BDGP Sequence Production Resources |
Search the DGRC for LD43554
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 435 |
Well: | 54 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5599-RA |
Protein status: | LD43554.pep: gold |
Preliminary Size: | 1867 |
Sequenced Size: | 1848 |
Gene | Date | Evidence |
---|---|---|
CG5599 | 2001-01-01 | Release 2 assignment |
CG5599 | 2001-10-10 | Blastp of sequenced clone |
CG5599 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5599 | 2008-04-29 | Release 5.5 accounting |
CG5599 | 2008-08-15 | Release 5.9 accounting |
CG5599 | 2008-12-18 | 5.12 accounting |
1848 bp (1848 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061469
> LD43554.complete CGATCCGAACCGATCCGCGTTTTTATCCCTTGCATTTCTAGGTTCCAAAG TCCCGCTAAATGGCAACACACCTCCTCCGAAACGGCGCTACATGTTGGCT GCTCAGGAACTGCATTTCCCAACGTGCCGCGTTGAGACGCTGCCTGCATG TGACCTCAAGCCTGGACAAGACGGTCTCCTTCAACCTCAGCGACATTGGC GAGGGAATCCGCGAGGTAACCGTCAAGGAGTGGTTCGTGAAAGAGGGCGA CACCGTGGAGCAGTTCGACAATCTCTGCGAGGTGCAATCGGACAAGGCAT CGGTGACCATCACCAGTCGCTATGATGGCAAGATAACCAAGATTCACCAC AAAATCGATGAGATTGCTCTGGTCGGCAAGCCTCTGCTCGATTTCGATGT GGTGAATGAAGACGAAGATGAGCCGGAGGACTCTTCTTCCTCTTCCTCCT CCACATCTTCCGATAGTTCAGCAAGCGAAAACGAGGAGAAGCAATCAGCT GAAGCATCTGCGACGCCCACAGAAGGTCGTGTGATCATACCCGCCACGCC CTCGGTTCGTCGTCTGGCCAAGGAACACCAGTTGGATCTGGCCAAGGTGC CAGCAACGGGAAAGAATGGTCGTGTGCTTAAGGGTGATATTCTGGAGTTT CTGGGCCAAGTTCCTCCCGGTACTAACGTTCCACATCCCACACTATTGGC GAAAACGCCTAGTGCTGCTCCAAGTGGAGCAGCAAGTGTTTCTGTGCCCG CTGATCGCGTCGAAGTGCTCAAGGGAGTGCGCAAGGCCATGCTGAAATCG ATGACGGAATCCCTGAAAATCCCCCATTTTGCTTACAGCGACGAAATCGA CATGACCCAGTTGATGCAATTCCGTAACCAACTGCAGTTAGTGGCCAAGG AGAATGGCGTGCCCAAGCTCACGTTCATGCCGTTCTGCATCAAGGCTGCT AGCATTGCGCTGTCCAAATATCCAATTGTTAACAGCTCCCTGGATTTGGC CAGCGAATCGCTGGTCTTCAAGGGTGCCCACAACATAAGCGTTGCCATCG ATACACCACAGGGTCTAGTGGTGCCGAATATTAAGAACTGCCAGACAAAG ACTATTATCGAGATTGCCAAGGATCTGAATGCACTGGTGGAGCGCGGTAG GACTGGCTCCCTGTCTCCGGCAGACTTTGCCGATGGCACCTTCTCGCTTT CCAACATAGGAGTGATTGGCGGTACCTACACACATCCTTGTATAATGGCG CCGCAGGTGGCCATCGGTGCTATGGGTAGGACCAAGGCGGTGCCGCGTTT CAACGACAAGGATGAGGTGGTCAAGGCGTATGTGATGAGCGTAAGCTGGT CCGCCGACCATCGCGTCATCGACGGCGTGACCATGGCCAGCTTCTCCAAC GTTTGGAAGCAGTATCTGGAGAATCCTGCCCTTTTCCTACTACACTAGAG AGCCTATTACTCGAAAACGCTTACTTTTACGGATGAGGCTCTTTCCCATG CATTTATCTAGACATATCTAATATTGTAAATTGTACGACAATCTGCTTTG AGCTGGAACAGGTGCCATGTGCCGCCACCCATCCCCAAAATGTGCATTTA TAGGAGGTAAGCCACTCTGAGCGGCTCCTCGATTAATTTAAGCTCCTGGC GCACATGGCTAACTTTCCGTTTATTTACTTTTATCGTTGTTAACCTGCAT TTATATATCAGTTTTTTTTTTAAGTTTGTTAAGCAACAACTTCAGCGTAC AGTTTAACTGTAACCGCATGCATTTATATTAAAGCTTTGTTTCAATGGCT GTCCAATAAATATCAGAAACGGTTTATGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5599-RA | 2041 | CG5599-RA | 131..1962 | 1..1832 | 9160 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 14976968..14977652 | 131..815 | 3410 | 99.9 | Plus |
chrX | 22417052 | chrX | 14978180..14978795 | 1214..1829 | 3080 | 100 | Plus |
chrX | 22417052 | chrX | 14977718..14978117 | 815..1214 | 2000 | 100 | Plus |
chrX | 22417052 | chrX | 14976334..14976469 | 1..136 | 665 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 15086802..15087486 | 131..815 | 3425 | 100 | Plus |
X | 23542271 | X | 15088014..15088632 | 1214..1832 | 3095 | 100 | Plus |
X | 23542271 | X | 15087552..15087951 | 815..1214 | 2000 | 100 | Plus |
X | 23542271 | X | 15086168..15086303 | 1..136 | 665 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 15094900..15095584 | 131..815 | 3425 | 100 | Plus |
X | 23527363 | X | 15096112..15096730 | 1214..1832 | 3095 | 100 | Plus |
X | 23527363 | X | 15095650..15096049 | 815..1214 | 2000 | 100 | Plus |
X | 23527363 | X | 15094266..15094401 | 1..136 | 665 | 99.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 14976334..14976464 | 1..131 | 100 | -> | Plus |
chrX | 14976969..14977652 | 132..815 | 99 | -> | Plus |
chrX | 14977719..14978117 | 816..1214 | 100 | -> | Plus |
chrX | 14978181..14978795 | 1215..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5599-RA | 1..1389 | 60..1448 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5599-RA | 1..1389 | 60..1448 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5599-RA | 1..1389 | 60..1448 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5599-RA | 1..1389 | 60..1448 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5599-RA | 1..1389 | 60..1448 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5599-RA | 31..1859 | 1..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5599-RA | 31..1859 | 1..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5599-RA | 44..1872 | 1..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5599-RA | 31..1859 | 1..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5599-RA | 44..1872 | 1..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15086168..15086298 | 1..131 | 100 | -> | Plus |
X | 15086803..15087486 | 132..815 | 100 | -> | Plus |
X | 15087553..15087951 | 816..1214 | 100 | -> | Plus |
X | 15088015..15088629 | 1215..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15086168..15086298 | 1..131 | 100 | -> | Plus |
X | 15086803..15087486 | 132..815 | 100 | -> | Plus |
X | 15087553..15087951 | 816..1214 | 100 | -> | Plus |
X | 15088015..15088629 | 1215..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15086168..15086298 | 1..131 | 100 | -> | Plus |
X | 15086803..15087486 | 132..815 | 100 | -> | Plus |
X | 15087553..15087951 | 816..1214 | 100 | -> | Plus |
X | 15088015..15088629 | 1215..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 14980201..14980331 | 1..131 | 100 | -> | Plus |
arm_X | 14980836..14981519 | 132..815 | 100 | -> | Plus |
arm_X | 14981586..14981984 | 816..1214 | 100 | -> | Plus |
arm_X | 14982048..14982662 | 1215..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15094901..15095584 | 132..815 | 100 | -> | Plus |
X | 15095651..15096049 | 816..1214 | 100 | -> | Plus |
X | 15096113..15096727 | 1215..1829 | 100 | Plus | |
X | 15094266..15094396 | 1..131 | 100 | -> | Plus |
Translation from 59 to 1447
> LD43554.pep MATHLLRNGATCWLLRNCISQRAALRRCLHVTSSLDKTVSFNLSDIGEGI REVTVKEWFVKEGDTVEQFDNLCEVQSDKASVTITSRYDGKITKIHHKID EIALVGKPLLDFDVVNEDEDEPEDSSSSSSSTSSDSSASENEEKQSAEAS ATPTEGRVIIPATPSVRRLAKEHQLDLAKVPATGKNGRVLKGDILEFLGQ VPPGTNVPHPTLLAKTPSAAPSGAASVSVPADRVEVLKGVRKAMLKSMTE SLKIPHFAYSDEIDMTQLMQFRNQLQLVAKENGVPKLTFMPFCIKAASIA LSKYPIVNSSLDLASESLVFKGAHNISVAIDTPQGLVVPNIKNCQTKTII EIAKDLNALVERGRTGSLSPADFADGTFSLSNIGVIGGTYTHPCIMAPQV AIGAMGRTKAVPRFNDKDEVVKAYVMSVSWSADHRVIDGVTMASFSNVWK QYLENPALFLLH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21220-PA | 464 | GF21220-PA | 1..464 | 1..462 | 1949 | 82.7 | Plus |
Dana\GF16855-PA | 469 | GF16855-PA | 270..466 | 261..460 | 274 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17863-PA | 461 | GG17863-PA | 1..461 | 1..462 | 2213 | 93.7 | Plus |
Dere\GG18067-PA | 469 | GG18067-PA | 270..466 | 261..460 | 283 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24642-PA | 460 | GH24642-PA | 1..460 | 1..462 | 1728 | 73 | Plus |
Dgri\GH18803-PA | 481 | GH18803-PA | 282..478 | 261..460 | 276 | 36.1 | Plus |
Dgri\GH18804-PA | 400 | GH18804-PA | 201..394 | 261..457 | 254 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5599-PA | 462 | CG5599-PA | 1..462 | 1..462 | 2348 | 100 | Plus |
muc-PF | 512 | CG5261-PF | 75..512 | 33..461 | 354 | 25.7 | Plus |
muc-PB | 512 | CG5261-PB | 75..512 | 33..461 | 354 | 25.7 | Plus |
muc-PA | 421 | CG5261-PA | 5..421 | 54..461 | 353 | 26.5 | Plus |
muc-PD | 489 | CG5261-PD | 75..489 | 33..461 | 345 | 26.3 | Plus |
muc-PE | 496 | CG5261-PE | 75..496 | 33..461 | 339 | 25.8 | Plus |
muc-PC | 473 | CG5261-PC | 75..473 | 33..461 | 322 | 25.9 | Plus |
CG5214-PA | 468 | CG5214-PA | 67..465 | 29..460 | 301 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21689-PA | 460 | GI21689-PA | 1..460 | 1..462 | 1826 | 78.1 | Plus |
Dmoj\GI22695-PA | 370 | GI22695-PA | 171..364 | 261..457 | 291 | 38.1 | Plus |
Dmoj\GI22693-PA | 482 | GI22693-PA | 283..479 | 261..460 | 282 | 36.6 | Plus |
Dmoj\GI23773-PA | 514 | GI23773-PA | 230..514 | 156..461 | 240 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15179-PA | 387 | GL15179-PA | 1..387 | 1..462 | 1498 | 67 | Plus |
Dper\GL25816-PA | 493 | GL25816-PA | 290..493 | 240..461 | 230 | 27.7 | Plus |
Dper\GL11994-PA | 145 | GL11994-PA | 1..142 | 318..460 | 197 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18998-PA | 462 | GA18998-PA | 1..462 | 1..462 | 2005 | 82.8 | Plus |
Dpse\GA26154-PA | 479 | GA26154-PA | 280..476 | 261..460 | 280 | 36.6 | Plus |
Dpse\GA18768-PA | 515 | GA18768-PA | 294..515 | 240..461 | 250 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12058-PA | 440 | GM12058-PA | 1..440 | 1..462 | 2226 | 91.6 | Plus |
Dsec\GM23935-PA | 451 | GM23935-PA | 252..448 | 261..460 | 279 | 36.6 | Plus |
Dsec\GM16455-PA | 494 | GM16455-PA | 273..494 | 240..461 | 264 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17193-PA | 460 | GD17193-PA | 1..460 | 1..462 | 2376 | 97.2 | Plus |
Dsim\GD18745-PA | 468 | GD18745-PA | 269..465 | 261..460 | 279 | 36.6 | Plus |
Dsim\GD23472-PA | 496 | GD23472-PA | 275..496 | 240..461 | 264 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15870-PA | 466 | GJ15870-PA | 1..465 | 1..461 | 1790 | 77 | Plus |
Dvir\GJ23422-PA | 474 | GJ23422-PA | 275..468 | 261..457 | 258 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16188-PA | 463 | GK16188-PA | 1..463 | 1..462 | 1882 | 78.7 | Plus |
Translation from 59 to 1447
> LD43554.hyp MATHLLRNGATCWLLRNCISQRAALRRCLHVTSSLDKTVSFNLSDIGEGI REVTVKEWFVKEGDTVEQFDNLCEVQSDKASVTITSRYDGKITKIHHKID EIALVGKPLLDFDVVNEDEDEPEDSSSSSSSTSSDSSASENEEKQSAEAS ATPTEGRVIIPATPSVRRLAKEHQLDLAKVPATGKNGRVLKGDILEFLGQ VPPGTNVPHPTLLAKTPSAAPSGAASVSVPADRVEVLKGVRKAMLKSMTE SLKIPHFAYSDEIDMTQLMQFRNQLQLVAKENGVPKLTFMPFCIKAASIA LSKYPIVNSSLDLASESLVFKGAHNISVAIDTPQGLVVPNIKNCQTKTII EIAKDLNALVERGRTGSLSPADFADGTFSLSNIGVIGGTYTHPCIMAPQV AIGAMGRTKAVPRFNDKDEVVKAYVMSVSWSADHRVIDGVTMASFSNVWK QYLENPALFLLH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5599-PA | 462 | CG5599-PA | 1..462 | 1..462 | 2348 | 100 | Plus |
CG5261-PF | 512 | CG5261-PF | 75..512 | 33..461 | 354 | 25.7 | Plus |
CG5261-PB | 512 | CG5261-PB | 75..512 | 33..461 | 354 | 25.7 | Plus |
CG5261-PA | 421 | CG5261-PA | 5..421 | 54..461 | 353 | 26.5 | Plus |
CG5261-PD | 489 | CG5261-PD | 75..489 | 33..461 | 345 | 26.3 | Plus |