BDGP Sequence Production Resources |
Search the DGRC for LD43412
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 434 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | CG18870-RA |
Protein status: | LD43412.pep: gold |
Preliminary Size: | 2181 |
Sequenced Size: | 1983 |
Gene | Date | Evidence |
---|---|---|
CG18870 | 2001-01-01 | Release 2 assignment |
CG18870 | 2002-06-01 | Blastp of sequenced clone |
CG18870 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18870 | 2008-04-29 | Release 5.5 accounting |
CG18870 | 2008-08-15 | Release 5.9 accounting |
CG18870 | 2008-12-18 | 5.12 accounting |
1983 bp (1983 high quality bases) assembled on 2002-06-01
GenBank Submission: AY118577
> LD43412.complete CAATAAACAAATTTCTAACTTATTTTGCAACAAATGCAAACGCTGAGAAT CTAGCTGGACACAGTCGCGTGGGAACAGCAAGGATACACGCAGGACGTGA GGACGCGCGAAAAGTCAGGTGCCGACATGTTGGTCAAGTGCTGCATCGGA TTTGGGTCACTCTGGCCACTGGCCATGATGGTGGCCTTTTGCACTGCCTA CAAGAACGTTCGTCTCCAGGACAACATGTGCTCGGACAAACTGTTCTACA CGCTGGCCAAGCCGTTCCGTGGCGATCCGACTGTGCGGCTGGAGTTCGAG GACACCTCCGGAGCGATCGTGACGCAGATGTGGAATTTGACACTGCCCCA CGGCCATACGGCCAACAAGATTAAGTACGATTGCCAGTTTAGGGTGGTGA CCAGCGAGCGACCGCGACGCGGCATTTACACTATCATTACGCGGCTTAAG TTTCGGCGCGACCCCGTTTCCAAGGAGTGCATCGACTACATTCAGTTCAG CAGCGGCAATCGCTCGCCCAGCGAACGCATTTGCACGGACATCTCCATTG ATGGCCCGGCGGGACGTCTGATCTTCGATCAGCGTGATCGCGACGTCAAC GTGCACATATTTATCGATCGATCGCGTCATATACTAGGCGATCCCCTGGA GCTGCGCATGGTGCTAACGGCACACTCGGAGTGCCAGTTTAATGGAGACT TCCTTTGCGAGCCCAACGACCAGTACTCGTGCATTTCGCGTCATTTTGTG CGGGACAATATCACCAATTGCCTGTATCCGTGCCGCGACGAGGGCACCTG CTTTCACGACGCCATTGTGCCGGAGATCGATACGGCCAATGTGGCTATAT CGGCGCTGACCTCGCTCATCTTTACCATGGTGGGCGTGGGTTTTTGTGTG TGGATCTGCTGGAAGTATTGGAACTGCATAACGGTGCAGCAACGGGCGCA CGAAGCCTCCGCTGCCCGCTTCAATCAGCGTCGAGTCAGATCGGATGTGC CCACCATTGAGCTGCCACCATCGGTGCACTACGATGATAGCGTCCTGCAC GAGCACGATACCCAGCAGCAACAGCAACCCGCCACGCCAAAGGATCTACC GCCCAGCTATGAGTCCCTGTTCCCGGAAAGATAAAGATCCGCGACGGGTG TCGCTCCGCTTTGTGCCAGATCAGCAAGTACTTGGTATCGCACACTTGTT GTATTAGTCCTATTAGGTAATTGTATCTCTATCTGAACCGTTCAGCAATC CATGTAAATATGTTAGGACTGATTTTATGTTTTGAGATTAGCATTAGCGA TCAAACATCTTTCTCGATGTGTTCACTTTGAACCAAATTCCAGAATACAC TCCCCGAGAATTTCCACAGTTTTACTGTTGTACATATATATAAGTTTTAT ATTGTTCCACTCTCCGTATTATTTGATTAACTGTATTGTAATTGTTAAAA GCGCCCTTTTGGCGAATGCAAATTGTTTACTCACTGATGAAATCTCACTG GTATTACCATACTCAATGAAATTATATCAATTATTTACCTAAGCATCAAT TATTTATAAGCAAAAGCGAAAGCCACACAGTACTAGTCTCTATATTAGCT AGCGTAAATATTCCAAGGGCCAGCCAAGACTGGGCCGAGCATTCCACATA GTTGTACCTGTTTCTGTACTGCATAGATATGTATATGTTATGTATTTGTA CGCATAGAATACCACGCGCTTGTAGATGTCATTGTTGTGTGCTGGCCGAA AGTGTCAATTGTTCAATTTCGAGTATAAGATGTAGGCGCATACGCTCACA AGATAATGTACGAACTACAGTATTTACTCCACACATGTAACTGCAATGTA ACTGAAAGTTCGGGCTAGTGGTCAGTAGGTCTTAAGCCAATTAACTCATA TGTATACACACGCAACTCACTCAAATACGTATATTAACTGATAAATAAAC CAACTAAATCTCAGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17501172..17502146 | 1965..991 | 4875 | 100 | Minus |
chr2R | 21145070 | chr2R | 17502214..17502996 | 990..208 | 3915 | 100 | Minus |
chr2R | 21145070 | chr2R | 17503055..17503262 | 208..1 | 1040 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21614762..21615737 | 1966..991 | 4880 | 100 | Minus |
2R | 25286936 | 2R | 21615805..21616587 | 990..208 | 3915 | 100 | Minus |
2R | 25286936 | 2R | 21616646..21616853 | 208..1 | 1040 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21615961..21616936 | 1966..991 | 4880 | 100 | Minus |
2R | 25260384 | 2R | 21617004..21617786 | 990..208 | 3915 | 100 | Minus |
2R | 25260384 | 2R | 21617845..21618052 | 208..1 | 1040 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\HeT-A | 5691 | Dyak\HeT-A YAKHETA 5691bp | 76..205 | 1485..1361 | 124 | 59.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17501172..17502146 | 991..1965 | 100 | <- | Minus |
chr2R | 17502214..17502995 | 209..990 | 100 | <- | Minus |
chr2R | 17503055..17503262 | 1..208 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18870-RA | 1..1008 | 127..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18870-RA | 1..1008 | 127..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18870-RA | 1..1008 | 127..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18870-RA | 1..1008 | 127..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18870-RA | 1..1008 | 127..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18870-RA | 41..2005 | 1..1965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18870-RA | 41..2005 | 1..1965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18870-RA | 55..2019 | 1..1965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18870-RA | 15..1979 | 1..1965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18870-RA | 55..2019 | 1..1965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21614763..21615737 | 991..1965 | 100 | <- | Minus |
2R | 21615805..21616586 | 209..990 | 100 | <- | Minus |
2R | 21616646..21616853 | 1..208 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21614763..21615737 | 991..1965 | 100 | <- | Minus |
2R | 21615805..21616586 | 209..990 | 100 | <- | Minus |
2R | 21616646..21616853 | 1..208 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21614763..21615737 | 991..1965 | 100 | <- | Minus |
2R | 21615805..21616586 | 209..990 | 100 | <- | Minus |
2R | 21616646..21616853 | 1..208 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17502268..17503242 | 991..1965 | 100 | <- | Minus |
arm_2R | 17503310..17504091 | 209..990 | 100 | <- | Minus |
arm_2R | 17504151..17504358 | 1..208 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21615962..21616936 | 991..1965 | 100 | <- | Minus |
2R | 21617004..21617785 | 209..990 | 100 | <- | Minus |
2R | 21617845..21618052 | 1..208 | 100 | Minus |
Translation from 126 to 1133
> LD43412.pep MLVKCCIGFGSLWPLAMMVAFCTAYKNVRLQDNMCSDKLFYTLAKPFRGD PTVRLEFEDTSGAIVTQMWNLTLPHGHTANKIKYDCQFRVVTSERPRRGI YTIITRLKFRRDPVSKECIDYIQFSSGNRSPSERICTDISIDGPAGRLIF DQRDRDVNVHIFIDRSRHILGDPLELRMVLTAHSECQFNGDFLCEPNDQY SCISRHFVRDNITNCLYPCRDEGTCFHDAIVPEIDTANVAISALTSLIFT MVGVGFCVWICWKYWNCITVQQRAHEASAARFNQRRVRSDVPTIELPPSV HYDDSVLHEHDTQQQQQPATPKDLPPSYESLFPER*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12086-PA | 332 | GF12086-PA | 1..332 | 2..335 | 1547 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20763-PA | 335 | GG20763-PA | 1..335 | 1..335 | 1764 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20048-PA | 356 | GH20048-PA | 8..356 | 11..335 | 1327 | 75.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18870-PB | 335 | CG18870-PB | 1..335 | 1..335 | 1824 | 100 | Plus |
CG18870-PA | 335 | CG18870-PA | 1..335 | 1..335 | 1824 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20457-PA | 345 | GI20457-PA | 1..345 | 2..335 | 1316 | 72.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17483-PA | 343 | GL17483-PA | 14..343 | 11..335 | 1463 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15108-PA | 343 | GA15108-PA | 14..343 | 11..335 | 1463 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15706-PA | 335 | GM15706-PA | 1..335 | 1..335 | 1779 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25184-PA | 335 | GD25184-PA | 1..335 | 1..335 | 1786 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22307-PA | 342 | GJ22307-PA | 8..342 | 11..335 | 1386 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22255-PA | 329 | GK22255-PA | 5..329 | 12..335 | 1373 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13695-PA | 335 | GE13695-PA | 1..335 | 1..335 | 1773 | 98.2 | Plus |
Translation from 126 to 1133
> LD43412.hyp MLVKCCIGFGSLWPLAMMVAFCTAYKNVRLQDNMCSDKLFYTLAKPFRGD PTVRLEFEDTSGAIVTQMWNLTLPHGHTANKIKYDCQFRVVTSERPRRGI YTIITRLKFRRDPVSKECIDYIQFSSGNRSPSERICTDISIDGPAGRLIF DQRDRDVNVHIFIDRSRHILGDPLELRMVLTAHSECQFNGDFLCEPNDQY SCISRHFVRDNITNCLYPCRDEGTCFHDAIVPEIDTANVAISALTSLIFT MVGVGFCVWICWKYWNCITVQQRAHEASAARFNQRRVRSDVPTIELPPSV HYDDSVLHEHDTQQQQQPATPKDLPPSYESLFPER*