCTCTTTTCGGCGCCTGTGTT TACTCCTTCATGTGCCACCACTCACTGCCCAGTTTGCTGGCGCCCATCAG ACACAAGTCAATGGTTTCCAAAATTCTATCCATTGACTACATAATCATTT GTGCATTTTACATTCTACTGGCCATGACAGGCATTTTTGCCTTCGAACGA ATCGAAGACCTTTACACATTAGATTTTTTGCCCTACGATGTGGCCTACGT AGACTTTTGGTCAGGTCTATTGATTTGCATTGATTACTTCCTTGCACTTT TTCCCATATTTACCCTGTCAACCAGTTTTCCCATTGTTGCCATAACGCTG AAGAACAACCTTCAATCTCTATTCCTAGACATGTCGCAATATGAATCCTA TAGCGTTATCCTACGCCTGTGCTTCCCTTTGCTCGCCATAATTCCGCCTT TTTGTATCACCTATTTCACTGAAAGTTTATCCAGTTTGGTGGCATTTACT GGCACCTACGCAGGCACTGGCATTCAATACATTATCCCCGTTTTCTTGGT TTACTTTGCGAGACGCACTTGCTCAGAGCTCCTGGGAAGCGGCGTAGTCA ATCGTTTTAAAAGTCCTTTCAAGTCCAGTGCCTGGCTAGTTTTCGTCTTC ATTTGGTCAATTTTATGCGTCTGTTTGGTATCTATAAATTTGTTCAGTTA AGTTATCTTATCTGCCAATGTGGAGATATTTTACGGCATTGAGTTTATTA CCGGCTAGTAAAGTCCCATGTCATTTATTTTTAAAGAAATACTATCAAAC TAATGTAGTTGTACATATAAAATAAAGAATATATGTAAATTAATCGAATT TTAGCAACGTAAGTCAGTATTGAAATCGGCTGTGACACAAATTTTCAATA TATTTTTTATATAATATCTGGAATGTTAAATTCAAATAAAGTGAAAGCAT AACCAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5262-RA | 2096 | CG5262-RA | 6..1911 | 1..1906 | 9530 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20417106..20418123 | 1904..887 | 5075 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 20418522..20419016 | 666..172 | 2475 | 100 | Minus |
chr3L | 24539361 | chr3L | 20418175..20418396 | 887..666 | 1110 | 100 | Minus |
chr3L | 24539361 | chr3L | 20419317..20419490 | 174..1 | 870 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20428098..20429117 | 1906..887 | 5100 | 100 | Minus |
3L | 28110227 | 3L | 20429516..20430010 | 666..172 | 2475 | 100 | Minus |
3L | 28110227 | 3L | 20429169..20429390 | 887..666 | 1110 | 100 | Minus |
3L | 28110227 | 3L | 20430311..20430484 | 174..1 | 870 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20421198..20422217 | 1906..887 | 5100 | 100 | Minus |
3L | 28103327 | 3L | 20422616..20423110 | 666..172 | 2475 | 100 | Minus |
3L | 28103327 | 3L | 20422269..20422490 | 887..666 | 1110 | 100 | Minus |
3L | 28103327 | 3L | 20423411..20423584 | 174..1 | 870 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20417106..20418122 | 888..1904 | 97 | <- | Minus |
chr3L | 20418175..20418395 | 667..887 | 100 | <- | Minus |
chr3L | 20418522..20419015 | 173..666 | 100 | <- | Minus |
chr3L | 20419319..20419490 | 1..172 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5262-RA | 1..1530 | 122..1651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5262-RA | 1..1530 | 122..1651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5262-RA | 1..1530 | 122..1651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5262-RA | 1..1530 | 122..1651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5262-RA | 1..1530 | 122..1651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5262-RA | 1..1904 | 1..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5262-RA | 1..1904 | 1..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5262-RA | 1..1895 | 10..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5262-RA | 1..1904 | 1..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5262-RA | 1..1895 | 10..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20428100..20429116 | 888..1904 | 100 | <- | Minus |
3L | 20429169..20429389 | 667..887 | 100 | <- | Minus |
3L | 20429516..20430009 | 173..666 | 100 | <- | Minus |
3L | 20430313..20430484 | 1..172 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20428100..20429116 | 888..1904 | 100 | <- | Minus |
3L | 20429169..20429389 | 667..887 | 100 | <- | Minus |
3L | 20429516..20430009 | 173..666 | 100 | <- | Minus |
3L | 20430313..20430484 | 1..172 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20428100..20429116 | 888..1904 | 100 | <- | Minus |
3L | 20429169..20429389 | 667..887 | 100 | <- | Minus |
3L | 20429516..20430009 | 173..666 | 100 | <- | Minus |
3L | 20430313..20430484 | 1..172 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20422269..20422489 | 667..887 | 100 | <- | Minus |
arm_3L | 20422616..20423109 | 173..666 | 100 | <- | Minus |
arm_3L | 20423413..20423584 | 1..172 | 100 | Minus | |
arm_3L | 20421200..20422216 | 888..1904 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20421200..20422216 | 888..1904 | 100 | <- | Minus |
3L | 20422269..20422489 | 667..887 | 100 | <- | Minus |
3L | 20422616..20423109 | 173..666 | 100 | <- | Minus |
3L | 20423413..20423584 | 1..172 | 100 | Minus |
Translation from 121 to 1650
> LD43196.pep MPRLVNGREAAPTYSNLVGFIFIFNLIVGTGALTLPGVFARAGWMLSLIV IVLLAIISYMTVTFIIEAMACANAIRNWQTLQALRQSRSSAENSENDDNA DDVSLASGAEQVGDFERVPLTIQNREFHYYQLSHKFELGEMATLFFNEFG RVMFYLCLIVYLYGDLSIYSAAVARSLRDVVCDQTNGTDTNNLMYWPGDF ENNTSLACWKEHTISRLNMYRVLLIGFTLIFGPFVYFNVQKTKYLQMLTA AFRWMAFTLMICISLKLLISRGAKGHPATFNVYGIPSLFGACVYSFMCHH SLPSLLAPIRHKSMVSKILSIDYIIICAFYILLAMTGIFAFERIEDLYTL DFLPYDVAYVDFWSGLLICIDYFLALFPIFTLSTSFPIVAITLKNNLQSL FLDMSQYESYSVILRLCFPLLAIIPPFCITYFTESLSSLVAFTGTYAGTG IQYIIPVFLVYFARRTCSELLGSGVVNRFKSPFKSSAWLVFVFIWSILCV CLVSINLFS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24135-PA | 481 | GF24135-PA | 1..479 | 1..480 | 2304 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13312-PA | 509 | GG13312-PA | 1..509 | 1..509 | 2616 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23942-PA | 510 | GH23942-PA | 13..508 | 11..507 | 1637 | 65 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5262-PB | 509 | CG5262-PB | 1..509 | 1..509 | 2643 | 100 | Plus |
CG5262-PA | 509 | CG5262-PA | 1..509 | 1..509 | 2643 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14123-PA | 486 | GI14123-PA | 1..485 | 18..508 | 1747 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11905-PA | 508 | GL11905-PA | 1..508 | 1..509 | 2229 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18769-PA | 508 | GA18769-PA | 1..508 | 1..509 | 2232 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22216-PA | 509 | GM22216-PA | 1..509 | 1..509 | 2643 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12188-PA | 509 | GD12188-PA | 1..509 | 1..509 | 2664 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19113-PA | 435 | GJ19113-PA | 1..435 | 69..509 | 1619 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20393-PA | 527 | GK20393-PA | 11..525 | 3..507 | 1903 | 72.1 | Plus |
Translation from 121 to 1650
> LD43196.hyp MPRLVNGREAAPTYSNLVGFIFIFNLIVGTGALTLPGVFARAGWMLSLIV IVLLAIISYMTVTFIIEAMACANAIRNWQTLQALRQSRSSAENSENDDNA DDVSLASGAEQVGDFERVPLTIQNREFHYYQLSHKFELGEMATLFFNEFG RVMFYLCLIVYLYGDLSIYSAAVARSLRDVVCDQTNGTDTNNLMYWPGDF ENNTSLACWKEHTISRLNMYRVLLIGFTLIFGPFVYFNVQKTKYLQMLTA AFRWMAFTLMICISLKLLISRGAKGHPATFNVYGIPSLFGACVYSFMCHH SLPSLLAPIRHKSMVSKILSIDYIIICAFYILLAMTGIFAFERIEDLYTL DFLPYDVAYVDFWSGLLICIDYFLALFPIFTLSTSFPIVAITLKNNLQSL FLDMSQYESYSVILRLCFPLLAIIPPFCITYFTESLSSLVAFTGTYAGTG IQYIIPVFLVYFARRTCSELLGSGVVNRFKSPFKSSAWLVFVFIWSILCV CLVSINLFS*