Clone LD43561 Report

Search the DGRC for LD43561

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:435
Well:61
Vector:pOT2
Associated Gene/TranscriptCG3071-RA
Protein status:LD43561.pep: gold
Preliminary Size:2021
Sequenced Size:1965

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3071 2001-11-09 Blastp of sequenced clone
CG3071 2003-01-01 Sim4 clustering to Release 3
CG3071 2008-04-29 Release 5.5 accounting
CG3071 2008-08-15 Release 5.9 accounting
CG3071 2008-12-18 5.12 accounting

Clone Sequence Records

LD43561.complete Sequence

1965 bp (1965 high quality bases) assembled on 2001-11-09

GenBank Submission: AY069659

> LD43561.complete
CATCTAACACGTGCGCGCCCGAAAGAGATTTAGTAGAAATACACAGACAG
GATGCAGAACTCCTTTCTTCCACTGAACACACGGCGTTTTCGACAGCGGG
CCCAGGTGGAAACGCCGGATACGGTGTACTGGGACCGACTGGCGAAACCA
GAACTACTCAAGGAGCACAACACCATCGATTATTTGGACTTCAGTCCAAG
CGATCCTGACAACTTTGTTGTGACCTGTTCGGTGCGCGTTCAGATTTACA
ACCTGGTGACCATGCTTGTGGTAAAGAACCTTTCCCGATTCCAAAAGACC
GCATACGGCGCCACCTTCCGGCAGGATGGTCGACTCCTGGCCGCCGGCGA
CGAGGAGGGCCATGTCAAGCTATTCGACACCACCAGTCGCAACATCTTGC
GTTTGTTCAAGGGACACACGGCACCAGTACACCGCACCTTCTTTACGGCG
GACAAGCTGCAGCTAGCCAGTTTTGGAGACGACAAGTCGGTCCGTCTGTG
GGACGTGGCAAACGAGAAGGTGGTGCAAACGTACGAGGACACGCACACCG
ACTACGTTCGTGCAGGCGCCATGCATCCGCAGGCAGGGCATATGTTCGTC
TCCGGCGGCTACGATGGCAAGATCAAACTGTACGATACGAGAGCGGAAAC
GGCGGTGCAGCGCACCTTAGATCACGGAGCTCCGGTGGAGTCCATGTTGT
TCCTTCCGAACGGCTCTATTTTCGTCAGCGCCGGCGGCAGCCAGGTGCGC
GTATGGGATCTCATCAGCGGCTGCCGTCTGCTCACCATGATGTCGCAGCA
TCACAAAACAGTAACTTGTCTGCGACTGGGATCCGATGGCAGGAGATTGC
TCTCAGGCGGGCTCGATAGGCACGTGAAAATCTACGATGTGAGCACCTAC
AAAACAGTGCACACATTGACTTATCCCAATGCGGTGGTCAGCATGGCTGT
TGCTGACGGAGATCAAGCAGTTGTGGCTGGAATGGTCGATGGTCTAGTCT
CCATTCGTCGCATGATGGTAGACAGCAAGCCCAGTCATTTGAAAAAGATT
CGTGCGGATCGCGCTCGAAAGTACTTCGTGAGTACGAAACGCACGAACAA
CACCCAAGAGGTTGATCACACCATCAAGGACCACGTCAAGGGGCCTGGAT
TGAAATCCTACGATGTGCACTTGCGCCAGTTTAACCACAAGAAGGCTTTG
GACGACGTGATGAATGCGCAGAAGATGCAATACCAGCCGGAGCTCATTGT
GGCTGTCATCACGGACCTTCTGCACCGTGGATCACTGGGAAAAGCCCTCA
CGGGTCGTCATGAGGCAGCGCTTGTCCGATTCATCGACTTCATTTGCAAC
CACTTGGGCGAGGTGCGATTCATGCGCCCGCTGATGATGGCCGCGAGCAC
GGTCCTTGATGTCTTCGAGCAACGATTGGTGGCCTACAGCCAGAAGCTGA
TGAAAGCCTTGCAACGATTGTCACTTGCAATGCAGGAGGAGGTGAGGCTC
ACCGCCGAGCTGATGCGGATGAAGGGTGCTGTGGATATGCTCATTGGGAT
TTCAATGGACAATAGCGAGGTAGCCCATAAGCCCACCTATGTGGAGACAA
AGACACCTAAGATGCATCCCTCCGTGGCGGCGCAAAATTATGTGGTCTTA
GTTGAGTGACCCAGGCCGACGTAGAACAACGATATAGCCACATAGCTTTG
ATATTAAGTATATAAGTAGTAGTAGTTTAAGTATAAAGCAGTTTCAATAC
CCATTACGCATGTATATATCTTTCTTTATTAAATACATACTTAAAATGAA
CGTTTCGTCGTGCATGCCAATTTCAGTTTTGAAATGTACAATGAAATTTT
GTCTGCCGTTTTACGCATAATAAAAAAAAAAAAACAATGTTAATGGGGCA
GCAAAACAGCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA

LD43561.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:59:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG3071-RA 2144 CG3071-RA 115..2026 1..1912 9560 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:01:29
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 2157006..2158771 144..1912 8720 99.7 Plus
chrX 22417052 chrX 2156795..2156938 1..144 720 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:38:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:01:27
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2263056..2264824 144..1912 8845 100 Plus
X 23542271 X 2262845..2262988 1..144 720 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:24:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 2271154..2272922 144..1912 8845 100 Plus
X 23527363 X 2270943..2271086 1..144 720 100 Plus
Blast to na_te.dros performed on 2019-03-16 12:01:28 has no hits.

LD43561.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:02:34 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 2156795..2156938 1..144 100 -> Plus
chrX 2157007..2158771 145..1913 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:26:12 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 1..1608 52..1659 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:32:44 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 1..1608 52..1659 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:46:36 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 1..1608 52..1659 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:00:22 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 1..1608 52..1659 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:34:21 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 1..1608 52..1659 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:11:35 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 4..1912 1..1909 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:32:44 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 6..1917 1..1913 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:46:36 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 9..1920 1..1913 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:00:22 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 4..1912 1..1909 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:34:21 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 9..1920 1..1913 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:02:34 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
X 2262845..2262988 1..144 100 -> Plus
X 2263057..2264824 145..1913 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:02:34 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
X 2262845..2262988 1..144 100 -> Plus
X 2263057..2264824 145..1913 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:02:34 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
X 2262845..2262988 1..144 100 -> Plus
X 2263057..2264824 145..1913 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:46:36 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2156878..2157021 1..144 100 -> Plus
arm_X 2157090..2158857 145..1913 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:37:02 Download gff for LD43561.complete
Subject Subject Range Query Range Percent Splice Strand
X 2271155..2272922 145..1913 99   Plus
X 2270943..2271086 1..144 100 -> Plus

LD43561.pep Sequence

Translation from 51 to 1658

> LD43561.pep
MQNSFLPLNTRRFRQRAQVETPDTVYWDRLAKPELLKEHNTIDYLDFSPS
DPDNFVVTCSVRVQIYNLVTMLVVKNLSRFQKTAYGATFRQDGRLLAAGD
EEGHVKLFDTTSRNILRLFKGHTAPVHRTFFTADKLQLASFGDDKSVRLW
DVANEKVVQTYEDTHTDYVRAGAMHPQAGHMFVSGGYDGKIKLYDTRAET
AVQRTLDHGAPVESMLFLPNGSIFVSAGGSQVRVWDLISGCRLLTMMSQH
HKTVTCLRLGSDGRRLLSGGLDRHVKIYDVSTYKTVHTLTYPNAVVSMAV
ADGDQAVVAGMVDGLVSIRRMMVDSKPSHLKKIRADRARKYFVSTKRTNN
TQEVDHTIKDHVKGPGLKSYDVHLRQFNHKKALDDVMNAQKMQYQPELIV
AVITDLLHRGSLGKALTGRHEAALVRFIDFICNHLGEVRFMRPLMMAAST
VLDVFEQRLVAYSQKLMKALQRLSLAMQEEVRLTAELMRMKGAVDMLIGI
SMDNSEVAHKPTYVETKTPKMHPSVAAQNYVVLVE*

LD43561.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22207-PA 539 GF22207-PA 2..539 1..535 2238 78.3 Plus
Dana\GF13988-PA 579 GF13988-PA 277..533 68..321 250 23.9 Plus
Dana\GF22217-PA 361 GF22217-PA 68..315 77..321 246 24.8 Plus
Dana\GF22837-PA 318 GF22837-PA 11..296 35..314 238 26.9 Plus
Dana\GF11078-PA 704 GF11078-PA 432..635 105..310 234 31.2 Plus
Dana\GF13988-PA 579 GF13988-PA 323..579 79..325 210 24.6 Plus
Dana\GF22217-PA 361 GF22217-PA 105..324 79..289 204 26.9 Plus
Dana\GF11078-PA 704 GF11078-PA 454..646 85..279 182 25.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:23:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12927-PA 535 GG12927-PA 1..535 1..535 2560 88.8 Plus
Dere\GG12938-PA 361 GG12938-PA 68..315 77..321 246 24.8 Plus
Dere\GG22709-PA 704 GG22709-PA 431..635 104..310 243 32.5 Plus
Dere\GG23503-PA 318 GG23503-PA 11..317 35..325 238 25.5 Plus
Dere\GG12938-PA 361 GG12938-PA 105..324 79..289 204 26.9 Plus
Dere\GG17291-PA 471 GG17291-PA 177..462 37..318 204 24.6 Plus
Dere\GG22709-PA 704 GG22709-PA 454..646 85..279 188 25 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:23:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24703-PA 535 GH24703-PA 2..535 3..535 2118 71.9 Plus
Dgri\GH19592-PA 515 GH19592-PA 1..515 1..535 1846 63.8 Plus
Dgri\GH24921-PA 357 GH24921-PA 64..311 77..321 249 24.8 Plus
Dgri\GH20712-PA 706 GH20712-PA 433..644 104..315 239 30.1 Plus
Dgri\GH11378-PA 318 GH11378-PA 11..317 35..325 238 25.2 Plus
Dgri\GH24921-PA 357 GH24921-PA 101..320 79..289 209 27.4 Plus
Dgri\GH20712-PA 706 GH20712-PA 456..648 85..279 184 24.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG3071-PA 535 CG3071-PA 1..535 1..535 2754 100 Plus
wds-PB 361 CG17437-PB 68..312 77..318 238 25.1 Plus
wds-PA 361 CG17437-PA 68..312 77..318 238 25.1 Plus
Taf5-PA 704 CG7704-PA 431..634 104..309 231 31.7 Plus
Rack1-PC 318 CG7111-PC 11..296 35..314 229 26.9 Plus
Rack1-PD 318 CG7111-PD 11..296 35..314 229 26.9 Plus
Rack1-PA 318 CG7111-PA 11..296 35..314 229 26.9 Plus
Poc1-PA 391 CG10191-PA 21..289 42..310 205 23.9 Plus
Poc1-PB 403 CG10191-PB 21..289 42..310 205 23.9 Plus
CG3909-PA 331 CG3909-PA 38..322 38..318 200 24.3 Plus
CG10931-PA 345 CG10931-PA 61..261 86..288 200 27.5 Plus
wds-PB 361 CG17437-PB 105..324 79..289 197 26.9 Plus
wds-PA 361 CG17437-PA 105..324 79..289 197 26.9 Plus
Taf5-PA 704 CG7704-PA 409..646 31..279 191 23.6 Plus
Poc1-PA 391 CG10191-PA 103..315 82..289 187 25.5 Plus
Poc1-PB 403 CG10191-PB 103..315 82..289 187 25.5 Plus
kat80-PC 818 CG13956-PC 28..294 91..355 186 24.4 Plus
kat80-PA 819 CG13956-PA 28..294 91..355 186 24.4 Plus
kat80-PB 819 CG13956-PB 28..294 91..355 186 24.4 Plus
U4-U6-60K-PA 553 CG6322-PA 267..483 87..297 185 26.9 Plus
CG3436-PC 347 CG3436-PC 104..320 87..297 182 26.6 Plus
CG3436-PA 347 CG3436-PA 104..320 87..297 182 26.6 Plus
Lis-1-PG 411 CG8440-PG 132..407 63..318 178 22.9 Plus
Lis-1-PF 411 CG8440-PF 132..407 63..318 178 22.9 Plus
Lis-1-PB 411 CG8440-PB 132..407 63..318 178 22.9 Plus
Lis-1-PA 411 CG8440-PA 132..407 63..318 178 22.9 Plus
CG3436-PC 347 CG3436-PC 48..321 74..335 174 21.9 Plus
CG3436-PA 347 CG3436-PA 48..321 74..335 174 21.9 Plus
beta'COP-PA 914 CG6699-PA 37..255 103..318 173 29.7 Plus
Tango4-PA 482 CG1796-PA 188..402 97..314 170 25.1 Plus
can-PA 942 CG6577-PA 620..822 75..279 168 24.2 Plus
U4-U6-60K-PA 553 CG6322-PA 259..482 121..333 166 28.3 Plus
CG30116-PB 1698 CG30116-PB 1242..1477 76..307 164 25.4 Plus
CG30116-PC 1698 CG30116-PC 1242..1477 76..307 164 25.4 Plus
CG30116-PD 1701 CG30116-PD 1242..1477 76..307 164 25.4 Plus
CG30116-PA 1922 CG30116-PA 1242..1477 76..307 164 25.4 Plus
CG9062-PB 668 CG9062-PB 40..279 92..321 163 23.8 Plus
CG9062-PC 680 CG9062-PC 40..279 92..321 163 23.8 Plus
Lis-1-PG 411 CG8440-PG 122..365 95..318 161 25.6 Plus
Lis-1-PF 411 CG8440-PF 122..365 95..318 161 25.6 Plus
Lis-1-PB 411 CG8440-PB 122..365 95..318 161 25.6 Plus
Lis-1-PA 411 CG8440-PA 122..365 95..318 161 25.6 Plus
CG1671-PA 787 CG1671-PA 312..587 56..318 161 21.5 Plus
ago-PA 1326 CG15010-PA 986..1235 32..293 161 24.9 Plus
ago-PB 1326 CG15010-PB 986..1235 32..293 161 24.9 Plus
ago-PC 1326 CG15010-PC 986..1235 32..293 161 24.9 Plus
CG10931-PA 345 CG10931-PA 49..252 32..236 160 26 Plus
ago-PA 1326 CG15010-PA 1005..1219 93..318 160 24.2 Plus
ago-PB 1326 CG15010-PB 1005..1219 93..318 160 24.2 Plus
ago-PC 1326 CG15010-PC 1005..1219 93..318 160 24.2 Plus
CstF50-PA 424 CG2261-PA 114..338 89..290 157 23.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:23:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21800-PA 534 GI21800-PA 3..534 4..535 2104 71.4 Plus
Dmoj\GI21774-PA 358 GI21774-PA 65..312 77..321 248 24.8 Plus
Dmoj\GI20797-PA 708 GI20797-PA 419..648 91..318 240 30.3 Plus
Dmoj\GI18083-PA 318 GI18083-PA 11..317 35..325 237 25.4 Plus
Dmoj\GI19111-PA 373 GI19111-PA 85..281 89..286 233 25.1 Plus
Dmoj\GI21774-PA 358 GI21774-PA 102..321 79..289 206 26.9 Plus
Dmoj\GI19111-PA 373 GI19111-PA 127..338 89..297 175 24.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:23:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13335-PA 539 GL13335-PA 1..539 1..535 1946 67.9 Plus
Dper\GL13093-PA 356 GL13093-PA 63..310 77..321 251 24.8 Plus
Dper\GL20028-PA 684 GL20028-PA 411..623 104..316 238 31.8 Plus
Dper\GL19487-PA 317 GL19487-PA 11..295 35..314 236 27.2 Plus
Dper\GL25365-PA 413 GL25365-PA 20..289 41..310 219 25.2 Plus
Dper\GL13093-PA 356 GL13093-PA 100..356 79..325 209 24.6 Plus
Dper\GL20028-PA 684 GL20028-PA 389..626 31..279 188 23.2 Plus
Dper\GL25365-PA 413 GL25365-PA 12..183 117..290 160 24.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:23:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15906-PA 538 GA15906-PA 1..538 1..535 2107 71.6 Plus
Dpse\GA14510-PA 356 GA14510-PA 63..310 77..321 251 24.8 Plus
Dpse\GA20529-PA 700 GA20529-PA 427..638 104..315 238 31.9 Plus
Dpse\GA20111-PA 317 GA20111-PA 11..295 35..314 236 27.2 Plus
Dpse\GA10144-PA 413 GA10144-PA 20..289 41..310 219 25.5 Plus
Dpse\GA14510-PA 356 GA14510-PA 100..356 79..325 209 24.6 Plus
Dpse\GA20529-PA 700 GA20529-PA 405..642 31..279 188 23.2 Plus
Dpse\GA10144-PA 413 GA10144-PA 12..183 117..290 167 24.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:23:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19219-PA 535 GM19219-PA 1..535 1..535 2725 94.6 Plus
Dsec\GM15319-PA 535 GM15319-PA 1..535 1..535 2683 93.5 Plus
Dsec\GM12383-PA 271 GM12383-PA 1..252 1..254 1202 87.4 Plus
Dsec\GM19230-PA 361 GM19230-PA 68..315 77..321 247 24.8 Plus
Dsec\GM13296-PA 318 GM13296-PA 11..296 35..314 238 26.9 Plus
Dsec\GM19230-PA 361 GM19230-PA 105..324 79..289 206 26.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:23:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16604-PA 535 GD16604-PA 1..535 1..535 2716 94 Plus
Dsim\GD16718-PA 503 GD16718-PA 1..495 1..496 2172 82.3 Plus
Dsim\GD16610-PA 361 GD16610-PA 68..315 77..321 247 24.8 Plus
Dsim\GD22465-PA 318 GD22465-PA 11..296 35..314 238 26.9 Plus
Dsim\GD25948-PA 704 GD25948-PA 431..642 104..315 238 31.9 Plus
Dsim\GD16610-PA 361 GD16610-PA 105..324 79..289 206 26.9 Plus
Dsim\GD25948-PA 704 GD25948-PA 409..646 31..279 188 23.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:23:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16972-PA 536 GJ16972-PA 3..536 4..535 2112 72.7 Plus
Dvir\GJ16947-PA 358 GJ16947-PA 65..312 77..321 247 24.8 Plus
Dvir\GJ20531-PA 708 GJ20531-PA 435..639 104..310 246 32.5 Plus
Dvir\GJ22241-PA 373 GJ22241-PA 85..320 89..321 241 26.8 Plus
Dvir\GJ16744-PA 318 GJ16744-PA 11..317 35..325 237 25.4 Plus
Dvir\GJ16947-PA 358 GJ16947-PA 102..321 79..289 205 26.9 Plus
Dvir\GJ22241-PA 373 GJ22241-PA 101..329 63..289 184 24.1 Plus
Dvir\GJ20531-PA 708 GJ20531-PA 458..650 85..279 180 24.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:23:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10329-PA 540 GK10329-PA 1..540 1..535 2144 73.8 Plus
Dwil\GK20967-PA 704 GK20967-PA 442..642 115..315 250 33.7 Plus
Dwil\GK19997-PA 358 GK19997-PA 65..312 77..321 248 24.8 Plus
Dwil\GK15300-PA 318 GK15300-PA 11..296 35..314 238 26.9 Plus
Dwil\GK10412-PA 414 GK10412-PA 19..289 40..310 209 26.5 Plus
Dwil\GK19997-PA 358 GK19997-PA 102..321 79..289 206 26.9 Plus
Dwil\GK20967-PA 704 GK20967-PA 454..646 85..279 185 25.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:23:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16254-PA 535 GE16254-PA 1..535 1..535 2501 86.7 Plus
Dyak\GE16263-PA 361 GE16263-PA 68..315 77..321 246 24.8 Plus
Dyak\GE13065-PA 704 GE13065-PA 431..635 104..310 245 32.5 Plus
Dyak\Rack1-PA 318 GE18331-PA 24..317 48..325 235 25.9 Plus
Dyak\GE16263-PA 361 GE16263-PA 105..324 79..289 204 26.9 Plus
Dyak\GE26002-PA 332 GE26002-PA 15..323 7..318 199 24.1 Plus
Dyak\GE13065-PA 704 GE13065-PA 454..646 85..279 181 24.5 Plus

LD43561.hyp Sequence

Translation from 51 to 1658

> LD43561.hyp
MQNSFLPLNTRRFRQRAQVETPDTVYWDRLAKPELLKEHNTIDYLDFSPS
DPDNFVVTCSVRVQIYNLVTMLVVKNLSRFQKTAYGATFRQDGRLLAAGD
EEGHVKLFDTTSRNILRLFKGHTAPVHRTFFTADKLQLASFGDDKSVRLW
DVANEKVVQTYEDTHTDYVRAGAMHPQAGHMFVSGGYDGKIKLYDTRAET
AVQRTLDHGAPVESMLFLPNGSIFVSAGGSQVRVWDLISGCRLLTMMSQH
HKTVTCLRLGSDGRRLLSGGLDRHVKIYDVSTYKTVHTLTYPNAVVSMAV
ADGDQAVVAGMVDGLVSIRRMMVDSKPSHLKKIRADRARKYFVSTKRTNN
TQEVDHTIKDHVKGPGLKSYDVHLRQFNHKKALDDVMNAQKMQYQPELIV
AVITDLLHRGSLGKALTGRHEAALVRFIDFICNHLGEVRFMRPLMMAAST
VLDVFEQRLVAYSQKLMKALQRLSLAMQEEVRLTAELMRMKGAVDMLIGI
SMDNSEVAHKPTYVETKTPKMHPSVAAQNYVVLVE*

LD43561.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG3071-PA 535 CG3071-PA 1..535 1..535 2754 100 Plus
wds-PB 361 CG17437-PB 68..312 77..318 238 25.1 Plus
wds-PA 361 CG17437-PA 68..312 77..318 238 25.1 Plus
Rack1-PC 318 CG7111-PC 11..296 35..314 229 26.9 Plus
Rack1-PD 318 CG7111-PD 11..296 35..314 229 26.9 Plus
wds-PB 361 CG17437-PB 105..324 79..289 197 26.9 Plus
wds-PA 361 CG17437-PA 105..324 79..289 197 26.9 Plus