BDGP Sequence Production Resources |
Search the DGRC for LD43724
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 437 |
Well: | 24 |
Vector: | pOT2 |
Associated Gene/Transcript | Mink-RA |
Protein status: | LD43724.pep: gold |
Preliminary Size: | 2849 |
Sequenced Size: | 2488 |
Gene | Date | Evidence |
---|---|---|
CG11120 | 2001-01-01 | Release 2 assignment |
CG11120 | 2002-05-20 | Blastp of sequenced clone |
CG11120 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11120 | 2008-04-29 | Release 5.5 accounting |
CG11120 | 2008-08-15 | Release 5.9 accounting |
CG11120 | 2008-12-18 | 5.12 accounting |
2488 bp (2488 high quality bases) assembled on 2002-05-20
GenBank Submission: AY118339
> LD43724.complete ATCATTGGCATTTTATTTTTAAACATAAACTAAAGATCCAGCTAAAAATG GAACTTAATATTGATAATCGCCCAAACGATGTCGGCGTCTTGGCGCCGAA CGATCAGGAAAATGAGGACGCCAATCGGAGGATGGAAAATACAGACGCTG TTAAGACTCCAGTGGCCAGGAAAACGCGACGAGCGGTCCTCAAGCGGATG AATGCCACTTCGGAAAAGAATTCGCCCACGCATCCCGATCCTCCGAAGAC ACCGGGCACTCCAGGCCATCTTAGCCAAAACACCGAAACTCCGAGACGTA GTTGCCGGAAAAGTGTGCGTCCAGCGATCGATTACGATGACATTATAGTG CGATCCGCCAAGAAGGCTATCGTCGAAGCACTTTCAGCCGATCCCGAGGG CGAGGAGCCTTCCGTCCAGAAGTGGACCACCGCGGAGGTGGGAAAAAATT CGCGCAAACGGGGTCGCAAGTCCAAGCGCATGGTCGCCAAGAAGCAGAAA ACAGAGCACATAGTTGCAGAGGATGATGAGGAGCAGGACACGGAGTTGGA GGTCCCACAGAAAAAGGTGGATCCTTCTCAGGATGCTGAAGGAAATGCAG AGGTTCAAGCAGACATAGTAGAGGAAGTGGCACTATCCACGAAGAAGTCT TCTAAAAAGTCTAAAACTAAAGATCCAGATCACGCAAATGATATTACGGA CATTGTAGTGAATCTGGAGCAACCAATATCGATAAAGAAGTCTTCTAGGG CGTCTAAAAATCCAGACACCAAGGAGCAAAATGTAGCTGATGAACTAGGT TTATGCCCACTGGATATGGACAGCCAGGAAGAAGATGAGAAGGATATTCA AGGTGGAGAAGCAAAAACAAACGCAGAGGTATTTGAAGATGAAGCCCAAA CGAGTGCAGCCGATACGGATGGTCAGAAACATGAAGAGAAAGATGAGCAA GCAGATGAAGCAACTAAACCAGCTGCGCTTGATAAAGACAAAGAAGTAAC AGCTGAAGATAAACTAAAAGAAGCTAGTGCAGTAGATGAGCAAGCAGAGG AAGAAATGCCCTCACTACTGATGGAAAGTGATGGCCTGGATGAACCAAAT CAGTCGCCTCTCAATACCACATACGATGCAGAAGACAAGAAAGATTTTGA TGGAAGTGTTATTCTGGTTGTTAGTCCCGACAAGCAGCCAAAGGCTAGCT CCTCCGACCTCGATGCAAGTGTTATTCTGGTCGGCATTACCGATATGCAG CCTGTTGTTTGCGCTCCGAAGCCGGAAATTCCGGAGGAGAAGCCGGTTAT TAAAGTTGTGCTCACCACATCAGATGATCAGGACCAAACCCTTTTAGATT TACCCGCTGAAGCTTCGCCAAATGTATCAAAGTCGAAGAAATCGAAGGGC TATCGATTCCCTACGCCCTATAAGGCAAGGCCTATGTTTAACTTTACAGG AACAGAGGAGGCAGTTCATCATGATCACGAAGTTAAAGAAGATGAACCGC ATTACACACGCAAACGTTCCAAGTCAGCCAGCAATTGGAAAGATATCATG TCACGAACTGTATCCTTTCAGAGTCCTATTGAGGTTGCCAATGTCGAAGA CATTGATAAGCGCTGGGCAGGACTTCAAAAGACCAATGTCAATAACCGGC GTAGGCGCTCAAAGTCATTGGACGAAAAACGCTGCAAGATGAGCAGGATC CCCAAGCCCAATAGAGGTGTTATACCGCTAAACAAAACCATCACACCCAG CAAGGTGAATAAGCGCACCAAGATGCCCAATTTTGCTGCCATGCATGAGA GACAGTTTGCCAAGATGGAGAGTCTGGTGGACCACGTCGAACGGAAGGCG GAACGCGCCAAGGTGCTAACCAATTCTGTACAGAAGCAAGTGCCAGGATC GGCGGCGAAGAAAATGCAGAGCACCACGTCTGTGGAGGATCGTGCTCGTC CAAGGGCAATGAAGAAGATCGACATGTCCGCCGATCGGACCGTGGTAATG GATCATCCGTCCGATAAGCTGAACTCATCACGTTTGCCTTTGAAGGCCAC CGCTCCCGCTTCTAATGTAGCTCCAAAGCCAGCTTTCAATTTGTCCACCT CCACGGTGAAGACATTCAACGCCACGTTTTCCAGCAGACCGGCCGATTCG CACGACAACAAGCTGGCTGAGCGACGCCAGCGGCGCATTGACATGTTCAA GGGTAGAACAACCAAGGACCAGAAGGAGAAAGGAGAGTTTATCCGCGGAG TGCGCCTCAACCGACGTTTTGAACTCCAAATGCAGCACCGTCGACACCTG GAGGAGGATTAGTTTCTTAACTTGATTCGTTAATTTTACTGCTTACTACC TATGCTTACTCATATATGTATATTCGCTTTAACATGTCAGATTTGTCGGC GATTCGTCAGAAAACATTTAAATTTTGCTGGTTCCAATAAAGTTGTTTAC CATTTCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20745837..20747409 | 63..1635 | 7865 | 100 | Plus |
chr3R | 27901430 | chr3R | 20747602..20748346 | 1715..2459 | 3725 | 100 | Plus |
chr3R | 27901430 | chr3R | 20747462..20747544 | 1636..1718 | 415 | 100 | Plus |
chr3R | 27901430 | chr3R | 20745711..20745777 | 1..67 | 320 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24922651..24924223 | 63..1635 | 7865 | 100 | Plus |
3R | 32079331 | 3R | 24924416..24925161 | 1715..2460 | 3730 | 100 | Plus |
3R | 32079331 | 3R | 24924276..24924358 | 1636..1718 | 415 | 100 | Plus |
3R | 32079331 | 3R | 24922525..24922591 | 1..67 | 320 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24663482..24665054 | 63..1635 | 7865 | 100 | Plus |
3R | 31820162 | 3R | 24665247..24665992 | 1715..2460 | 3730 | 100 | Plus |
3R | 31820162 | 3R | 24665107..24665189 | 1636..1718 | 415 | 100 | Plus |
3R | 31820162 | 3R | 24663356..24663422 | 1..67 | 320 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6700..6958 | 849..1109 | 146 | 54.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20745711..20745773 | 1..63 | 100 | -> | Plus |
chr3R | 20745838..20747409 | 64..1635 | 100 | -> | Plus |
chr3R | 20747462..20747542 | 1636..1716 | 100 | -> | Plus |
chr3R | 20747604..20748346 | 1717..2459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11120-RA | 1..2265 | 48..2312 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11120-RA | 1..2265 | 48..2312 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11120-RA | 1..2265 | 48..2312 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11120-RA | 1..2265 | 48..2312 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mink-RA | 1..2265 | 48..2312 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11120-RA | 80..2538 | 1..2459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11120-RA | 80..2538 | 1..2459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11120-RA | 53..2511 | 1..2459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11120-RA | 80..2538 | 1..2459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mink-RA | 53..2511 | 1..2459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24922525..24922587 | 1..63 | 100 | -> | Plus |
3R | 24922652..24924223 | 64..1635 | 100 | -> | Plus |
3R | 24924276..24924356 | 1636..1716 | 100 | -> | Plus |
3R | 24924418..24925160 | 1717..2459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24922525..24922587 | 1..63 | 100 | -> | Plus |
3R | 24922652..24924223 | 64..1635 | 100 | -> | Plus |
3R | 24924276..24924356 | 1636..1716 | 100 | -> | Plus |
3R | 24924418..24925160 | 1717..2459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24922525..24922587 | 1..63 | 100 | -> | Plus |
3R | 24922652..24924223 | 64..1635 | 100 | -> | Plus |
3R | 24924276..24924356 | 1636..1716 | 100 | -> | Plus |
3R | 24924418..24925160 | 1717..2459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20748247..20748309 | 1..63 | 100 | -> | Plus |
arm_3R | 20748374..20749945 | 64..1635 | 100 | -> | Plus |
arm_3R | 20749998..20750078 | 1636..1716 | 100 | -> | Plus |
arm_3R | 20750140..20750882 | 1717..2459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24663483..24665054 | 64..1635 | 100 | -> | Plus |
3R | 24665107..24665187 | 1636..1716 | 100 | -> | Plus |
3R | 24665249..24665991 | 1717..2459 | 100 | Plus | |
3R | 24663356..24663418 | 1..63 | 100 | -> | Plus |
Translation from 2 to 2311
> LD43724.hyp HWHFIFKHKLKIQLKMELNIDNRPNDVGVLAPNDQENEDANRRMENTDAV KTPVARKTRRAVLKRMNATSEKNSPTHPDPPKTPGTPGHLSQNTETPRRS CRKSVRPAIDYDDIIVRSAKKAIVEALSADPEGEEPSVQKWTTAEVGKNS RKRGRKSKRMVAKKQKTEHIVAEDDEEQDTELEVPQKKVDPSQDAEGNAE VQADIVEEVALSTKKSSKKSKTKDPDHANDITDIVVNLEQPISIKKSSRA SKNPDTKEQNVADELGLCPLDMDSQEEDEKDIQGGEAKTNAEVFEDEAQT SAADTDGQKHEEKDEQADEATKPAALDKDKEVTAEDKLKEASAVDEQAEE EMPSLLMESDGLDEPNQSPLNTTYDAEDKKDFDGSVILVVSPDKQPKASS SDLDASVILVGITDMQPVVCAPKPEIPEEKPVIKVVLTTSDDQDQTLLDL PAEASPNVSKSKKSKGYRFPTPYKARPMFNFTGTEEAVHHDHEVKEDEPH YTRKRSKSASNWKDIMSRTVSFQSPIEVANVEDIDKRWAGLQKTNVNNRR RRSKSLDEKRCKMSRIPKPNRGVIPLNKTITPSKVNKRTKMPNFAAMHER QFAKMESLVDHVERKAERAKVLTNSVQKQVPGSAAKKMQSTTSVEDRARP RAMKKIDMSADRTVVMDHPSDKLNSSRLPLKATAPASNVAPKPAFNLSTS TVKTFNATFSSRPADSHDNKLAERRQRRIDMFKGRTTKDQKEKGEFIRGV RLNRRFELQMQHRRHLEED*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mink-PA | 754 | CG11120-PA | 1..754 | 16..769 | 3858 | 100 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4132..4795 | 23..703 | 178 | 20.3 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4171..4834 | 23..703 | 178 | 20.3 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4132..4795 | 23..703 | 178 | 20.3 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4171..4834 | 23..703 | 178 | 20.3 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3703..4297 | 112..727 | 176 | 20 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3742..4336 | 112..727 | 176 | 20 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3703..4297 | 112..727 | 176 | 20 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3477..4102 | 148..727 | 174 | 20.3 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3516..4141 | 148..727 | 174 | 20.3 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3477..4102 | 148..727 | 174 | 20.3 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4613..5203 | 112..743 | 165 | 19.7 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4652..5242 | 112..743 | 165 | 19.7 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4613..5203 | 112..743 | 165 | 19.7 | Plus |
Translation from 47 to 2311
> LD43724.pep MELNIDNRPNDVGVLAPNDQENEDANRRMENTDAVKTPVARKTRRAVLKR MNATSEKNSPTHPDPPKTPGTPGHLSQNTETPRRSCRKSVRPAIDYDDII VRSAKKAIVEALSADPEGEEPSVQKWTTAEVGKNSRKRGRKSKRMVAKKQ KTEHIVAEDDEEQDTELEVPQKKVDPSQDAEGNAEVQADIVEEVALSTKK SSKKSKTKDPDHANDITDIVVNLEQPISIKKSSRASKNPDTKEQNVADEL GLCPLDMDSQEEDEKDIQGGEAKTNAEVFEDEAQTSAADTDGQKHEEKDE QADEATKPAALDKDKEVTAEDKLKEASAVDEQAEEEMPSLLMESDGLDEP NQSPLNTTYDAEDKKDFDGSVILVVSPDKQPKASSSDLDASVILVGITDM QPVVCAPKPEIPEEKPVIKVVLTTSDDQDQTLLDLPAEASPNVSKSKKSK GYRFPTPYKARPMFNFTGTEEAVHHDHEVKEDEPHYTRKRSKSASNWKDI MSRTVSFQSPIEVANVEDIDKRWAGLQKTNVNNRRRRSKSLDEKRCKMSR IPKPNRGVIPLNKTITPSKVNKRTKMPNFAAMHERQFAKMESLVDHVERK AERAKVLTNSVQKQVPGSAAKKMQSTTSVEDRARPRAMKKIDMSADRTVV MDHPSDKLNSSRLPLKATAPASNVAPKPAFNLSTSTVKTFNATFSSRPAD SHDNKLAERRQRRIDMFKGRTTKDQKEKGEFIRGVRLNRRFELQMQHRRH LEED*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16313-PA | 710 | GF16313-PA | 269..710 | 248..754 | 918 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11337-PA | 751 | GG11337-PA | 1..751 | 1..754 | 2845 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mink-PA | 754 | CG11120-PA | 1..754 | 1..754 | 3858 | 100 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4132..4795 | 8..688 | 178 | 20.3 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4171..4834 | 8..688 | 178 | 20.3 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4132..4795 | 8..688 | 178 | 20.3 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4171..4834 | 8..688 | 178 | 20.3 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3703..4297 | 97..712 | 176 | 20 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3742..4336 | 97..712 | 176 | 20 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3703..4297 | 97..712 | 176 | 20 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 3742..4336 | 97..712 | 176 | 20 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3477..4102 | 133..712 | 174 | 20.3 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3516..4141 | 133..712 | 174 | 20.3 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3477..4102 | 133..712 | 174 | 20.3 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 3516..4141 | 133..712 | 174 | 20.3 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4613..5203 | 97..728 | 165 | 19.7 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4652..5242 | 97..728 | 165 | 19.7 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4613..5203 | 97..728 | 165 | 19.7 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4652..5242 | 97..728 | 165 | 19.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24434-PA | 673 | GI24434-PA | 282..671 | 334..754 | 580 | 36.1 | Plus |
Dmoj\GI24434-PA | 673 | GI24434-PA | 18..161 | 34..168 | 223 | 46.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24401-PA | 692 | GL24401-PA | 1..692 | 1..754 | 1109 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26602-PB | 634 | GA26602-PB | 8..634 | 49..754 | 913 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17771-PA | 758 | GM17771-PA | 1..758 | 1..754 | 3510 | 89.6 | Plus |
Dsec\GM26645-PA | 590 | GM26645-PA | 1..590 | 169..754 | 2708 | 89.2 | Plus |
Dsec\GM17774-PA | 117 | GM17774-PA | 1..117 | 638..754 | 595 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21147-PA | 756 | GD21147-PA | 1..756 | 1..754 | 3434 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10708-PA | 686 | GJ10708-PA | 11..684 | 13..754 | 668 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12975-PA | 698 | GK12975-PA | 24..697 | 37..754 | 838 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23532-PA | 730 | GE23532-PA | 1..730 | 1..754 | 2855 | 74 | Plus |