BDGP Sequence Production Resources |
Search the DGRC for LD43816
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 438 |
Well: | 16 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4702-RA |
Protein status: | LD43816.pep: gold |
Preliminary Size: | 1481 |
Sequenced Size: | 1354 |
Gene | Date | Evidence |
---|---|---|
CG4702 | 2001-01-01 | Release 2 assignment |
CG4702 | 2001-09-19 | Blastp of sequenced clone |
CG4702 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4702 | 2008-04-29 | Release 5.5 accounting |
CG4702 | 2008-08-15 | Release 5.9 accounting |
CG4702 | 2008-12-18 | 5.12 accounting |
1354 bp (1354 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058708
> LD43816.complete CTCCATTTAAAGCCAGTAACCACCAGCTGTAGTGCCCAGTTAAAGCCGAA CACTCTCGAATCGAAATTAACGAAAGAAAGTTGCCATCGATCCGACTGTC TCAGAAAGAGAGAGCAATTTTCGTGTGCAAAGTTTTTGGGTGAATTTTTA AGTGAATTGTGTGCTTGACAATCGCGTGCTGAAATCTGCACTTTTTCTAG TGCGACCAGCCAAACTAACTCAGCTGCAGCTGTAATTAAAATTTAAATTG CTTCGAGCTCGACAAATTAACAGACTGCAGATAAATAGACAGTAGTCATG TGGAATCAACGGAAAGTACACGCCTACCTGCTGCTCTCCATAGTAGCCAG CAATTGTCTGCTGATGACCTACGCATTTCCACAGCAGGAGGTCTATCAGA GGCAGCACCAGGTGACCCAGTCACCTGTCTACCGGGATGAGAGTGTGGCC AGAAAGTTTGCGGTGAAGCCGAATGCCTCGAAGAAGGTGGCTCTGGACGA TATCGAGGATGATTTGGAGACCAATCAGATCCAAGAGAGTGTGGGAGGAC CCGGCGGTTTCACCTGGTCTAACATGCTATCCACCGTGATGACCATGTTC TTCAACGGAGCCGTCAACTCACCAACCAAGTCCGATGATGTGGATAGTTC CATTGGCTTGGGCGGCAGTCCCTGGGCGAATGTTATCTCCATGGGTCTTC GCATCATCAACACCTTGCTGGGCGGCGGAGCCCCTAGCGATGGCATCGAT AAGGTCGACAACGGTGGATCTCCCATGCAGTTCATTCAGATCGTGATGAA CCTGCTGGACGCCCTGAAGACCTCCTTCTCGCACCGCTCCCTGACCGCCC GCTCCATGGGCAAGCGGGACTCGGTGAGCGACGCCGTCGTCGCCGGAATC TCGCTGATGAAGGGCTACGTCCGAACCTATCGCACCTCGGAGGACAAGTG CACGCAGCGGTACATGTGCGACGCCAATACGGAGTGCGTCCGTGAGATCG GCGGCAGCAGCATCTTCTGCCAGCTGGGATCTTATGCCACCAGCTATGTC CTAGGCCGCACCAGTGGCAGCAACTTCGAGGAGCTGTACGACGCCGGACG TAGAGGTCGCTCCGGATTCGACTGTCGCCAGATCTATCTGGAGTGCAACG AGGTCTAGACTTCCCAGTGGCCACCGACTGGACTCTCCCTAAAATAATTT AAATTAATTTATGACTTCCCTAGATGTTAGCTATTTATATTATTTATTTA AAAAATCTGTACTTATGGTCGCCGTAAAATGCGACTGGCTTCTAAGTTGA CAAAGAAAAGCGTTAAAAATACATGCATTAAATGACAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 7948856..7949262 | 696..290 | 2035 | 100 | Minus |
chr3R | 27901430 | chr3R | 7946977..7947281 | 1336..1032 | 1495 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 7953267..7953558 | 292..1 | 1460 | 100 | Minus |
chr3R | 27901430 | chr3R | 7947566..7947819 | 1031..778 | 1240 | 99.2 | Minus |
chr3R | 27901430 | chr3R | 7948688..7948774 | 780..694 | 435 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 12123461..12123867 | 696..290 | 2035 | 100 | Minus |
3R | 32079331 | 3R | 12121579..12121887 | 1340..1032 | 1545 | 100 | Minus |
3R | 32079331 | 3R | 12127871..12128162 | 292..1 | 1460 | 100 | Minus |
3R | 32079331 | 3R | 12122171..12122424 | 1031..778 | 1270 | 100 | Minus |
3R | 32079331 | 3R | 12123293..12123379 | 780..694 | 435 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 11864292..11864698 | 696..290 | 2035 | 100 | Minus |
3R | 31820162 | 3R | 11862410..11862718 | 1340..1032 | 1545 | 100 | Minus |
3R | 31820162 | 3R | 11868702..11868993 | 292..1 | 1460 | 100 | Minus |
3R | 31820162 | 3R | 11863002..11863255 | 1031..778 | 1270 | 100 | Minus |
3R | 31820162 | 3R | 11864124..11864210 | 780..694 | 435 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 5773..5829 | 1249..1193 | 114 | 66.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7948688..7948773 | 695..780 | 100 | <- | Minus |
chr3R | 7947566..7947816 | 781..1031 | 99 | <- | Minus |
chr3R | 7948858..7949259 | 293..694 | 100 | <- | Minus |
chr3R | 7953267..7953558 | 1..292 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4702-RA | 1..861 | 298..1158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4702-RA | 1..861 | 298..1158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4702-RA | 1..861 | 298..1158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4702-RA | 1..861 | 298..1158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4702-RA | 1..861 | 298..1158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4702-RA | 36..1371 | 1..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4702-RA | 36..1371 | 1..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4702-RA | 40..1375 | 1..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4702-RA | 36..1371 | 1..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4702-RA | 40..1375 | 1..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12123463..12123864 | 293..694 | 100 | <- | Minus |
3R | 12127871..12128162 | 1..292 | 100 | Minus | |
3R | 12121583..12121887 | 1032..1336 | 100 | <- | Minus |
3R | 12122171..12122421 | 781..1031 | 100 | <- | Minus |
3R | 12123293..12123378 | 695..780 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12123463..12123864 | 293..694 | 100 | <- | Minus |
3R | 12127871..12128162 | 1..292 | 100 | Minus | |
3R | 12121583..12121887 | 1032..1336 | 100 | <- | Minus |
3R | 12122171..12122421 | 781..1031 | 100 | <- | Minus |
3R | 12123293..12123378 | 695..780 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12123463..12123864 | 293..694 | 100 | <- | Minus |
3R | 12127871..12128162 | 1..292 | 100 | Minus | |
3R | 12121583..12121887 | 1032..1336 | 100 | <- | Minus |
3R | 12122171..12122421 | 781..1031 | 100 | <- | Minus |
3R | 12123293..12123378 | 695..780 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7947305..7947609 | 1032..1336 | 100 | <- | Minus |
arm_3R | 7947893..7948143 | 781..1031 | 100 | <- | Minus |
arm_3R | 7949015..7949100 | 695..780 | 100 | <- | Minus |
arm_3R | 7949185..7949586 | 293..694 | 100 | <- | Minus |
arm_3R | 7953593..7953884 | 1..292 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11863002..11863252 | 781..1031 | 100 | <- | Minus |
3R | 11864124..11864209 | 695..780 | 100 | <- | Minus |
3R | 11862414..11862718 | 1032..1336 | 100 | <- | Minus |
3R | 11864294..11864695 | 293..694 | 100 | <- | Minus |
3R | 11868702..11868993 | 1..292 | 100 | Minus |
Translation from 297 to 1157
> LD43816.hyp MWNQRKVHAYLLLSIVASNCLLMTYAFPQQEVYQRQHQVTQSPVYRDESV ARKFAVKPNASKKVALDDIEDDLETNQIQESVGGPGGFTWSNMLSTVMTM FFNGAVNSPTKSDDVDSSIGLGGSPWANVISMGLRIINTLLGGGAPSDGI DKVDNGGSPMQFIQIVMNLLDALKTSFSHRSLTARSMGKRDSVSDAVVAG ISLMKGYVRTYRTSEDKCTQRYMCDANTECVREIGGSSIFCQLGSYATSY VLGRTSGSNFEELYDAGRRGRSGFDCRQIYLECNEV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4702-PC | 286 | CG4702-PC | 1..286 | 1..286 | 1486 | 100 | Plus |
CG4702-PA | 286 | CG4702-PA | 1..286 | 1..286 | 1486 | 100 | Plus |
CG4702-PD | 314 | CG4702-PD | 1..314 | 1..286 | 1447 | 91.1 | Plus |
CG4702-PB | 314 | CG4702-PB | 1..314 | 1..286 | 1447 | 91.1 | Plus |
Translation from 297 to 1157
> LD43816.pep MWNQRKVHAYLLLSIVASNCLLMTYAFPQQEVYQRQHQVTQSPVYRDESV ARKFAVKPNASKKVALDDIEDDLETNQIQESVGGPGGFTWSNMLSTVMTM FFNGAVNSPTKSDDVDSSIGLGGSPWANVISMGLRIINTLLGGGAPSDGI DKVDNGGSPMQFIQIVMNLLDALKTSFSHRSLTARSMGKRDSVSDAVVAG ISLMKGYVRTYRTSEDKCTQRYMCDANTECVREIGGSSIFCQLGSYATSY VLGRTSGSNFEELYDAGRRGRSGFDCRQIYLECNEV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17745-PA | 286 | GF17745-PA | 1..286 | 1..286 | 1469 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17159-PA | 286 | GG17159-PA | 1..286 | 1..286 | 1533 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15544-PA | 318 | GH15544-PA | 1..318 | 1..286 | 1279 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4702-PC | 286 | CG4702-PC | 1..286 | 1..286 | 1486 | 100 | Plus |
CG4702-PA | 286 | CG4702-PA | 1..286 | 1..286 | 1486 | 100 | Plus |
CG4702-PD | 314 | CG4702-PD | 1..314 | 1..286 | 1447 | 91.1 | Plus |
CG4702-PB | 314 | CG4702-PB | 1..314 | 1..286 | 1447 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22477-PA | 324 | GI22477-PA | 1..324 | 1..286 | 1299 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21575-PA | 286 | GL21575-PA | 1..286 | 1..286 | 1456 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18368-PB | 286 | GA18368-PB | 1..286 | 1..286 | 1456 | 93.4 | Plus |
Dpse\GA18368-PA | 314 | GA18368-PA | 1..314 | 1..286 | 1421 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26041-PA | 286 | GM26041-PA | 1..286 | 1..286 | 1535 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20603-PA | 286 | GD20603-PA | 1..286 | 1..286 | 1538 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10076-PA | 318 | GJ10076-PA | 1..318 | 1..286 | 1274 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11568-PA | 315 | GK11568-PA | 1..315 | 1..286 | 1239 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24548-PA | 286 | GE24548-PA | 1..286 | 1..286 | 1522 | 99 | Plus |