Clone LD43531 Report

Search the DGRC for LD43531

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:435
Well:31
Vector:pOT2
Associated Gene/TranscriptHDAC6-RA
Protein status:LD43531.pep: gold
Preliminary Size:4016
Sequenced Size:4503

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6170 2001-01-01 Release 2 assignment
CG6170 2003-01-01 Sim4 clustering to Release 3
CG6170 2003-02-24 Blastp of sequenced clone
HDAC6 2008-04-29 Release 5.5 accounting
HDAC6 2008-08-15 Release 5.9 accounting
HDAC6 2008-12-18 5.12 accounting

Clone Sequence Records

LD43531.complete Sequence

4503 bp (4503 high quality bases) assembled on 2003-02-24

GenBank Submission: BT004866

> LD43531.complete
CCACACAAACATTGCACTCCGCTCCGCCCGCGCGTTCTCATTTCCCATCT
CTCTCACTCTGTCTCTCGCGCTCACCGTCTCTCTCTCTCGCTCCGCCTCG
CAACCCCCACAGCGCTCCACAAACCGGGCCCCACATTCTTGTGTGTGATT
TCTGGTTCAGGTTCTGATTTCCCGCGTGTCCTTGTGTGTGTGCGCGCTGC
AGTGTCTGTGTATCTGTTACTGTTGCTGCATCTTCTGCATCAACTGCAAC
GTTACCAAAAATCAAAAGACAATCGCCTGCAAAAGCTTAATTTTGTTGCT
CAGTGTTTTAAGTATTAGCTGTTTGCAAGCAGCACACACACGTAAGAAAC
AACAAGAACAACGATAAAAGACAACAACACAAATGCAGAGCATTTGAAGC
GCAAACACACACAAGCATTCGGTGCGGCTGTAAGAGCGAGACACAAAATA
AGGCTAATTTATAAAAGAAAAGTGTGCTGCAAGGAATCGATAAATAACGG
GAGTCGAGGAGCGGAATAGGAGTAACCAATAAATATAAATACTGTAAATG
CGATATTAAAAAGCGACAACAACAACAAAAAGCAGCTGTGAATCACTCCG
TCCCGCTCCCCCGCGCTTTCAGTCACTCCAGTTGCTCCACTTCCATATAT
ATTCGGATTTGGACTCCGATTCGGATACGGATTTCGCTTGGTTCGATTCT
GTTTTCTTCGGATCGGTTTAGCTTTGCTTGCCAACTCGAAATCCCACAAA
CATGAGCCCGCCCATCGTCACGCGACGGAGTGCGCAGCAGGCAAAGATTC
AGACACGGGCAATGGCCAGTAAATCGAAGACGGGCACGACAGGGGCGGCG
ACGGCGGCCGGCGGCACCGGCAGCAGCAGCGGCAGTATCAGCGGCGGATT
TAATGCCGCCGATCCGCGAAAGTCGAACAAACCGAACGCAGCGCTCTTGG
AGGCGAAACGTCGAGCTCGGAACAACATGCTCAAGAATCAGGGCTGCGGA
TCGCAGGAGAGCGTCACGGATATATTCCAGAATGCTGTCAACAGCAAGAG
TCTGGTGCGGAAACCAACGGCACTGATCTACGATGAGTCCATGAGCCAGC
ACTGTTGCCTGTGGGACAAGGAGCACTACGAGTGTCCCGAGCGCTTCACA
CGAGTCCTGGAACGCTGTCGCGAACTAAATCTGACGGAGCGCTGCCTGGA
GTTGCCCTCGAGATCGGCGACCAAGGATGAAATTCTGCGCCTGCACACAG
AGGAGCACTTCGAGCGGCTGAAGGAGACGTCCGGGATTCGCGATGACGAG
CGCATGGAGGAGCTGAGCTCCCGCTACGATTCAATTTACATTCATCCGTC
CACATTCGAGCTCTCCCTGCTGGCCAGCGGCTCCACCATCGAATTGGTGG
ACCATCTGGTCGCCGGAAAGGCGCAGAATGGCATGGCCATCATCCGGCCA
CCGGGTCACCATGCGATGAAGGCCGAGTACAACGGTTATTGCTTCTTCAA
CAACGTGGCACTGGCCACCCAGCACGCCCTCGATGTTCACAAGCTGCAGC
GCATCCTGATCATCGACTACGATGTGCATCATGGGCAGGGAACCCAGCGG
TTCTTCTACAACGATCCCAGGGTGGTTTACTTCTCCATCCATCGCTTCGA
GCACGGAAGCTTCTGGCCGCATCTGCACGAGTCGGATTACCACGCCATTG
GATCGGGAGCGGGCACGGGATACAACTTCAATGTGCCGTTGAATGCGACG
GGTATGACCAATGGCGATTACCTGGCCATTTTCCAGCAGCTGCTGCTGCC
GGTGGCCCTGGAATTCCAGCCGGAGCTGATCATCGTTTCGGCTGGCTATG
ATGCGGCGCTGGGCTGTCCGGAGGGTGAGATGGAGGTGACGCCGGCCTGC
TATCCGCACCTGCTGAATCCGCTGCTGCGACTGGCCGATGCCCGGGTGGC
CGTCGTTCTGGAGGGCGGCTACTGCCTGGACTCGCTGGCCGAGGGTGCGG
CCCTAACCCTGCGCTCCCTGCTCGGCGATCCTTGTCCGCCGCTGGTGGAG
ACAGTGCCACTGCCGCGTGCGGAACTCGCCCAGGCCCTGCTCAGCTGCAT
TGCCGTGCACCGACCCCACTGGCGATGTCTGCAGCTCCAGCAGACCTACG
ATTGCGTCGAATTGCAGGATCGGGATAAGGAAGAGGATCTGCACACGGTA
CTGCGCCATTGGATTGGTGGACCACCGCCTATGGATCGTTACCCTACGCG
CGATACGGCCATTCCGCTGCCGCCGGAAAAGCTGACCAGCAATGCCGCTC
GTCTGCAGGTGCTGCGCGCGGAGACGAAGCTATCGGTGCCGTCGTTTAAG
GTGTGTTATGCCTACGATGCCCAAATGCTTCTGCACTGCAATCTCAATGA
TACGGGGCATCCGGAGCAGCCGTCGCGCATCCAGCACATCCACAAGATGC
ACGACGACTACGGTCTGCTGAAGCAGATGAAGCAACTGTCCCCCAGGGCG
GCCACCACAGACGAGGTGTGCCTGGCCCACACTCGCGCCCATGTGAATAC
AGTGCGTCGATTGCTGGGCCGCGAGCCGAAGGAACTGCATGACGCTGCTG
GGATCTACAACTCGGTGTATCTGCATCCGCGCACCTTCGATTGCGCCACC
CTGGCCGCCGGTTTAGTGCTGCAGGCGGTGGACAGTGTGCTGCGTGGCGA
GTCCCGCAGCGGCATCTGCAACGTCCGTCCGCCGGGCCATCATGCCGAGC
AGGATCATCCGCACGGCTTCTGCATTTTCAACAATGTGGCCATTGCGGCG
CAGTATGCCATTCGGGATTTCGGTCTGGAGCGTGTGCTGATCGTCGACTG
GGACGTCCATCACGGCAATGGGACGCAGCACATTTTCGAGTCCAATCCCA
AGGTGCTCTACATCAGCTTACATCGCTACGAGCACGGCTCCTTCTTCCCG
AAGGGACCCGATGGCAATTTCGATGTGGTGGGCAAGGGAGCCGGCAGGGG
CTTCAATGTGAACATACCCTGGAACAAGAAGGGCATGGGTGACCTGGAGT
ACGCACTGGCCTTCCAGCAGCTGATCATGCCCATTGCGTACGAGTTCAAT
CCGCAGCTGGTGTTGGTATCCGCCGGATTCGATGCTGCCATCGGCGATCC
CTTGGGCGGATGCAAGGTGACGGCCGAGGGCTACGGCATGCTCACCCACT
GGCTGTCGGCTTTGGCCAGCGGCCGGATAATCGTTTGCCTGGAAGGTGGC
TACAATGTGAACTCCATTTCGTACGCGATGACCATGTGCACCAAGACGCT
GCTGGGTGATCCCGTGCCGACGCCCCAGCTGGGAGCCACGGCGCTGCAGA
AGCCACCAACGGTGGCCTTCCAGAGCTGTGTGGAATCGCTGCAGCAGTGC
CTGCAGGTGCAGCGCAACCACTGGCGCTCGCTGGAGTTCGTCGGACGGCG
GCTGCCGCGGGATCCCGTTGTGGGCGAGAACAACAACGAGGATTTTCTTA
CCGCCTCCTTGCGACACTTGAATATCTCAAATGACGATGCTACGGCTGCG
GCGGGCGGACTCGCCGGCGATCGTCCCGACTGCGGCGATGAGCGGCCCAG
CGGGAGCAAGCCCAAAGTCAAGGTAAAAACGCTCAGCGACTACTTGGCGG
AGAACAAGGAGGCCCTCGAGCAGAGTGAGATGTTCGCCGTGTATCCGCTC
AAGACGTGTCCGCACTTGAGGCTCCTACGTCCGGAGGAGGCGCCCCGATC
ACTAGACAGCGGAGCGGAGTGCAGCGTTTGCGGATCGACGGGGGAGAACT
GGGTGTGCCTGAGCTGCAGGCATGTGGCCTGCGGTCGCTATGTGAACGCC
CACATGGAGCAGCATTCAGTGGAGGAGCAGCATCCGCTGGCGATGAGCAC
GGCTGACCTGTCTGTGTGGTGCTACGCGTGCTCCGCGTACGTGGACCATC
CCCGCCTGTATGCCTACCTCAATCCGCTGCACGAGGACAAGTTCCAGGAA
CCGATGGCCTGGACACATGGGTGTGCGTGGCGCGAGGATGGCTGCTATGC
GACGGGGCCCGATGGGCGAGATGAGGATGACGATGATGATAATGGCGCCG
GTAGCAGCATTTGCCTGCGACTGGAGCGCAACAACTGACCCTTAGCCATC
CGCGTGCTGGACGCCCTCACGGACTACTTGTGCGCGCTCTGCCCGCCACT
AAGGCACCTAATCCATTTCCTGGCCGAGCACCTCTGGCCGCTGCTGGAGC
GCATTTACCTTAACCTGTTGCACTACTTCCTGGCCCACTGAGCACCCCAT
ATCCAATCCTCTAGCCCGCACCCACAACTGATCTGAAAACTGCTGCAACT
GGCAGCCGGTCGGTCATCCCCTGGAGATCCTGGCACCAGTCACCATACCA
TTTATACAAATGCAAATTGTTAAAGTTATCAACTAATGATCTAATAAATA
ATTCAAGTGTTTTTTGAGTTTATTTTCGAATACAAAAAAAAAAAAAAAAA
AAA

LD43531.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:18:06
Subject Length Description Subject Range Query Range Score Percent Strand
HDAC6-RA 4838 HDAC6-RA 356..4838 1..4483 22415 100 Plus
HDAC6.o 4406 HDAC6.o 1..3607 17..3623 18035 100 Plus
HDAC6.n 4398 HDAC6.n 1045..3669 1034..3661 13070 99.8 Plus
HDAC6.n 4398 HDAC6.n 1..1017 17..1033 5085 100 Plus
HDAC6.o 4406 HDAC6.o 3605..4406 3660..4461 4010 100 Plus
HDAC6.n 4398 HDAC6.n 3670..4398 3750..4478 3645 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:31:08
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 15226549..15227959 1618..3028 7040 99.9 Plus
chrX 22417052 chrX 15223247..15224000 1..754 3710 99.5 Plus
chrX 22417052 chrX 15229564..15230297 3750..4483 3670 100 Plus
chrX 22417052 chrX 15228007..15228642 3027..3662 3180 100 Plus
chrX 22417052 chrX 15224926..15225206 754..1034 1405 100 Plus
chrX 22417052 chrX 15226226..15226499 1348..1621 1370 100 Plus
chrX 22417052 chrX 15225482..15225666 1164..1348 925 100 Plus
chrX 22417052 chrX 15225287..15225417 1034..1164 655 100 Plus
chrX 22417052 chrX 15228772..15228861 3660..3749 450 100 Plus
chrX 22417052 chrX 15232677..15232760 4383..4465 250 89.3 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:38:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:31:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15336612..15338022 1618..3028 7055 100 Plus
X 23542271 X 15333310..15334063 1..754 3770 100 Plus
X 23542271 X 15339627..15340361 3750..4484 3675 100 Plus
X 23542271 X 15338070..15338705 3027..3662 3180 100 Plus
X 23542271 X 15334989..15335269 754..1034 1405 100 Plus
X 23542271 X 15336289..15336562 1348..1621 1370 100 Plus
X 23542271 X 15335545..15335729 1164..1348 925 100 Plus
X 23542271 X 15335350..15335480 1034..1164 655 100 Plus
X 23542271 X 15338835..15338924 3660..3749 450 100 Plus
X 23542271 X 15342740..15342823 4383..4465 250 89.3 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:57:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 15344710..15346120 1618..3028 7055 100 Plus
X 23527363 X 15341408..15342161 1..754 3770 100 Plus
X 23527363 X 15347725..15348459 3750..4484 3675 100 Plus
X 23527363 X 15346168..15346803 3027..3662 3180 100 Plus
X 23527363 X 15343087..15343367 754..1034 1405 100 Plus
X 23527363 X 15344387..15344660 1348..1621 1370 100 Plus
X 23527363 X 15343643..15343827 1164..1348 925 100 Plus
X 23527363 X 15343448..15343578 1034..1164 655 100 Plus
X 23527363 X 15346933..15347022 3660..3749 450 100 Plus
X 23527363 X 15350838..15350921 4383..4465 260 89.2 Plus
Blast to na_te.dros performed 2019-03-15 22:31:06
Subject Length Description Subject Range Query Range Score Percent Strand
gtwin 7411 gtwin GTWIN 7411bp 3993..4038 680..634 124 76.6 Minus

LD43531.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:32:02 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 15225483..15225666 1165..1348 100 -> Plus
chrX 15226227..15226498 1349..1620 100 -> Plus
chrX 15226552..15227959 1621..3028 99 -> Plus
chrX 15223247..15224000 1..754 93 -> Plus
chrX 15224927..15225015 755..843 100 == Plus
chrX 15225070..15225205 898..1033 100 -> Plus
chrX 15225287..15225417 1034..1164 100 -> Plus
chrX 15228009..15228641 3029..3661 100 -> Plus
chrX 15228774..15228861 3662..3749 100 -> Plus
chrX 15229564..15230297 3750..4483 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:26:07 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
HDAC6-RA 1..3387 752..4138 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:48:14 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
HDAC6-RA 1..3387 752..4138 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:23:11 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
HDAC6-RG 1..3540 752..4291 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:39:35 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
HDAC6-RA 1..3387 752..4138 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:26:04 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
HDAC6-RG 1..3540 752..4291 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:00:28 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
HDAC6-RA 356..4833 1..4478 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:48:14 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
HDAC6-RA 356..4838 1..4483 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:23:11 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
HDAC6-RA 1..4483 1..4483 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:39:35 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
HDAC6-RA 356..4833 1..4478 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:26:04 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
HDAC6-RA 1..4483 1..4483 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:32:02 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
X 15333310..15334063 1..754 100 -> Plus
X 15334990..15335268 755..1033 100 -> Plus
X 15335350..15335480 1034..1164 100 -> Plus
X 15335546..15335729 1165..1348 100 -> Plus
X 15336290..15336561 1349..1620 100 -> Plus
X 15336615..15338022 1621..3028 100 -> Plus
X 15338072..15338704 3029..3661 100 -> Plus
X 15338837..15338924 3662..3749 100 -> Plus
X 15339627..15340360 3750..4483 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:32:02 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
X 15333310..15334063 1..754 100 -> Plus
X 15334990..15335268 755..1033 100 -> Plus
X 15335350..15335480 1034..1164 100 -> Plus
X 15335546..15335729 1165..1348 100 -> Plus
X 15336290..15336561 1349..1620 100 -> Plus
X 15336615..15338022 1621..3028 100 -> Plus
X 15338072..15338704 3029..3661 100 -> Plus
X 15338837..15338924 3662..3749 100 -> Plus
X 15339627..15340360 3750..4483 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:32:02 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
X 15333310..15334063 1..754 100 -> Plus
X 15334990..15335268 755..1033 100 -> Plus
X 15335350..15335480 1034..1164 100 -> Plus
X 15335546..15335729 1165..1348 100 -> Plus
X 15336290..15336561 1349..1620 100 -> Plus
X 15336615..15338022 1621..3028 100 -> Plus
X 15338072..15338704 3029..3661 100 -> Plus
X 15338837..15338924 3662..3749 100 -> Plus
X 15339627..15340360 3750..4483 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:23:11 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15227343..15228096 1..754 100 -> Plus
arm_X 15229023..15229301 755..1033 100 -> Plus
arm_X 15229383..15229513 1034..1164 100 -> Plus
arm_X 15229579..15229762 1165..1348 100 -> Plus
arm_X 15230323..15230594 1349..1620 100 -> Plus
arm_X 15230648..15232055 1621..3028 100 -> Plus
arm_X 15232105..15232737 3029..3661 100 -> Plus
arm_X 15232870..15232957 3662..3749 100 -> Plus
arm_X 15233660..15234393 3750..4483 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:09:59 Download gff for LD43531.complete
Subject Subject Range Query Range Percent Splice Strand
X 15343448..15343578 1034..1164 100 -> Plus
X 15343644..15343827 1165..1348 100 -> Plus
X 15344388..15344659 1349..1620 100 -> Plus
X 15343088..15343366 755..1033 100 -> Plus
X 15341408..15342161 1..754 100 -> Plus
X 15344713..15346120 1621..3028 100 -> Plus
X 15346170..15346802 3029..3661 100 -> Plus
X 15346935..15347022 3662..3749 100 -> Plus
X 15347725..15348458 3750..4483 100   Plus

LD43531.pep Sequence

Translation from 751 to 4137

> LD43531.pep
MSPPIVTRRSAQQAKIQTRAMASKSKTGTTGAATAAGGTGSSSGSISGGF
NAADPRKSNKPNAALLEAKRRARNNMLKNQGCGSQESVTDIFQNAVNSKS
LVRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLE
LPSRSATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPS
TFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAEYNGYCFFN
NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFE
HGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLP
VALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADARVA
VVLEGGYCLDSLAEGAALTLRSLLGDPCPPLVETVPLPRAELAQALLSCI
AVHRPHWRCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTR
DTAIPLPPEKLTSNAARLQVLRAETKLSVPSFKVCYAYDAQMLLHCNLND
TGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNT
VRRLLGREPKELHDAAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGE
SRSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDW
DVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRG
FNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDP
LGGCKVTAEGYGMLTHWLSALASGRIIVCLEGGYNVNSISYAMTMCTKTL
LGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQRNHWRSLEFVGRR
LPRDPVVGENNNEDFLTASLRHLNISNDDATAAAGGLAGDRPDCGDERPS
GSKPKVKVKTLSDYLAENKEALEQSEMFAVYPLKTCPHLRLLRPEEAPRS
LDSGAECSVCGSTGENWVCLSCRHVACGRYVNAHMEQHSVEEQHPLAMST
ADLSVWCYACSAYVDHPRLYAYLNPLHEDKFQEPMAWTHGCAWREDGCYA
TGPDGRDEDDDDDNGAGSSICLRLERNN*

LD43531.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:22:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21044-PA 1142 GF21044-PA 1..1139 1..1127 4949 81.7 Plus
Dana\GF21406-PA 1282 GF21406-PA 845..1224 530..891 638 37.8 Plus
Dana\GF21406-PA 1282 GF21406-PA 851..1247 106..479 566 33.6 Plus
Dana\GF25085-PA 525 GF25085-PA 8..318 533..851 336 30.2 Plus
Dana\GF17707-PA 438 GF17707-PA 22..324 552..855 285 26.7 Plus
Dana\GF25085-PA 525 GF25085-PA 57..266 156..371 247 31.4 Plus
Dana\GF17707-PA 438 GF17707-PA 51..309 152..413 213 26 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:22:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17876-PA 1130 GG17876-PA 1..1130 1..1128 5441 92.7 Plus
Dere\GG19512-PA 1256 GG19512-PA 820..1198 530..891 649 38.6 Plus
Dere\GG19512-PA 1256 GG19512-PA 826..1221 106..479 588 34.2 Plus
Dere\GG15241-PA 521 GG15241-PA 8..318 533..851 336 30.2 Plus
Dere\GG10995-PA 438 GG10995-PA 22..324 552..855 286 26.7 Plus
Dere\GG15241-PA 521 GG15241-PA 57..266 156..371 247 31.4 Plus
Dere\GG10995-PA 438 GG10995-PA 51..309 152..413 213 26 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:22:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17575-PA 1098 GH17575-PA 38..1068 60..1081 3747 69.6 Plus
Dgri\GH11896-PA 1312 GH11896-PA 885..1254 537..891 651 39 Plus
Dgri\GH11896-PA 1312 GH11896-PA 882..1275 106..478 596 34.8 Plus
Dgri\GH15691-PA 559 GH15691-PA 8..318 533..851 337 30.2 Plus
Dgri\GH18996-PA 436 GH18996-PA 22..324 552..855 282 26.7 Plus
Dgri\GH15691-PA 559 GH15691-PA 57..266 156..371 248 31.4 Plus
Dgri\GH18996-PA 436 GH18996-PA 51..309 152..413 205 26 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:16:03
Subject Length Description Subject Range Query Range Score Percent Strand
HDAC6-PG 1179 CG6170-PG 1..1128 1..1128 6054 100 Plus
HDAC6-PA 1128 CG6170-PA 1..1128 1..1128 6054 100 Plus
HDAC6-PB 1135 CG6170-PB 9..1135 2..1128 6049 100 Plus
HDAC6-PC 1138 CG6170-PC 12..1138 2..1128 6049 100 Plus
HDAC6-PE 1108 CG6170-PE 1..1108 21..1128 5958 100 Plus
HDAC6-PF 1022 CG6170-PF 9..1006 2..999 5308 100 Plus
HDAC6-PD 883 CG6170-PD 1..882 76..957 4728 100 Plus
HDAC4-PH 1181 CG1770-PH 754..1171 537..930 644 37.9 Plus
HDAC4-PB 1181 CG1770-PB 754..1171 537..930 644 37.9 Plus
HDAC4-PE 1203 CG1770-PE 776..1193 537..930 644 37.9 Plus
HDAC4-PJ 1205 CG1770-PJ 778..1195 537..930 644 37.9 Plus
HDAC4-PI 1205 CG1770-PI 778..1195 537..930 644 37.9 Plus
HDAC4-PF 1242 CG1770-PF 815..1232 537..930 644 37.9 Plus
HDAC4-PD 1252 CG1770-PD 825..1242 537..930 644 37.9 Plus
HDAC4-PG 1269 CG1770-PG 842..1259 537..930 644 37.9 Plus
HDAC4-PH 1181 CG1770-PH 751..1146 106..479 581 34.2 Plus
HDAC4-PB 1181 CG1770-PB 751..1146 106..479 581 34.2 Plus
HDAC4-PE 1203 CG1770-PE 773..1168 106..479 581 34.2 Plus
HDAC4-PJ 1205 CG1770-PJ 775..1170 106..479 581 34.2 Plus
HDAC4-PI 1205 CG1770-PI 775..1170 106..479 581 34.2 Plus
HDAC4-PF 1242 CG1770-PF 812..1207 106..479 581 34.2 Plus
HDAC4-PD 1252 CG1770-PD 822..1217 106..479 581 34.2 Plus
HDAC4-PG 1269 CG1770-PG 839..1234 106..479 581 34.2 Plus
HDAC1-PA 521 CG7471-PA 8..318 533..851 329 30.2 Plus
HDAC3-PA 438 CG2128-PA 22..324 552..855 290 26.7 Plus
HDAC1-PA 521 CG7471-PA 57..266 156..371 250 31.5 Plus
HDAC3-PA 438 CG2128-PA 54..309 156..413 217 26 Plus
HDAC11-PB 343 CG31119-PB 66..321 139..407 169 24.9 Plus
HDAC11-PA 343 CG31119-PA 66..321 139..407 169 24.9 Plus
HDAC11-PB 343 CG31119-PB 51..294 553..810 161 24.6 Plus
HDAC11-PA 343 CG31119-PA 51..294 553..810 161 24.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:22:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15174-PA 1137 GI15174-PA 26..1087 47..1109 4213 74 Plus
Dmoj\GI15905-PA 1224 GI15905-PA 800..1166 537..891 616 38.2 Plus
Dmoj\GI15905-PA 1224 GI15905-PA 797..1187 106..478 575 34.8 Plus
Dmoj\GI12742-PA 525 GI12742-PA 8..318 533..851 335 30.2 Plus
Dmoj\GI24497-PA 436 GI24497-PA 22..324 552..855 285 26.7 Plus
Dmoj\GI12742-PA 525 GI12742-PA 56..266 155..371 246 31.4 Plus
Dmoj\GI24497-PA 436 GI24497-PA 51..309 152..413 210 26 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:22:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14573-PA 1095 GL14573-PA 33..1091 60..1120 4079 70.3 Plus
Dper\GL14574-PA 149 GL14574-PA 3..145 261..403 689 86.7 Plus
Dper\GL13309-PA 1286 GL13309-PA 863..1228 528..891 612 37.9 Plus
Dper\GL13309-PA 1286 GL13309-PA 871..1233 106..462 543 34.1 Plus
Dper\GL14574-PA 149 GL14574-PA 7..145 692..830 389 50.4 Plus
Dper\GL22935-PA 530 GL22935-PA 8..318 533..851 333 30.2 Plus
Dper\GL22163-PA 436 GL22163-PA 22..320 552..851 282 27 Plus
Dper\GL22935-PA 530 GL22935-PA 57..307 156..413 245 28.7 Plus
Dper\GL22163-PA 436 GL22163-PA 27..309 129..413 211 24.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:22:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19406-PA 1095 GA19406-PA 24..1091 47..1120 4096 70.1 Plus
Dpse\GA14617-PA 1295 GA14617-PA 857..1237 528..891 659 38.7 Plus
Dpse\GA14617-PA 1295 GA14617-PA 865..1242 106..462 586 35.4 Plus
Dpse\Rpd3-PA 530 GA20378-PA 8..318 533..851 334 30.2 Plus
Dpse\GA27397-PA 436 GA27397-PA 22..320 552..851 282 27 Plus
Dpse\Rpd3-PA 530 GA20378-PA 56..307 155..413 247 28.7 Plus
Dpse\GA27397-PA 436 GA27397-PA 27..309 129..413 211 24.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:22:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20078-PA 619 GM20078-PA 3..619 516..1128 3091 94.2 Plus
Dsec\GM19975-PA 479 GM19975-PA 1..476 1..472 2465 97.1 Plus
Dsec\GM20078-PA 619 GM20078-PA 23..384 107..462 764 40.2 Plus
Dsec\GM19975-PA 479 GM19975-PA 114..466 538..896 745 39.4 Plus
Dsec\GM11498-PA 1130 GM11498-PA 815..1060 530..758 385 37.9 Plus
Dsec\GM11498-PA 1130 GM11498-PA 821..1057 106..328 367 35.1 Plus
Dsec\GM14673-PA 521 GM14673-PA 8..318 533..851 336 30.2 Plus
Dsec\GM10631-PA 438 GM10631-PA 22..324 552..855 286 26.7 Plus
Dsec\GM14673-PA 521 GM14673-PA 57..266 156..371 247 31.4 Plus
Dsec\GM10631-PA 438 GM10631-PA 51..309 152..413 214 26 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:22:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\HDAC6-PA 777 GD17207-PA 156..777 512..1128 3009 90.4 Plus
Dsim\HDAC6-PA 777 GD17207-PA 1..542 2..462 1375 52.8 Plus
Dsim\GD13856-PA 521 GD13856-PA 8..318 533..851 335 30.2 Plus
Dsim\GD19615-PA 438 GD19615-PA 22..324 552..855 287 26.7 Plus
Dsim\GD13856-PA 521 GD13856-PA 57..266 156..371 247 31.4 Plus
Dsim\GD19615-PA 438 GD19615-PA 51..309 152..413 213 26 Plus
Dsim\GD18261-PA 343 GD18261-PA 51..321 553..834 155 24.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:22:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17051-PA 1138 GJ17051-PA 1..1103 1..1111 4212 72 Plus
Dvir\GJ16814-PA 1229 GJ16814-PA 805..1171 537..891 606 38.5 Plus
Dvir\GJ16814-PA 1229 GJ16814-PA 790..1176 96..462 565 34.9 Plus
Dvir\GJ15512-PA 527 GJ15512-PA 8..318 533..851 336 30.2 Plus
Dvir\GJ24563-PA 436 GJ24563-PA 5..324 533..855 283 26.6 Plus
Dvir\GJ15512-PA 527 GJ15512-PA 57..266 156..371 248 31.5 Plus
Dvir\GJ24563-PA 436 GJ24563-PA 27..309 129..413 215 25 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:22:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20022-PA 1136 GK20022-PA 14..1136 2..1128 4417 73.2 Plus
Dwil\GK25029-PA 1322 GK25029-PA 895..1264 537..891 651 38.7 Plus
Dwil\GK25029-PA 1322 GK25029-PA 892..1269 106..462 585 35.2 Plus
Dwil\GK16595-PA 531 GK16595-PA 8..318 533..851 336 30.2 Plus
Dwil\GK11850-PA 442 GK11850-PA 23..321 552..851 282 27 Plus
Dwil\GK16595-PA 531 GK16595-PA 57..266 156..371 246 31.4 Plus
Dwil\GK11850-PA 442 GK11850-PA 28..310 129..413 211 24.3 Plus
Dwil\GK10873-PA 342 GK10873-PA 79..324 154..411 177 25.2 Plus
Dwil\GK10873-PA 342 GK10873-PA 50..320 553..834 164 25.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:22:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17180-PA 1136 GE17180-PA 1..1136 1..1128 5565 92.5 Plus
Dyak\GE16165-PA 1261 GE16165-PA 825..1203 530..891 648 38.6 Plus
Dyak\GE16165-PA 1261 GE16165-PA 831..1226 106..479 588 34.2 Plus
Dyak\GE21462-PA 521 GE21462-PA 8..318 533..851 336 30.2 Plus
Dyak\GE25277-PA 438 GE25277-PA 22..324 552..855 286 26.7 Plus
Dyak\GE21462-PA 521 GE21462-PA 57..266 156..371 247 31.4 Plus
Dyak\GE25277-PA 438 GE25277-PA 51..309 152..413 213 26 Plus

LD43531.hyp Sequence

Translation from 751 to 4137

> LD43531.hyp
MSPPIVTRRSAQQAKIQTRAMASKSKTGTTGAATAAGGTGSSSGSISGGF
NAADPRKSNKPNAALLEAKRRARNNMLKNQGCGSQESVTDIFQNAVNSKS
LVRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLE
LPSRSATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPS
TFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAEYNGYCFFN
NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFE
HGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLP
VALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADARVA
VVLEGGYCLDSLAEGAALTLRSLLGDPCPPLVETVPLPRAELAQALLSCI
AVHRPHWRCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTR
DTAIPLPPEKLTSNAARLQVLRAETKLSVPSFKVCYAYDAQMLLHCNLND
TGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNT
VRRLLGREPKELHDAAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGE
SRSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDW
DVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRG
FNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDP
LGGCKVTAEGYGMLTHWLSALASGRIIVCLEGGYNVNSISYAMTMCTKTL
LGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQRNHWRSLEFVGRR
LPRDPVVGENNNEDFLTASLRHLNISNDDATAAAGGLAGDRPDCGDERPS
GSKPKVKVKTLSDYLAENKEALEQSEMFAVYPLKTCPHLRLLRPEEAPRS
LDSGAECSVCGSTGENWVCLSCRHVACGRYVNAHMEQHSVEEQHPLAMST
ADLSVWCYACSAYVDHPRLYAYLNPLHEDKFQEPMAWTHGCAWREDGCYA
TGPDGRDEDDDDDNGAGSSICLRLERNN*

LD43531.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:48:30
Subject Length Description Subject Range Query Range Score Percent Strand
HDAC6-PG 1179 CG6170-PG 1..1128 1..1128 6054 100 Plus
HDAC6-PA 1128 CG6170-PA 1..1128 1..1128 6054 100 Plus
HDAC6-PB 1135 CG6170-PB 9..1135 2..1128 6049 100 Plus
HDAC6-PC 1138 CG6170-PC 12..1138 2..1128 6049 100 Plus
HDAC6-PE 1108 CG6170-PE 1..1108 21..1128 5958 100 Plus