BDGP Sequence Production Resources |
Search the DGRC for LD43280
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 432 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | Orc4-RA |
Protein status: | LD43280.pep: gold |
Preliminary Size: | 1776 |
Sequenced Size: | 1578 |
Gene | Date | Evidence |
---|---|---|
CG2917 | 2001-01-01 | Release 2 assignment |
CG2917 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2917 | 2003-02-24 | Blastp of sequenced clone |
Orc4 | 2008-04-29 | Release 5.5 accounting |
Orc4 | 2008-08-15 | Release 5.9 accounting |
Orc4 | 2008-12-18 | 5.12 accounting |
1578 bp (1578 high quality bases) assembled on 2003-02-24
GenBank Submission: BT004868
> LD43280.complete ACTATCTGTGCGTCCATTTAACTAATAAATAAGGAGGAATAAAGGAGTTC CGATCCGAGAGCGAAAATGCCGGAGGCGGATAGGGAGCTGGTCAGCATCA GGCGCTTCCTGAAGGAGCGCCTCCAGCGAGACTACACCACCTTGAGGGGC TACGCAAAGGAGCGGTCCAATGTGCGCCTATTGCTGCAACGCACAGCTGA AATGGGGGAATCCAACTCCTTGCTGCTCCTTGGGCCGCGGGGATCCGGAA AGACAACGCTCATCAACTCCGTGCTGGCCGATTTGCTGCCCAATAAATCG TTCGGGGAAAACACTCTCATCGTCCACCTGGACGGTAATCTGCACACGGA CGACCGAGTGGCCCTGAAGTCCATCACTGTGCAGATGCAGCTGGAGAACG CTGCGGATGGGAAAGTGTTCGGATCGTTCGCCGAGAACCTCGCCTTCCTG CTGCAATGCCTCAAGGCGGGTGGCAAGCATTCCAAGAGCGTGATCTTTAT TCTCGAGGAGTTCGACCTCTTCTGTGCTCACCACAACCAGACCCTGCTCT ACAACCTCTTCGACGTCTCCCAGTCAGCCCAGGCGCCCATCTGTGTACTT GGCGTTACCTGTCGCCTCGACGTGATCGAGCTGCTGGAGAAGCGGGTCAA GTCGCGTTTCTCGCACCGGCAGGTCTTTCTCTTTCCCAGCTTGCGGCGCT TTGAGGATTACGTTGACCTGTGCAGGGATCTACTGTCCCTCCCGACCGGC AATTCACTGTTGCTGGCGGCGGAGAAAATCTATAACCTACAAAACATCCA GTCGGGGGCACTTTACTTCTCCCGCAACCATTTTGACCCCGGGGAGTACG GCTTTTCGCCCAGACTACGCGATGCCTGGAACAAGCAAATATGCAAAGTC CTGGCCACTCAGCAGGCAAGAAGCACCCTCCAAGCGCTCCATGACTTCGA CATTAGCGAGGCCTATCTCAAGAACTTCCTATTCCGCCTGGTGGCACATC TCCGACCGCAATCTCCCCACATCACAGCCGAAAAAATGGCTGCAGTGGGA TCACAGTTTGAGGGCGACGACAAGATAGAGCTGCTTTGCGGGCTCTCAGT CCTAGAGCTGTGCCTGATCATCGCCATCAAGCACCATTCGCAGATTTACG ATCGCGATTCCTTCAACTTCGAGATCATTTACGCGCGCTTTTCCAAGTTT GCCAAAGTGTCCACCACAATGCAGGCCGTGGAGCGGTCCATTGTCCTGAA GGCCTTCGAGCATTTACGCATCGCAGAGCTGATCATGCCGCTCACCGGTG GAGCTGGAGGGGGCGTAGGTAAGGTGCAGAAAGAGTTTGAGATGCATAAG CTGGCGCTGACATACAGCCAGATTCACCACTGTATGCAGCGATACCAGGC CCTTCCCACAGAGGTTGCTCAGTGGGCGCAAAGCTCTCTGATTTAGCAGC AGATCAGAAATACTTTGTATATTTATTTATTTAAAAAAAATTGTACCGAA TCATTTAGTTGGTAAAGCCCTGTTTTGGGAAAATAAACTAATTTTAATTT ATAAAACGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Orc4-RA | 1615 | Orc4-RA | 56..1615 | 1..1560 | 7800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20681680..20682980 | 259..1559 | 98 | <- | Minus |
chr2R | 20683041..20683298 | 1..258 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc4-RA | 1..1380 | 67..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc4-RA | 1..1380 | 67..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc4-RA | 1..1380 | 67..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc4-RA | 1..1380 | 67..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc4-RA | 1..1380 | 67..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc4-RA | 47..1605 | 1..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc4-RA | 47..1605 | 1..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc4-RA | 57..1615 | 1..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc4-RA | 47..1605 | 1..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc4-RA | 57..1615 | 1..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24795740..24797040 | 259..1559 | 100 | <- | Minus |
2R | 24797101..24797358 | 1..258 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24795740..24797040 | 259..1559 | 100 | <- | Minus |
2R | 24797101..24797358 | 1..258 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24795740..24797040 | 259..1559 | 100 | <- | Minus |
2R | 24797101..24797358 | 1..258 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20683263..20684563 | 259..1559 | 100 | <- | Minus |
arm_2R | 20684624..20684881 | 1..258 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24796957..24798257 | 259..1559 | 100 | <- | Minus |
2R | 24798318..24798575 | 1..258 | 100 | Minus |
Translation from 66 to 1445
> LD43280.hyp MPEADRELVSIRRFLKERLQRDYTTLRGYAKERSNVRLLLQRTAEMGESN SLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVAL KSITVQMQLENAADGKVFGSFAENLAFLLQCLKAGGKHSKSVIFILEEFD LFCAHHNQTLLYNLFDVSQSAQAPICVLGVTCRLDVIELLEKRVKSRFSH RQVFLFPSLRRFEDYVDLCRDLLSLPTGNSLLLAAEKIYNLQNIQSGALY FSRNHFDPGEYGFSPRLRDAWNKQICKVLATQQARSTLQALHDFDISEAY LKNFLFRLVAHLRPQSPHITAEKMAAVGSQFEGDDKIELLCGLSVLELCL IIAIKHHSQIYDRDSFNFEIIYARFSKFAKVSTTMQAVERSIVLKAFEHL RIAELIMPLTGGAGGGVGKVQKEFEMHKLALTYSQIHHCMQRYQALPTEV AQWAQSSLI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Orc4-PA | 459 | CG2917-PA | 1..459 | 1..459 | 2342 | 100 | Plus |
Translation from 66 to 1445
> LD43280.pep MPEADRELVSIRRFLKERLQRDYTTLRGYAKERSNVRLLLQRTAEMGESN SLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVAL KSITVQMQLENAADGKVFGSFAENLAFLLQCLKAGGKHSKSVIFILEEFD LFCAHHNQTLLYNLFDVSQSAQAPICVLGVTCRLDVIELLEKRVKSRFSH RQVFLFPSLRRFEDYVDLCRDLLSLPTGNSLLLAAEKIYNLQNIQSGALY FSRNHFDPGEYGFSPRLRDAWNKQICKVLATQQARSTLQALHDFDISEAY LKNFLFRLVAHLRPQSPHITAEKMAAVGSQFEGDDKIELLCGLSVLELCL IIAIKHHSQIYDRDSFNFEIIYARFSKFAKVSTTMQAVERSIVLKAFEHL RIAELIMPLTGGAGGGVGKVQKEFEMHKLALTYSQIHHCMQRYQALPTEV AQWAQSSLI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11538-PA | 464 | GF11538-PA | 8..464 | 3..459 | 1809 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19886-PA | 459 | GG19886-PA | 1..459 | 1..459 | 2237 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21533-PA | 456 | GH21533-PA | 1..456 | 1..459 | 1857 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Orc4-PA | 459 | CG2917-PA | 1..459 | 1..459 | 2342 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19505-PA | 456 | GI19505-PA | 1..456 | 1..459 | 1856 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17693-PA | 456 | GL17693-PA | 1..456 | 1..459 | 1884 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15517-PA | 456 | GA15517-PA | 1..456 | 1..459 | 1882 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11786-PA | 459 | GM11786-PA | 1..459 | 1..459 | 2294 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24914-PA | 567 | GD24914-PA | 168..567 | 60..459 | 1985 | 94.5 | Plus |
Dsim\GD24914-PA | 567 | GD24914-PA | 1..172 | 1..172 | 878 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21075-PA | 456 | GJ21075-PA | 1..456 | 1..459 | 1877 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21644-PA | 458 | GK21644-PA | 1..458 | 1..459 | 1816 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11410-PA | 459 | GE11410-PA | 1..459 | 1..459 | 2218 | 91.3 | Plus |