BDGP Sequence Production Resources |
Search the DGRC for LD43495
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 434 |
Well: | 95 |
Vector: | pOT2 |
Associated Gene/Transcript | Hem-RA |
Protein status: | LD43495.pep: gold |
Preliminary Size: | 3613 |
Sequenced Size: | 3782 |
Gene | Date | Evidence |
---|---|---|
CG5837 | 2001-01-01 | Release 2 assignment |
CG5837 | 2002-05-17 | Blastp of sequenced clone |
CG5837 | 2003-01-01 | Sim4 clustering to Release 3 |
Hem | 2008-04-29 | Release 5.5 accounting |
Hem | 2008-08-15 | Release 5.9 accounting |
Hem | 2008-12-18 | 5.12 accounting |
3782 bp (3782 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118579
> LD43495.complete CGAAAACAAGAGGAAGAGTAATGTGTACACTTTTGTGTCGCTCCTTTTCG GCCAATTTAACAAACGAAAAAGTATAAGTACTGGGCAAATCAGCACTTGC ACGCCTCCCAATACGTCTCGCCAGCGCACACCTGTGTTCTGGGCTCCACC GGAAACTCGCCTTCAGCCATTCGACGTCGCCAACAGTCATCGGATATGGC ACGCCCAATTTTTCCGAACCAGCAGAAGATAGCTGAGAAACTAATCATCT TGAATGACCGCGGCCTGGGCATTCTTACGCGGATATACAACATCAAGAAA GCATGCGGCGACACCAAGTCGAAGCCAGGCTTCCTCTCCGAGAAGTCGTT GGAATCGAGCATCAAGTTTATCGTGAAGCGGTTCCCCAACATCGACGTCA AAGGGCTCAATGCTATTGTAAACATCAAAGCGGAGATTATTAAGTCGCTG TCCCTGTATTACCACACATTCGTGGACCTACTTGATTTCAAGGACAATGT ATGCGAACTGCTCACCACGATGGACGCCTGCCAGATTCACCTGGACATCA CATTGAACTTCGAGCTGACCAAATATTATCTGGACTTGGTTGTGACCTAC GTGTCCTTGATGATTGTTTTGTCTAGGGTCGAGGACCGCAAGGCAGTTCT GGGCTTGTACAATGCCGCCTACGAGCTGCAAAACAATCAGGCGGACACGG GCTTCCCCCGCTTGGGGCAGATGATTCTGGACTACGAGGTCCCCTTAAAA AAGTTGGCCGAGGAATTCATTCCCCACCAGCGCCTGCTAACCAGTGCGTT GCGGTCGCTGACCTCCATCTATGCACTGCGAAACCTGCCAGCAGACAAGT GGAGGGAAATGCAAAAGTTGAGTCTGGTAGGCAATCCGGCCATTCTTCTT AAGGCCGTCCGCACTGACACCATGTCCTGCGAGTACATATCCCTGGAGGC AATGGACCGCTGGATAATCTTTGGCTTGCTGCTGAACCATCAAATGCTCG GACAGTACCCGGAAGTCAACAAAATCTGGCTCTCCGCCCTGGAGTCAAGC TGGGTTGTGGCCTTGTTCCGCGACGAGGTCCTGCAAATTCATCAATACAT TCAGGCTACTTTCGACGGAATTAAAGGTTACAGCAAGCGGATCGGAGAAG TAAAGGAAGCCTACAACACGGCGGTTCAAAAAGCTGCTTTAATGCATCGG GAGCGGCGCAAGTTTCTTCGAACAGCCTTGAAGGAGCTAGCTCTTATTAT GACCGACCAACCAGGCCTCCTGGGACCTAAGGCAATATTCATTTTCATCG GTCTTTGTCTTGCGCGCGATGAGATTCTATGGCTCCTCAGGCATAATGAC AACCCACCTCTTCTCAAAAATAAAGGAAAGAGCAATGAAGATCTTGTAGA CCGACAGCTGCCGGAGCTCTTATTCCACATGGAGGAACTCCGCGCTCTTG TGCGTAAATACAGCCAGGTAATGCAGCGATATTACGTGCAATACTTGTCC GGATTCGATGCCACGGATCTTAATATTCGAATGCAAAGTCTGCAAATGTG TCCAGAAGACGAAAGCATAATCTTCAGTTCGCTCTACAACACGGCTGCAG CCCTGACAGTTAAGCAGGTGGAAGACAACGAACTCTTTTATTTCCGACCA TTCCGCCTGGACTGGTTCCGCCTCCAAACGTACATGAGTGTGGGAAAGGC TGCACTTAGGATCGCAGAGCATGCAGAGCTGGCCCGCCTACTGGATTCAA TGGTTTTCCACACTAGGGTGGTAGATAACTTGGACGAAATACTAGTAGAA ACCTCGGATCTCAGTATCTTCTGTTTCTATAACAAAATGTTTGACGACCA ATTCCACATGTGCTTGGAGTTTCCCGCGCAGAACCGCTACATCATAGCGT TTCCCTTAATCTGCAGCCACTTCCAAAATTGTACGCACGAAATGTGCCCG GAGGAGCGACACCATATACGTGAAAGGTCTCTCAGCGTGGTAAATATATT TCTTGAGGAAATGGCTAAGGAGGCTAAAAACATTATAACCACAATTTGCG ATGAGCAGTGCACAATGGCAGACGCTCTATTGCCAAAACACTGTGCTAAG ATTCTTTCCGTACAATCTGCTCGTAAGAAGAAGGACAAATCGAAGTCTAA GCATTTTGACGACATACGAAAGCCGGGAGACGAGTCGTACCGAAAGACAC GAGAGGATCTGACGACGATGGACAAGTTGCACATGGCCCTGACGGAGCTT TGTTTTGCAATCAATTATTGCCCCACGGTCAACGTTTGGGAGTTTGCTTT TGCCCCTCGCGAGTATCTCTGTCAGAACCTGGAACACCGCTTTTCCCGGG ATCTTGTTGGCATGGTGATGTTCAACCAGGAGACAATGGAGATAGCCAAG CCCTCGGAGCTGCTGGCCAGCGTTCGAGCCTACATGAACGTGCTGCAGAC AGTAGAGAACTACGTGCACATAGACATAACACGAGTTTTCAACAACTGCC TGTTGCAGCAAACACAGGCTTTAGACTCTCATGGCGAGAAAACCATTGCC GCTTTGTACAACACCTGGTACAGTGAGGTTCTGCTAAGGCGTGTCTCCGC TGGCAACATTGTGTTCTCCATTAACCAAAAGGCTTTTGTTCCCATTTCGC CCGAGGGCTGGGTACCATTTAACCCGCAGGAATTCTCTGATCTCAACGAG CTGCGAGCACTTGCAGAACTTGTGGGACCTTACGGTATCAAAACATTGAA CGAAACACTTATGTGGCACATAGCAAACCAGGTGCAAGAGTTGAAGTCGC TGGTGAGCACCAACAAGGAAGTGCTCATTACACTGCGAACCAGTTTTGAC AAACCTGAAGTGATGAAGGAGCAATTTAAGCGCTTACAGGACGTGGACCG CGTGCTGCAACGCATGACGATCATTGGTGTGATCATATGTTTCCGCAACC TGGTGCATGAAGCCCTCGTTGATGTGCTGGACAAGCGCATACCCTTCCTG CTTAGCTCAGTGAAGGACTTTCAGGAACATTTGCCCGGAGGCGACCAAAT TAGGGTTGCTTCCGAGATGGCCTCAGCAGCGGGTCTGCTATGCAAGGTAG ACCCCACATTAGCAACTACACTGAAATCAAAAAAGCCAGAATTCGATGAG GGTGAGCACCTCACTGCCTGTCTACTGATGGTCTTTGTGGCAGTGTCTAT ACCAAAACTGGCCCGTAACGAAAATTCCTTCTACAGAGCCACAATTGATG GCCACTCAAATAACACGCACTGCATGGCGGCGGCCATTAATAACATCTTC GGAGCCCTGTTTACCATCTGCGGTCAAAGTGACATGGAGGACCGCATGAA AGAGTTCCTTGCTCTGGCCAGTTCTTCCCTACTGCGCTTGGGCCAGGAGT CCGACAAAGAGGCGACACGGAACCGAGAGTCCATCTATTTGCTGCTGGAC GAAATCGTCAAACAATCGCCCTTCCTCACAATGGATCTGCTTGAGTCCTG CTTTCCCTACGTGCTTATACGCAACGCGTACCATGGCGTATACAAGCAGG AACAGATCTTAGGGCTGGCACTCTAAATGGAGCCGATCTGTGTATTCCAC ATAATGCTTATGTAGTTTATCCGCCGATCGACTATCGATCACTATGCTAA TCTAACATACTTTAAAACTGTTAAACATACCCAAATGTATTCTAGACTCT GCATTTTTATACTCGTACGACTTCGAATAAAGTGCTTATACAACCCAAAT AAGTATCCCACATTAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 22273269..22275657 | 1376..3764 | 100 | <- | Minus |
chr3L | 22275723..22277097 | 1..1375 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hem-RA | 1..3381 | 196..3576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hem-RA | 1..3381 | 196..3576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hem-RA | 1..3381 | 196..3576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hem-RA | 1..3381 | 196..3576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hem-RA | 1..3381 | 196..3576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hem-RA | 11..3774 | 1..3764 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hem-RA | 18..3781 | 1..3764 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hem-RA | 14..3777 | 1..3764 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hem-RA | 11..3774 | 1..3764 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hem-RA | 14..3777 | 1..3764 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22284354..22286742 | 1376..3764 | 100 | <- | Minus |
3L | 22286808..22288182 | 1..1375 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22284354..22286742 | 1376..3764 | 100 | <- | Minus |
3L | 22286808..22288182 | 1..1375 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22284354..22286742 | 1376..3764 | 100 | <- | Minus |
3L | 22286808..22288182 | 1..1375 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 22277454..22279842 | 1376..3764 | 100 | <- | Minus |
arm_3L | 22279908..22281282 | 1..1375 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22277454..22279842 | 1376..3764 | 100 | <- | Minus |
3L | 22279908..22281282 | 1..1375 | 100 | Minus |
Translation from 195 to 3575
> LD43495.pep MARPIFPNQQKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEK SLESSIKFIVKRFPNIDVKGLNAIVNIKAEIIKSLSLYYHTFVDLLDFKD NVCELLTTMDACQIHLDITLNFELTKYYLDLVVTYVSLMIVLSRVEDRKA VLGLYNAAYELQNNQADTGFPRLGQMILDYEVPLKKLAEEFIPHQRLLTS ALRSLTSIYALRNLPADKWREMQKLSLVGNPAILLKAVRTDTMSCEYISL EAMDRWIIFGLLLNHQMLGQYPEVNKIWLSALESSWVVALFRDEVLQIHQ YIQATFDGIKGYSKRIGEVKEAYNTAVQKAALMHRERRKFLRTALKELAL IMTDQPGLLGPKAIFIFIGLCLARDEILWLLRHNDNPPLLKNKGKSNEDL VDRQLPELLFHMEELRALVRKYSQVMQRYYVQYLSGFDATDLNIRMQSLQ MCPEDESIIFSSLYNTAAALTVKQVEDNELFYFRPFRLDWFRLQTYMSVG KAALRIAEHAELARLLDSMVFHTRVVDNLDEILVETSDLSIFCFYNKMFD DQFHMCLEFPAQNRYIIAFPLICSHFQNCTHEMCPEERHHIRERSLSVVN IFLEEMAKEAKNIITTICDEQCTMADALLPKHCAKILSVQSARKKKDKSK SKHFDDIRKPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEF AFAPREYLCQNLEHRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVL QTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYNTWYSEVLLRRV SAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGPYGIKT LNETLMWHIANQVQELKSLVSTNKEVLITLRTSFDKPEVMKEQFKRLQDV DRVLQRMTIIGVIICFRNLVHEALVDVLDKRIPFLLSSVKDFQEHLPGGD QIRVASEMASAAGLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMVFVAV SIPKLARNENSFYRATIDGHSNNTHCMAAAINNIFGALFTICGQSDMEDR MKEFLALASSSLLRLGQESDKEATRNRESIYLLLDEIVKQSPFLTMDLLE SCFPYVLIRNAYHGVYKQEQILGLAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23466-PA | 1126 | GF23466-PA | 1..1126 | 1..1126 | 5966 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13184-PA | 1126 | GG13184-PA | 1..1126 | 1..1126 | 6052 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14818-PA | 1126 | GH14818-PA | 1..1126 | 1..1126 | 5980 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hem-PA | 1126 | CG5837-PA | 1..1126 | 1..1126 | 5791 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13924-PA | 1126 | GI13924-PA | 1..1126 | 1..1126 | 5972 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20745-PA | 1124 | GL20745-PA | 1..1124 | 1..1124 | 5984 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19168-PA | 1124 | GA19168-PA | 1..1124 | 1..1124 | 5984 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22095-PA | 1126 | GM22095-PA | 1..1126 | 1..1126 | 6050 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Hem-PA | 1126 | GD12071-PA | 1..1126 | 1..1126 | 6057 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13713-PA | 1126 | GJ13713-PA | 1..1126 | 1..1126 | 5989 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17072-PA | 1126 | GK17072-PA | 1..1126 | 1..1126 | 5976 | 98.4 | Plus |
Translation from 195 to 3575
> LD43495.hyp MARPIFPNQQKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEK SLESSIKFIVKRFPNIDVKGLNAIVNIKAEIIKSLSLYYHTFVDLLDFKD NVCELLTTMDACQIHLDITLNFELTKYYLDLVVTYVSLMIVLSRVEDRKA VLGLYNAAYELQNNQADTGFPRLGQMILDYEVPLKKLAEEFIPHQRLLTS ALRSLTSIYALRNLPADKWREMQKLSLVGNPAILLKAVRTDTMSCEYISL EAMDRWIIFGLLLNHQMLGQYPEVNKIWLSALESSWVVALFRDEVLQIHQ YIQATFDGIKGYSKRIGEVKEAYNTAVQKAALMHRERRKFLRTALKELAL IMTDQPGLLGPKAIFIFIGLCLARDEILWLLRHNDNPPLLKNKGKSNEDL VDRQLPELLFHMEELRALVRKYSQVMQRYYVQYLSGFDATDLNIRMQSLQ MCPEDESIIFSSLYNTAAALTVKQVEDNELFYFRPFRLDWFRLQTYMSVG KAALRIAEHAELARLLDSMVFHTRVVDNLDEILVETSDLSIFCFYNKMFD DQFHMCLEFPAQNRYIIAFPLICSHFQNCTHEMCPEERHHIRERSLSVVN IFLEEMAKEAKNIITTICDEQCTMADALLPKHCAKILSVQSARKKKDKSK SKHFDDIRKPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEF AFAPREYLCQNLEHRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVL QTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYNTWYSEVLLRRV SAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGPYGIKT LNETLMWHIANQVQELKSLVSTNKEVLITLRTSFDKPEVMKEQFKRLQDV DRVLQRMTIIGVIICFRNLVHEALVDVLDKRIPFLLSSVKDFQEHLPGGD QIRVASEMASAAGLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMVFVAV SIPKLARNENSFYRATIDGHSNNTHCMAAAINNIFGALFTICGQSDMEDR MKEFLALASSSLLRLGQESDKEATRNRESIYLLLDEIVKQSPFLTMDLLE SCFPYVLIRNAYHGVYKQEQILGLAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hem-PA | 1126 | CG5837-PA | 1..1126 | 1..1126 | 5791 | 100 | Plus |