BDGP Sequence Production Resources |
Search the DGRC for LD43683
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 436 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | obst-A-RA |
Protein status: | LD43683.pep: gold |
Preliminary Size: | 1364 |
Sequenced Size: | 1215 |
Gene | Date | Evidence |
---|---|---|
CG17052 | 2001-01-01 | Release 2 assignment |
CG17052 | 2002-07-13 | Blastp of sequenced clone |
CG17052 | 2003-01-01 | Sim4 clustering to Release 3 |
obst-A | 2008-04-29 | Release 5.5 accounting |
obst-A | 2008-08-15 | Release 5.9 accounting |
obst-A | 2008-12-18 | 5.12 accounting |
1215 bp (1215 high quality bases) assembled on 2002-07-13
GenBank Submission: BT001512
> LD43683.complete CTTGAGTCGCGATTAGTTGCTCAAGTATCCAGTTGCCAGGATCGTTGCTC TGCTTTTTTTTTTCTCAGACCCCGAGTCCAAAATGAAGTTATTTTTATGT GCCATTGCTGTGACCCTGTGTGTGGCGACAACCGTGTCCGCCGCCAACTT CGAGTGCCCGAAGCCCAATGGCCAGTTCGCCGATGAGGTGCAGTGCGACA AGTTCTACGTCTGCGACGACGGAGTGGCCAAGGCGAAGCTCTGTCCCGAT GGCCTGGTCTTCGATCCACTCAACCGCAAGTTCAACAAGTGCGACCAGCC CTTCAATGTGGACTGCGAGGACCGCACTGAGCTCCAGGAGCCGAAGTCCA GCAAGTACTGCCCGCGCAAGAACGGCTTCTTCGCGCATCCCGATCCCGCC GTGTGCAACATCTTCTACAACTGCATCGAAGGCGACGCCCTGGAGACCAA GTGCACCGTCGGCCTCCACTTCGACGAGTACTCGGGCACCTGCGTGTGGC CGGATACCGCTAAGCGCGAGGGCTGCAATCCGGAGCAGAGAACCTCCGAG ACCGGCTTCGTGTGCCCCAAGGATCAGCCAAAGACCGACGATCGCGGCCA GGTGGTGACCCACCCCAAGTATCCGCATCCCACCGACTGCCAGAAGTTCT ACGTGTGCCTGAACGGCGAGGATCCCAGGGATCTGGGCTGCCAGCTGGGC GAGGTCTACAACGATGCCACCGAGATGTGCGATGCTCCCGAGAATGTGCC CGGCTGCGAGGACTGGTACAAGGATGTGGACGACAAGAAGGACTAAGCCA CTTCCGGTCGCTTCTACTTCTCCTCATCACATCCACACTCACAACTCATG CACATGCACACGCACACACAAGCACACTGAAAGAAATTATCAATCAAATC AAATCGAAACAATTCGAAACAAATCAACACACAGATTCGCGTCTTAGTCA CTTAAATTTAGTAGTTCTAGCCCATTTCCTATAGAGCGTATGTGTAGCAG TTAAACTTCAATACTCTGACCTATCTATTTCTTAACTATCTTTCTCTATA TCTGACTACTTCTAACTACTTTTCTAACTACCCAAATCTCCATTTCTGTG CCCAACCAAACGCTGCCAAATTGTTGTGTATATATTTCCCGCTTTCAGAC TTTCGCCTTATTATTATACAAAAAGAATAAACTGAATTTTTTATAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
obst-A-RA | 1949 | obst-A-RA | 82..1277 | 1..1197 | 5945 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20107470..20108124 | 540..1194 | 3260 | 99.8 | Plus |
chrX | 22417052 | chrX | 20107196..20107400 | 336..540 | 1025 | 100 | Plus |
chrX | 22417052 | chrX | 20106647..20106850 | 132..335 | 1020 | 100 | Plus |
chrX | 22417052 | chrX | 20105482..20105611 | 1..131 | 605 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 20241885..20242542 | 540..1197 | 3290 | 100 | Plus |
X | 23542271 | X | 20241611..20241815 | 336..540 | 1025 | 100 | Plus |
X | 23542271 | X | 20241062..20241265 | 132..335 | 1020 | 100 | Plus |
X | 23542271 | X | 20239897..20240026 | 1..131 | 605 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 20227024..20227681 | 540..1197 | 3290 | 100 | Plus |
X | 23527363 | X | 20226750..20226954 | 336..540 | 1025 | 100 | Plus |
X | 23527363 | X | 20226201..20226404 | 132..335 | 1020 | 100 | Plus |
X | 23527363 | X | 20225036..20225165 | 1..131 | 615 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
accord2 | 7650 | accord2 QBERT 7650bp | 3901..3940 | 922..883 | 110 | 75 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20105482..20105611 | 1..131 | 99 | -> | Plus |
chrX | 20106647..20106850 | 132..335 | 100 | -> | Plus |
chrX | 20107196..20107399 | 336..539 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
obst-A-RA | 1..714 | 83..796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
obst-A-RA | 1..714 | 83..796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
obst-A-RA | 1..714 | 83..796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
obst-A-RA | 1..714 | 83..796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
obst-A-RA | 1..714 | 83..796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
obst-A-RA | 38..1230 | 1..1194 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
obst-A-RA | 38..1230 | 1..1194 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
obst-A-RA | 43..1235 | 1..1194 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
obst-A-RA | 38..1230 | 1..1194 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
obst-A-RA | 43..1235 | 1..1194 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20239897..20240026 | 1..131 | 99 | -> | Plus |
X | 20241062..20241265 | 132..335 | 100 | -> | Plus |
X | 20241611..20241814 | 336..539 | 100 | -> | Plus |
X | 20241885..20242539 | 540..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20239897..20240026 | 1..131 | 99 | -> | Plus |
X | 20241062..20241265 | 132..335 | 100 | -> | Plus |
X | 20241611..20241814 | 336..539 | 100 | -> | Plus |
X | 20241885..20242539 | 540..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20239897..20240026 | 1..131 | 99 | -> | Plus |
X | 20241062..20241265 | 132..335 | 100 | -> | Plus |
X | 20241611..20241814 | 336..539 | 100 | -> | Plus |
X | 20241885..20242539 | 540..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20112685..20112888 | 336..539 | 100 | -> | Plus |
arm_X | 20110971..20111100 | 1..131 | 99 | -> | Plus |
arm_X | 20112136..20112339 | 132..335 | 100 | -> | Plus |
arm_X | 20112959..20113613 | 540..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20227024..20227678 | 540..1194 | 100 | Plus | |
X | 20225036..20225165 | 1..131 | 99 | -> | Plus |
X | 20226201..20226404 | 132..335 | 100 | -> | Plus |
X | 20226750..20226953 | 336..539 | 100 | -> | Plus |
Translation from 0 to 795
> LD43683.hyp LESRLVAQVSSCQDRCSAFFFSDPESKMKLFLCAIAVTLCVATTVSAANF ECPKPNGQFADEVQCDKFYVCDDGVAKAKLCPDGLVFDPLNRKFNKCDQP FNVDCEDRTELQEPKSSKYCPRKNGFFAHPDPAVCNIFYNCIEGDALETK CTVGLHFDEYSGTCVWPDTAKREGCNPEQRTSETGFVCPKDQPKTDDRGQ VVTHPKYPHPTDCQKFYVCLNGEDPRDLGCQLGEVYNDATEMCDAPENVP GCEDWYKDVDDKKD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
obst-A-PB | 237 | CG17052-PB | 1..237 | 28..264 | 1356 | 100 | Plus |
obst-A-PA | 237 | CG17052-PA | 1..237 | 28..264 | 1356 | 100 | Plus |
obst-B-PA | 337 | CG4778-PA | 85..284 | 51..258 | 548 | 46.6 | Plus |
Gasp-PB | 235 | CG10287-PB | 1..228 | 28..262 | 432 | 37.4 | Plus |
Gasp-PA | 258 | CG10287-PA | 1..228 | 28..262 | 429 | 37 | Plus |
Translation from 82 to 795
> LD43683.pep MKLFLCAIAVTLCVATTVSAANFECPKPNGQFADEVQCDKFYVCDDGVAK AKLCPDGLVFDPLNRKFNKCDQPFNVDCEDRTELQEPKSSKYCPRKNGFF AHPDPAVCNIFYNCIEGDALETKCTVGLHFDEYSGTCVWPDTAKREGCNP EQRTSETGFVCPKDQPKTDDRGQVVTHPKYPHPTDCQKFYVCLNGEDPRD LGCQLGEVYNDATEMCDAPENVPGCEDWYKDVDDKKD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20239-PA | 239 | GF20239-PA | 1..239 | 1..237 | 1194 | 96.2 | Plus |
Dana\GF15739-PA | 322 | GF15739-PA | 75..274 | 24..231 | 495 | 46.6 | Plus |
Dana\GF18629-PA | 257 | GF18629-PA | 1..229 | 1..236 | 390 | 36.9 | Plus |
Dana\GF14304-PA | 237 | GF14304-PA | 13..219 | 24..231 | 333 | 37.6 | Plus |
Dana\GF14303-PA | 242 | GF14303-PA | 3..227 | 2..231 | 276 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19275-PA | 237 | GG19275-PA | 1..237 | 1..237 | 1244 | 99.6 | Plus |
Dere\GG10079-PA | 333 | GG10079-PA | 85..284 | 24..231 | 498 | 46.6 | Plus |
Dere\GG10600-PA | 258 | GG10600-PA | 1..229 | 1..236 | 392 | 36.9 | Plus |
Dere\GG24283-PA | 250 | GG24283-PA | 6..236 | 8..236 | 332 | 35.4 | Plus |
Dere\GG19276-PA | 230 | GG19276-PA | 1..223 | 1..224 | 248 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12617-PA | 235 | GH12617-PA | 1..234 | 1..235 | 1089 | 86.8 | Plus |
Dgri\GH11070-PA | 313 | GH11070-PA | 64..266 | 21..231 | 497 | 46.4 | Plus |
Dgri\GH14287-PA | 255 | GH14287-PA | 1..229 | 1..236 | 383 | 36.5 | Plus |
Dgri\GH10690-PA | 237 | GH10690-PA | 10..224 | 21..236 | 329 | 36.7 | Plus |
Dgri\GH10689-PA | 249 | GH10689-PA | 6..222 | 8..227 | 271 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
obst-A-PB | 237 | CG17052-PB | 1..237 | 1..237 | 1356 | 100 | Plus |
obst-A-PA | 237 | CG17052-PA | 1..237 | 1..237 | 1356 | 100 | Plus |
obst-B-PA | 337 | CG4778-PA | 85..284 | 24..231 | 548 | 46.6 | Plus |
Gasp-PB | 235 | CG10287-PB | 1..228 | 1..235 | 432 | 37.4 | Plus |
Gasp-PA | 258 | CG10287-PA | 1..228 | 1..235 | 429 | 37 | Plus |
obst-E-PB | 249 | CG11142-PB | 6..225 | 8..225 | 384 | 38.1 | Plus |
obst-E-PA | 242 | CG11142-PA | 6..221 | 8..225 | 317 | 32.3 | Plus |
Peritrophin-A-PB | 230 | CG17058-PB | 6..230 | 5..230 | 269 | 29.3 | Plus |
Peritrophin-A-PA | 230 | CG17058-PA | 6..230 | 5..230 | 269 | 29.3 | Plus |
Peritrophin-A-PC | 157 | CG17058-PC | 6..154 | 5..151 | 192 | 30.9 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 1318..1486 | 28..196 | 182 | 32.4 | Plus |
CG43896-PB | 1324 | CG43896-PB | 137..355 | 14..233 | 169 | 26.4 | Plus |
CG43896-PD | 2113 | CG43896-PD | 137..355 | 14..233 | 169 | 26.4 | Plus |
CG43896-PC | 2113 | CG43896-PC | 137..355 | 14..233 | 169 | 26.4 | Plus |
teq-PC | 563 | CG4821-PC | 67..259 | 26..216 | 167 | 29.4 | Plus |
teq-PF | 2379 | CG4821-PF | 67..259 | 26..216 | 167 | 29.4 | Plus |
teq-PG | 2792 | CG4821-PG | 67..259 | 26..216 | 167 | 29.4 | Plus |
CG10725-PB | 269 | CG10725-PB | 91..267 | 32..222 | 146 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11032-PA | 247 | GI11032-PA | 1..237 | 1..237 | 1093 | 84.8 | Plus |
Dmoj\GI17587-PA | 316 | GI17587-PA | 67..266 | 24..231 | 499 | 46.6 | Plus |
Dmoj\GI23181-PA | 256 | GI23181-PA | 1..229 | 1..236 | 393 | 37.3 | Plus |
Dmoj\GI11221-PA | 233 | GI11221-PA | 15..226 | 24..236 | 335 | 36.7 | Plus |
Dmoj\GI11215-PA | 247 | GI11215-PA | 6..221 | 8..225 | 277 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13082-PA | 238 | GL13082-PA | 1..238 | 1..237 | 1195 | 95.4 | Plus |
Dper\GL18956-PA | 316 | GL18956-PA | 73..272 | 24..231 | 500 | 46.6 | Plus |
Dper\GL23484-PA | 259 | GL23484-PA | 1..229 | 1..236 | 378 | 35.7 | Plus |
Dper\GL19117-PA | 227 | GL19117-PA | 9..220 | 24..236 | 319 | 36.2 | Plus |
Dper\GL19116-PA | 243 | GL19116-PA | 6..227 | 8..231 | 279 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14300-PA | 238 | GA14300-PA | 1..238 | 1..237 | 1195 | 95.4 | Plus |
Dpse\GA18424-PA | 316 | GA18424-PA | 73..272 | 24..231 | 500 | 46.6 | Plus |
Dpse\GA10221-PA | 259 | GA10221-PA | 1..229 | 1..236 | 378 | 35.7 | Plus |
Dpse\GA25356-PA | 228 | GA25356-PA | 10..221 | 24..236 | 319 | 36.2 | Plus |
Dpse\GA10790-PA | 243 | GA10790-PA | 6..227 | 8..231 | 280 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23014-PA | 226 | GM23014-PA | 1..226 | 1..237 | 1046 | 87.4 | Plus |
Dsec\GM17883-PA | 334 | GM17883-PA | 85..284 | 24..231 | 498 | 46.6 | Plus |
Dsec\GM10569-PA | 258 | GM10569-PA | 1..229 | 1..236 | 394 | 36.9 | Plus |
Dsec\GM17998-PA | 242 | GM17998-PA | 6..227 | 8..231 | 279 | 31.4 | Plus |
Dsec\GM23015-PA | 230 | GM23015-PA | 1..223 | 1..224 | 250 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17480-PA | 429 | GD17480-PA | 167..332 | 16..181 | 873 | 97.6 | Plus |
Dsim\GD23651-PA | 334 | GD23651-PA | 85..284 | 24..231 | 498 | 46.6 | Plus |
Dsim\GD19561-PA | 258 | GD19561-PA | 3..229 | 2..236 | 389 | 36.2 | Plus |
Dsim\GD22632-PA | 249 | GD22632-PA | 6..236 | 8..236 | 336 | 35.9 | Plus |
Dsim\GD17481-PA | 230 | GD17481-PA | 11..223 | 8..224 | 247 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15813-PA | 237 | GJ15813-PA | 1..237 | 1..237 | 1142 | 89.9 | Plus |
Dvir\GJ17929-PA | 313 | GJ17929-PA | 67..266 | 24..231 | 506 | 46.6 | Plus |
Dvir\GJ14495-PA | 256 | GJ14495-PA | 1..229 | 1..236 | 387 | 36.5 | Plus |
Dvir\GJ18329-PA | 242 | GJ18329-PA | 13..229 | 19..236 | 327 | 36.3 | Plus |
Dvir\GJ18328-PA | 247 | GJ18328-PA | 6..221 | 8..225 | 279 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25193-PA | 233 | GK25193-PA | 1..230 | 1..231 | 1098 | 88.7 | Plus |
Dwil\GK12722-PA | 309 | GK12722-PA | 63..262 | 24..231 | 493 | 45.7 | Plus |
Dwil\GK14210-PA | 256 | GK14210-PA | 1..229 | 1..236 | 399 | 38.1 | Plus |
Dwil\GK15421-PA | 234 | GK15421-PA | 7..216 | 21..231 | 336 | 38.4 | Plus |
Dwil\GK22307-PA | 186 | GK22307-PA | 1..139 | 85..231 | 331 | 44.2 | Plus |
Dwil\GK22307-PA | 186 | GK22307-PA | 5..126 | 21..139 | 144 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17864-PA | 237 | GE17864-PA | 1..237 | 1..237 | 1249 | 100 | Plus |
Dyak\GE18893-PA | 334 | GE18893-PA | 85..284 | 24..231 | 494 | 46.6 | Plus |
Dyak\GE24117-PA | 258 | GE24117-PA | 1..229 | 1..236 | 387 | 36.5 | Plus |
Dyak\GE18979-PA | 249 | GE18979-PA | 6..236 | 8..236 | 324 | 35 | Plus |
Dyak\GE17865-PA | 230 | GE17865-PA | 1..223 | 1..224 | 247 | 28.8 | Plus |