Clone LD43457 Report

Search the DGRC for LD43457

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:434
Well:57
Vector:pOT2
Associated Gene/TranscriptCG30440-RA
Protein status:LD43457.pep: gold
Preliminary Size:3404
Sequenced Size:3441

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10412 2001-01-01 Release 2 assignment
CG10416 2001-01-01 Release 2 assignment
CG12183 2001-01-01 Release 2 assignment
CG30440 2001-07-04 Blastp of sequenced clone
CG30440 2003-01-01 Sim4 clustering to Release 3
CG30440 2008-04-29 Release 5.5 accounting
CG30440 2008-08-15 Release 5.9 accounting
CG30440 2008-12-18 5.12 accounting

Clone Sequence Records

LD43457.complete Sequence

3441 bp (3441 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051968

> LD43457.complete
AGCAACTACATTGCGTCGCGTCGGAATGTTTTTGGCCTCAGAGGCGAGTG
CCTGGCTTCAACAAAATAAACCGCATTCGATTTTGTTAAAATAAATGTGC
AAAAGAAACCAGCTTCTCTATGTGAAAAGAACAAATGCACCAGCTTTGTA
AAAATGTTACAAGAAAATAATTAGTAACAAGCCAGGCGCCAAAACACTTT
TTATTGTATCACAAACTATTTGACCAAAATATGTCTGCTCCCAAGATGCA
AATACACCCCACAAAGATGGAAGAAGATTCAGATACCCGTAACAGTACCT
ATGTACCCAAAATGGAACTTCTTATGACCCATTATATACACGAAGGCAAG
AAAGCTATTATGTACAGGTCGAGCGAGCCACAGATCGCTGCGCGTCGTAA
TAAAAAGACTCGTTTTGTAGGAAACCGCCGACAACTAAGAAATCTTTCTC
AACCCGAGAATAGCCATAAAACCAGTCGAAGTCTCTGCCCAGATACCGCT
AAGACTGAACCAAAAGTTTATTCTTTGCGATTTGTCTTGAACAAAAGTGA
AGACAAGGACTATATGTCAAGGCTCAAGGCGCAGAACGATTTCTCACAAT
CCTCTTGCCTTTGCAACAATCTAAGCCATGCCAACACAGAGGCTGGTGCT
TATCAAAATGATGGTATCTTAAAAGGCCAGCGTGACCATTCGGATTTTTT
GACTGCGGCTGGCGGAATTCAATCGCGAGCAGATCGCATCGCACGCATTG
AGACCTGCGGAATTAGAACCACCCATCTACAACCAGAGACCCAAATTCTT
AAGCCGGTAACGGAACCTAACGAAACTCGCTTCGATCAACATTCTCCAGA
CTGGCTATTTAAAAACTCAAGAATTGGAGACGTCAGTAACAGCAGTAAAT
TAAGCGCTTGTAACTCCGAGTTGCCTCCCGAAGAATATAAGGGGAGAACT
CTATACCATGACACAAAGTTTGATTGTGCGTATATAAAAAATCGTCGACC
GCTGATAACCACTGAGAGCAAGATGTCCATTACAGAAGCAGAACATCCCC
AGACCAAATATACCGATATAAAGTACGACTACAAAACTTGTTCGATTTCC
CAAGGCTTACATCAGAACAAAGCATTTCTTAATAAAGTTCCTCCTAGCAA
GCAAAGCAAACCTTTCCACAGCGTAGATTATGATTATTACGAAAATATTC
AAAAACTGCATCTGAGCAAGGAATCTGAAAGACAAATAAGGGACAATGGG
GACCCAAACGATTTGCAGAACTTTTTAAAAAAGAATTTAATTAAGGCTAC
AACCAATGAATTGCTTAAAGCTGCCGCGCAAAGCACAAAAAAGTGTAACA
TTGACTTAGAGCGCAAGTTAAATGATCTGAATATAAAAGAAGAGGATCAC
ACTTCCAATGACAGCGGAAACTCATACAAGAACGATCCCTATCTAGTATC
TATGAGCAAAATTAATTCTTGTAAATTTATCAGATCATATAATAGAGATT
GTGAAACTATTTTTCCCACTGGTGACCACAGTGACCTAAATGAATTTAGA
AAGTCTTTTATGCCACAATCCGTTGATTTATTATCAAGCGCTTCTGTTTC
GTTGTCTAGTTGCGATGGGTCTTGCCTAAACAAAGATTCTATTTGCGGTT
CAGAAGAAGATTGCTGCGAATGTAATGAATACCAATGTATCGCAACTCCG
CCAAACGAACTTTCCAAGGATTGCCTAAATGCAGTTGAAGAAGGTGTTTT
TTGTAACACGGAGTATGATGACTTTCATGAAAACTTAACATCAAGCTGTT
GCTGCAGCGGGTCTTTTTGTGATGACGATGGTTGTTCATACTTGGATGAA
GGTTTAAGCGTTGACATAAAATCCAAAAACGTACAAAGCCTGCACGAGAG
CGGAACAGATGAAAAACTTTCACGGAAAACCATTCTTCTGGCAAGGACTG
AGGATACAAATGATGTAACACAAGGAATCAGCGATGGCACCACTTACTTC
ACTGGCTCTTTAAATATAACACATCTTCCAAAATCCAATGAAATATTTAA
AAAACCGCAGGACCCAGAAATGCAACGACACAGACGTGGTCATATTTTAA
AGGAACTTTTTGAAACGGAGAAAATCTACGTTAATGAAATAGCGTCAATC
TTAAAGGGCTACTATGATCGCTTGAAATCGGATGAAAGTGCTCCTGCCAG
TCTGCAAGGTAAAGCGAATGTGCTGTTCGGAAACCTTAATGAGATCTACT
CATTCCATAATGATGTTTTTCTTAAGGATCTTGAAAACTGTATATCCGTC
ACTGAACGCGTTGCATTATGCTTTGTTAAAAGGCGTGACAAATTTTATCA
ATTATACTCATTTTATTGTCAAAATATACAACGCTCAGAGAAATTACGTG
AAACCTTAGTGGATACTCATATGTTCTTCAAAGAATGTCAAATAGGACTT
GGTCATAAACTTCCTCTGGGTGCATATTTGCTTAAGCCAGTTCAAAGAAT
TACAAAGTACCAACTTCTTTTAAAGGACTTGCTGCTCTTCACTGACAACG
ATAGCTGCAGAAATGAACTTAAAAATGCACTGGACTGTATGTTAATCGTT
TTGAAGTGCGTAAACGATTCGATGCACCAAATTTCAATAACAGGGTTTTC
GGGTGATTTAGCGAAACAGGGTGAACTTTTGATGCAAGACTCATTCCAGG
TGTGGATAGAGTCTAAAAAGGACATTCGTCTTCGAATGAAGCCAAAACGG
CGGCATATCTTTTTATATCAAAAGTCTTTGCTGCTTTGTAAGCAAACATC
AAAATCGGGATATAACAAAAGCAGTTATCAATTTAAAAGCGATGTAAAGA
TGTCTCAAATTGGCTTAACAGAGTCCGTAAGCGGCGATGCAAAACGATTT
GAAGTTTGGCTCAAAGGGCGCCAGGAAGTTTATACGTTGCAAGCATCGAC
AATCGGTGTAAAAGAAATGTGGGTTGCCGAGATTAAAAGGGTGCTATTTA
ACCAACTCGAAAAGCTCAAAGGCGATCAAATAGCGAGGTACAACATACGG
CATCAAAGCCTATGGCAAAAAAGTTCTTGTGAAGCCCCCAACATTACCCA
CTGTTCATTGAGGCGCACGGAATGCTTTGAATTGCCTCTTAATGATTCCA
ACCGGAATACGAATATCAGAAGCGAGAAAACGTGCTTATCAGATCAAAAT
ATTGTAAATGGTCCATCTGTTCAGGATCAACACGAAAAAAACAGTTGGAG
CTCTGATTGTTCCGACATTGATGAAGATGAAACAATTAACCCGATACTAA
TGCAGAAGACTGGACAACCGAAACTTTTATGGAACCGATCAAGTAGTCAT
CAAGTCTTTATTAAAAGCAAATACATCTTAAGTAGAAAGACTGTAAACAA
TTAAAACTTTAAAGTATCAAAAAAAAAAAAAAAAAAAAAAA

LD43457.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:28:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG30440.a 4794 CG30440.a 72..3491 1..3420 17100 100 Plus
CG30440-RA 3809 CG30440-RA 113..3532 1..3420 17100 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 1381286..1383231 1946..1 9685 99.8 Minus
chr2R 21145070 chr2R 1362026..1362471 3293..2848 2230 100 Minus
chr2R 21145070 chr2R 1371478..1371797 2652..2333 1600 100 Minus
chr2R 21145070 chr2R 1371214..1371412 2849..2651 995 100 Minus
chr2R 21145070 chr2R 1371848..1372026 2333..2155 895 100 Minus
chr2R 21145070 chr2R 1355706..1355831 3418..3293 630 100 Minus
chr2R 21145070 chr2R 1379394..1379509 2061..1946 580 100 Minus
chr2R 21145070 chr2R 1373242..1373340 2157..2059 495 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:38:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:41:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 5493891..5495836 1946..1 9730 100 Minus
2R 25286936 2R 5474665..5475110 3293..2848 2230 100 Minus
2R 25286936 2R 5484107..5484426 2652..2333 1600 100 Minus
2R 25286936 2R 5483843..5484041 2849..2651 995 100 Minus
2R 25286936 2R 5484477..5484655 2333..2155 895 100 Minus
2R 25286936 2R 5468317..5468444 3420..3293 640 100 Minus
2R 25286936 2R 5491999..5492114 2061..1946 580 100 Minus
2R 25286936 2R 5485870..5485968 2157..2059 495 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 5495090..5497035 1946..1 9730 100 Minus
2R 25260384 2R 5475864..5476309 3293..2848 2230 100 Minus
2R 25260384 2R 5485306..5485625 2652..2333 1600 100 Minus
2R 25260384 2R 5485042..5485240 2849..2651 995 100 Minus
2R 25260384 2R 5485676..5485854 2333..2155 895 100 Minus
2R 25260384 2R 5469516..5469643 3420..3293 640 100 Minus
2R 25260384 2R 5493198..5493313 2061..1946 580 100 Minus
2R 25260384 2R 5487069..5487167 2157..2059 495 100 Minus
Blast to na_te.dros performed 2019-03-16 20:41:49
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy10 6006 gypsy10 GYPSY10 6006bp 733..795 3352..3417 151 74.2 Plus
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 4138..4182 63..108 119 76.1 Plus

LD43457.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:42:29 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 1371848..1372024 2157..2333 100 <- Minus
chr2R 1373243..1373338 2061..2156 100 <- Minus
chr2R 1379395..1379508 1947..2060 100 <- Minus
chr2R 1355706..1355830 3294..3418 100 <- Minus
chr2R 1362026..1362469 2850..3293 100 <- Minus
chr2R 1371214..1371411 2652..2849 100 <- Minus
chr2R 1371479..1371796 2334..2651 100 <- Minus
chr2R 1381286..1383231 1..1946 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:23:37 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
CG30440-RA 1..3174 231..3404 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:15:50 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
CG30440-RA 1..3174 231..3404 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:26:43 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
CG30440-RA 1..3174 231..3404 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:47:17 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
CG30440-RA 1..3174 231..3404 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:51:25 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
CG30440-RA 1..3174 231..3404 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:23:37 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
CG30440-RA 1..3418 1..3418 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:15:50 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
CG30440-RA 1..3418 1..3418 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:26:43 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
CG30440-RA 26..3443 1..3418 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:47:17 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
CG30440-RA 1..3418 1..3418 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:51:25 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
CG30440-RA 26..3443 1..3418 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:42:29 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5468319..5468443 3294..3418 100 <- Minus
2R 5474665..5475108 2850..3293 100 <- Minus
2R 5483843..5484040 2652..2849 100 <- Minus
2R 5484108..5484425 2334..2651 100 <- Minus
2R 5484477..5484653 2157..2333 100 <- Minus
2R 5485871..5485966 2061..2156 100 <- Minus
2R 5492000..5492113 1947..2060 100 <- Minus
2R 5493891..5495836 1..1946 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:42:29 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5468319..5468443 3294..3418 100 <- Minus
2R 5474665..5475108 2850..3293 100 <- Minus
2R 5483843..5484040 2652..2849 100 <- Minus
2R 5484108..5484425 2334..2651 100 <- Minus
2R 5484477..5484653 2157..2333 100 <- Minus
2R 5485871..5485966 2061..2156 100 <- Minus
2R 5492000..5492113 1947..2060 100 <- Minus
2R 5493891..5495836 1..1946 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:42:29 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5468319..5468443 3294..3418 100 <- Minus
2R 5474665..5475108 2850..3293 100 <- Minus
2R 5483843..5484040 2652..2849 100 <- Minus
2R 5484108..5484425 2334..2651 100 <- Minus
2R 5484477..5484653 2157..2333 100 <- Minus
2R 5485871..5485966 2061..2156 100 <- Minus
2R 5492000..5492113 1947..2060 100 <- Minus
2R 5493891..5495836 1..1946 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:26:43 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 1355824..1355948 3294..3418 100 <- Minus
arm_2R 1362170..1362613 2850..3293 100 <- Minus
arm_2R 1371348..1371545 2652..2849 100 <- Minus
arm_2R 1371613..1371930 2334..2651 100 <- Minus
arm_2R 1371982..1372158 2157..2333 100 <- Minus
arm_2R 1373376..1373471 2061..2156 100 <- Minus
arm_2R 1379505..1379618 1947..2060 100 <- Minus
arm_2R 1381396..1383341 1..1946 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:25:13 Download gff for LD43457.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5469518..5469642 3294..3418 100 <- Minus
2R 5475864..5476307 2850..3293 100 <- Minus
2R 5485042..5485239 2652..2849 100 <- Minus
2R 5485307..5485624 2334..2651 100 <- Minus
2R 5485676..5485852 2157..2333 100 <- Minus
2R 5487070..5487165 2061..2156 100 <- Minus
2R 5493199..5493312 1947..2060 100 <- Minus
2R 5495090..5497035 1..1946 100   Minus

LD43457.pep Sequence

Translation from 230 to 3403

> LD43457.pep
MSAPKMQIHPTKMEEDSDTRNSTYVPKMELLMTHYIHEGKKAIMYRSSEP
QIAARRNKKTRFVGNRRQLRNLSQPENSHKTSRSLCPDTAKTEPKVYSLR
FVLNKSEDKDYMSRLKAQNDFSQSSCLCNNLSHANTEAGAYQNDGILKGQ
RDHSDFLTAAGGIQSRADRIARIETCGIRTTHLQPETQILKPVTEPNETR
FDQHSPDWLFKNSRIGDVSNSSKLSACNSELPPEEYKGRTLYHDTKFDCA
YIKNRRPLITTESKMSITEAEHPQTKYTDIKYDYKTCSISQGLHQNKAFL
NKVPPSKQSKPFHSVDYDYYENIQKLHLSKESERQIRDNGDPNDLQNFLK
KNLIKATTNELLKAAAQSTKKCNIDLERKLNDLNIKEEDHTSNDSGNSYK
NDPYLVSMSKINSCKFIRSYNRDCETIFPTGDHSDLNEFRKSFMPQSVDL
LSSASVSLSSCDGSCLNKDSICGSEEDCCECNEYQCIATPPNELSKDCLN
AVEEGVFCNTEYDDFHENLTSSCCCSGSFCDDDGCSYLDEGLSVDIKSKN
VQSLHESGTDEKLSRKTILLARTEDTNDVTQGISDGTTYFTGSLNITHLP
KSNEIFKKPQDPEMQRHRRGHILKELFETEKIYVNEIASILKGYYDRLKS
DESAPASLQGKANVLFGNLNEIYSFHNDVFLKDLENCISVTERVALCFVK
RRDKFYQLYSFYCQNIQRSEKLRETLVDTHMFFKECQIGLGHKLPLGAYL
LKPVQRITKYQLLLKDLLLFTDNDSCRNELKNALDCMLIVLKCVNDSMHQ
ISITGFSGDLAKQGELLMQDSFQVWIESKKDIRLRMKPKRRHIFLYQKSL
LLCKQTSKSGYNKSSYQFKSDVKMSQIGLTESVSGDAKRFEVWLKGRQEV
YTLQASTIGVKEMWVAEIKRVLFNQLEKLKGDQIARYNIRHQSLWQKSSC
EAPNITHCSLRRTECFELPLNDSNRNTNIRSEKTCLSDQNIVNGPSVQDQ
HEKNSWSSDCSDIDEDETINPILMQKTGQPKLLWNRSSSHQVFIKSKYIL
SRKTVNN*

LD43457.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:16:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13845-PA 485 GF13845-PA 44..466 596..1020 1367 62.4 Plus
Dana\GF10082-PA 2260 GF10082-PA 1286..1583 618..922 522 38.2 Plus
Dana\GF19847-PA 615 GF19847-PA 40..582 25..557 402 28.2 Plus
Dana\GF10654-PA 1850 GF10654-PA 1302..1610 622..928 386 32.1 Plus
Dana\GF10082-PA 2260 GF10082-PA 1937..2207 618..892 333 31 Plus
Dana\GF12043-PA 4212 GF12043-PA 86..333 618..874 222 29.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:16:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10861-PA 1045 GG10861-PA 1..1045 1..1057 4253 78.9 Plus
Dere\GG14629-PA 1642 GG14629-PA 1283..1580 618..922 513 38.2 Plus
Dere\GG14443-PA 1898 GG14443-PA 1329..1657 599..928 386 31.9 Plus
Dere\GG14630-PA 815 GG14630-PA 493..763 618..892 336 30.9 Plus
Dere\GG20966-PA 1566 GG20966-PA 562..855 625..927 252 28.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:16:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21435-PA 1540 GH21435-PA 1087..1472 643..1020 1294 65 Plus
Dgri\GH15671-PA 2316 GH15671-PA 1313..1610 618..922 518 37.9 Plus
Dgri\GH14899-PA 1957 GH14899-PA 1411..1719 622..928 377 31.3 Plus
Dgri\GH21435-PA 1540 GH21435-PA 425..731 341..642 361 35.6 Plus
Dgri\GH15671-PA 2316 GH15671-PA 1996..2303 618..925 294 28.1 Plus
Dgri\GH21609-PA 1483 GH21609-PA 554..847 625..927 250 28.5 Plus
Dgri\GH21704-PA 4234 GH21704-PA 98..341 622..874 222 29 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG30440-PA 1057 CG30440-PA 1..1057 1..1057 5584 100 Plus
trio-PC 2263 CG18214-PC 1240..1580 584..922 516 36.5 Plus
trio-PA 2263 CG18214-PA 1240..1580 584..922 516 36.5 Plus
Pura-PC 872 CG33275-PC 219..636 525..935 392 29.2 Plus
Pura-PB 1428 CG33275-PB 775..1192 525..935 392 29.2 Plus
Pura-PD 1898 CG33275-PD 1245..1662 525..935 392 29.2 Plus
Pura-PA 1904 CG33275-PA 1251..1668 525..935 392 29.2 Plus
trio-PC 2263 CG18214-PC 1941..2211 618..892 326 30.9 Plus
trio-PA 2263 CG18214-PA 1941..2211 618..892 326 30.9 Plus
trio-PE 398 CG18214-PE 76..346 618..892 326 30.9 Plus
trio-PF 658 CG18214-PF 336..606 618..892 326 30.9 Plus
trio-PB 658 CG18214-PB 336..606 618..892 326 30.9 Plus
trio-PD 804 CG18214-PD 482..752 618..892 326 30.9 Plus
GEFmeso-PG 1237 CG30115-PG 236..634 625..1026 246 24.2 Plus
GEFmeso-PE 1549 CG30115-PE 548..946 625..1026 246 24.2 Plus
GEFmeso-PF 878 CG30115-PF 548..841 625..927 237 26.6 Plus
Unc-89-PH 3903 CG33519-PH 86..352 618..895 224 27.2 Plus
Unc-89-PE 4193 CG33519-PE 86..352 618..895 224 27.2 Plus
Unc-89-PD 4194 CG33519-PD 87..353 618..895 224 27.2 Plus
Unc-89-PC 4218 CG33519-PC 86..352 618..895 224 27.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:16:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20658-PA 1642 GI20658-PA 1175..1560 643..1020 1305 65.8 Plus
Dmoj\GI12715-PA 2277 GI12715-PA 1277..1574 618..922 524 38.5 Plus
Dmoj\GI12875-PA 888 GI12875-PA 334..649 622..935 377 31 Plus
Dmoj\GI20658-PA 1642 GI20658-PA 424..753 335..642 360 36.2 Plus
Dmoj\GI12715-PA 2277 GI12715-PA 1958..2216 618..879 301 29.3 Plus
Dmoj\GI19581-PA 1614 GI19581-PA 581..874 625..927 265 29.2 Plus
Dmoj\GI24148-PA 509 GI24148-PA 46..312 608..855 173 26.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:16:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11040-PA 1315 GL11040-PA 1..1049 28..1017 1801 43.2 Plus
Dper\GL16679-PA 1688 GL16679-PA 1287..1602 602..922 507 36.4 Plus
Dper\GL26580-PA 912 GL26580-PA 350..658 622..928 393 32.4 Plus
Dper\GL16680-PA 847 GL16680-PA 524..831 618..925 339 29.8 Plus
Dper\GL17446-PA 1533 GL17446-PA 613..750 625..764 220 37.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:16:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15847-PA 1048 GA15847-PA 355..1011 335..1017 1626 52.1 Plus
Dpse\GA28275-PA 2398 GA28275-PA 1232..1529 618..922 512 37.3 Plus
Dpse\GA23678-PA 862 GA23678-PA 278..606 599..928 393 32.3 Plus
Dpse\GA28275-PA 2398 GA28275-PA 2075..2345 618..892 333 30.9 Plus
Dpse\GA15660-PB 1632 GA15660-PB 582..875 625..927 252 28 Plus
Dpse\GA24366-PA 4190 GA24366-PA 90..333 622..874 202 28 Plus
Dpse\GA15847-PA 1048 GA15847-PA 1..277 28..290 165 27.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:16:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16509-PA 1038 GM16509-PA 1..1012 1..1022 4709 89.9 Plus
Dsec\GM14862-PA 1394 GM14862-PA 823..1151 599..928 391 32.2 Plus
Dsec\GM14245-PA 812 GM14245-PA 490..760 618..892 343 31.2 Plus
Dsec\GM14244-PA 227 GM14244-PA 3..217 692..913 325 39.2 Plus
Dsec\GM13735-PA 90 GM13735-PA 1..60 818..877 305 96.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10359-PA 318 GD10359-PA 1..292 731..1022 1416 93.2 Plus
Dsim\GD13501-PA 812 GD13501-PA 490..760 618..892 336 30.9 Plus
Dsim\GD24982-PA 2043 GD24982-PA 86..353 618..896 225 27.5 Plus
Dsim\GD13500-PA 706 GD13500-PA 478..603 795..922 193 33.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20407-PA 1626 GJ20407-PA 1161..1544 643..1020 1315 66.4 Plus
Dvir\GJ12702-PA 323 GJ12702-PA 1..260 623..893 469 39.5 Plus
Dvir\GJ20407-PA 1626 GJ20407-PA 424..730 335..642 389 38.7 Plus
Dvir\GJ13016-PA 1670 GJ13016-PA 1097..1405 622..928 375 31.3 Plus
Dvir\GJ12704-PA 539 GJ12704-PA 220..485 618..886 333 30.7 Plus
Dvir\GJ21156-PA 1582 GJ21156-PA 541..834 625..927 255 28.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:16:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10622-PA 1533 GK10622-PA 1066..1463 627..1017 1321 65.9 Plus
Dwil\GK16864-PA 2277 GK16864-PA 1284..1582 618..922 509 38.1 Plus
Dwil\GK10622-PA 1533 GK10622-PA 39..746 25..668 506 30.8 Plus
Dwil\GK17395-PA 1990 GK17395-PA 1414..1722 622..928 390 32.1 Plus
Dwil\GK16864-PA 2277 GK16864-PA 1952..2226 613..892 338 30.3 Plus
Dwil\GK19539-PA 1520 GK19539-PA 543..836 625..927 251 28.2 Plus
Dwil\GK21935-PA 4238 GK21935-PA 86..352 618..895 229 28.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11297-PA 994 GE11297-PA 1..994 1..1049 3789 73.8 Plus
Dyak\GE20987-PA 1639 GE20987-PA 1283..1580 618..922 517 38.2 Plus
Dyak\GE21634-PA 1902 GE21634-PA 1331..1659 599..928 387 31.9 Plus
Dyak\GE20988-PA 815 GE20988-PA 493..763 618..892 338 30.9 Plus
Dyak\GE13907-PA 1598 GE13907-PA 597..890 625..927 252 28.1 Plus

LD43457.hyp Sequence

Translation from 230 to 3403

> LD43457.hyp
MSAPKMQIHPTKMEEDSDTRNSTYVPKMELLMTHYIHEGKKAIMYRSSEP
QIAARRNKKTRFVGNRRQLRNLSQPENSHKTSRSLCPDTAKTEPKVYSLR
FVLNKSEDKDYMSRLKAQNDFSQSSCLCNNLSHANTEAGAYQNDGILKGQ
RDHSDFLTAAGGIQSRADRIARIETCGIRTTHLQPETQILKPVTEPNETR
FDQHSPDWLFKNSRIGDVSNSSKLSACNSELPPEEYKGRTLYHDTKFDCA
YIKNRRPLITTESKMSITEAEHPQTKYTDIKYDYKTCSISQGLHQNKAFL
NKVPPSKQSKPFHSVDYDYYENIQKLHLSKESERQIRDNGDPNDLQNFLK
KNLIKATTNELLKAAAQSTKKCNIDLERKLNDLNIKEEDHTSNDSGNSYK
NDPYLVSMSKINSCKFIRSYNRDCETIFPTGDHSDLNEFRKSFMPQSVDL
LSSASVSLSSCDGSCLNKDSICGSEEDCCECNEYQCIATPPNELSKDCLN
AVEEGVFCNTEYDDFHENLTSSCCCSGSFCDDDGCSYLDEGLSVDIKSKN
VQSLHESGTDEKLSRKTILLARTEDTNDVTQGISDGTTYFTGSLNITHLP
KSNEIFKKPQDPEMQRHRRGHILKELFETEKIYVNEIASILKGYYDRLKS
DESAPASLQGKANVLFGNLNEIYSFHNDVFLKDLENCISVTERVALCFVK
RRDKFYQLYSFYCQNIQRSEKLRETLVDTHMFFKECQIGLGHKLPLGAYL
LKPVQRITKYQLLLKDLLLFTDNDSCRNELKNALDCMLIVLKCVNDSMHQ
ISITGFSGDLAKQGELLMQDSFQVWIESKKDIRLRMKPKRRHIFLYQKSL
LLCKQTSKSGYNKSSYQFKSDVKMSQIGLTESVSGDAKRFEVWLKGRQEV
YTLQASTIGVKEMWVAEIKRVLFNQLEKLKGDQIARYNIRHQSLWQKSSC
EAPNITHCSLRRTECFELPLNDSNRNTNIRSEKTCLSDQNIVNGPSVQDQ
HEKNSWSSDCSDIDEDETINPILMQKTGQPKLLWNRSSSHQVFIKSKYIL
SRKTVNN*

LD43457.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:17:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG30440-PA 1057 CG30440-PA 1..1057 1..1057 5584 100 Plus
trio-PC 2263 CG18214-PC 1240..1580 584..922 516 36.5 Plus
trio-PA 2263 CG18214-PA 1240..1580 584..922 516 36.5 Plus
CG33275-PC 872 CG33275-PC 219..636 525..935 392 29.2 Plus
CG33275-PB 1428 CG33275-PB 775..1192 525..935 392 29.2 Plus
trio-PC 2263 CG18214-PC 1941..2211 618..892 326 30.9 Plus
trio-PA 2263 CG18214-PA 1941..2211 618..892 326 30.9 Plus